Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27467 Striga asiatica HOM05D005947 ORTHO05D007498 9.4e-95 350.1 170 100.0
Aqoxy7G00241 Aquilegia oxysepala HOM05D005947 ORTHO05D007498 7.3e-15 84.7 123 46.3
Duzib205G0732 Durio zibethinus HOM05D005947 ORTHO05D007498 7.3e-15 84.7 97 53.6
Atru.chr1.362 Acer truncatum HOM05D005947 ORTHO05D007498 9.6e-15 84.3 97 54.6
PSO478G4027 Papaver somniferum HOM05D005947 ORTHO05D007498 9.6e-15 84.3 91 56.0
PSO782G1988 Papaver somniferum HOM05D005947 ORTHO05D007498 9.6e-15 84.3 91 56.0
THA.LOC104814930 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 9.6e-15 84.3 61 75.4
ECA232G3749 Erigeron canadensis HOM05D005947 ORTHO05D007498 1.3e-14 84.0 96 54.2
MSTRG.27089 Avicennia marina HOM05D005947 ORTHO05D007498 1.6e-14 83.6 90 56.7
Cc04_g12430 Coffea canephora HOM05D005947 ORTHO05D007498 1.6e-14 83.6 85 57.6
Duzib084G0036 Durio zibethinus HOM05D005947 ORTHO05D007498 1.6e-14 83.6 97 53.6
SGA_v2.0_scaffold60G21105 Striga asiatica HOM05D005947 ORTHO05D007498 1.6e-14 83.6 90 56.7
Cpa.g.sc107.105 Carica papaya HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 57.1
CDE11G0334 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 2.1e-14 83.2 107 51.4
Ciclev10005457m.g Citrus clementina HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
Cc02_g02400 Coffea canephora HOM05D005947 ORTHO05D007498 2.1e-14 83.2 85 57.6
COL.COLO4_10059 Corchorus olitorius HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
Migut.F00295 Erythranthe guttata HOM05D005947 ORTHO05D007498 2.1e-14 83.2 61 75.4
Eucgr.A02743 Eucalyptus grandis HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
Gohir.A08G098000 Gossypium hirsutum HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
Gohir.D08G109600 Gossypium hirsutum HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
Gorai.004G117300 Gossypium raimondii HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
SalBow4G2978 Salvia bowleyana HOM05D005947 ORTHO05D007498 2.1e-14 83.2 61 75.4
Thecc.03G183900 Theobroma cacao HOM05D005947 ORTHO05D007498 2.1e-14 83.2 91 56.0
TWI39G0764 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 2.1e-14 83.2 61 75.4
CANSAT21G1923 Cannabis sativa HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Ca_20085_v3 Cicer arietinum L. HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Dinv35250 Davidia involucrata HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Glyma.09G132300 Glycine max HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Lsat_1_v5_gn_9_56500 Lactuca sativa HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Lj1P1004T65 Lonicera japonica HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
MD07G1278700 Malus domestica HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Phvul.004G106800 Phaseolus vulgaris HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Prupe.2G300600 Prunus persica HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
QL09p012952 Quercus lobata HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
Rhsim09G0200500 Rhododendron simsii HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
RcHm_v2.0_Chr1g0378251 Rosa chinensis HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
TPR.G33515 Trifolium pratense HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
vmacro09816 Vaccinium macrocarpon HOM05D005947 ORTHO05D007498 2.8e-14 82.8 61 73.8
MSTRG.8712 Avicennia marina HOM05D005947 ORTHO05D007498 3.6e-14 82.4 61 73.8
CiPaw.05G262900 Carya illinoinensis HOM05D005947 ORTHO05D007498 3.6e-14 82.4 61 72.1
CDE02G4387 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 3.6e-14 82.4 95 52.6
ClCG01G000930 Citrullus lanatus HOM05D005947 ORTHO05D007498 3.6e-14 82.4 95 53.7
unitig_37.g11971 Utricularia gibba HOM05D005947 ORTHO05D007498 3.6e-14 82.4 61 73.8
MELO3C005838.2 Cucumis melo HOM05D005947 ORTHO05D007498 4.8e-14 82.0 95 52.6
CsaV3_5G001080 Cucumis sativus L. HOM05D005947 ORTHO05D007498 4.8e-14 82.0 95 52.6
MBI11_g04748_MAGBIO Magnolia biondii HOM05D005947 ORTHO05D007498 4.8e-14 82.0 92 52.2
Nn6g33304 Nelumbo nucifera HOM05D005947 ORTHO05D007498 4.8e-14 82.0 91 56.0
PGR042G2417 Punica granatum HOM05D005947 ORTHO05D007498 4.8e-14 82.0 91 54.9
Sed0018068 Sechium edule HOM05D005947 ORTHO05D007498 4.8e-14 82.0 61 72.1
CAN.G236.6 Capsicum annuum HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
Cfa016284 Carpinus fangiana HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 72.1
Haze_00040 Corylus avellana HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 72.1
Dinv28389 Davidia involucrata HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 72.1
Glyma.16G179200 Glycine max HOM05D005947 ORTHO05D007498 6.2e-14 81.6 59 74.6
Lalb_Chr01g0009481 Lupinus albus HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 72.1
Lalb_Chr03g0034831 Lupinus albus HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 72.1
Manes.14G022800 Manihot esculenta HOM05D005947 ORTHO05D007498 6.2e-14 81.6 95 51.6
Nitab4.5_0000084g0430 Nicotiana tabacum HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
Nitab4.5_0008851g0010 Nicotiana tabacum HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
Peaxi162Scf00444g00012 Petunia axillaris HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
Psat0ss1860g0200 Pisum sativum HOM05D005947 ORTHO05D007498 6.2e-14 81.6 59 74.6
Solyc03g007980.1 Solanum lycopersicum HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
Sopen03g003920 Solanum pennellii HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
PGSC0003DMG400010127 Solanum tuberosum HOM05D005947 ORTHO05D007498 6.2e-14 81.6 61 73.8
TAR375G0765 Trochodendron aralioides HOM05D005947 ORTHO05D007498 6.2e-14 81.6 95 53.7
DCAR_010659 Daucus carota HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 73.8
FvH4_7g30210 Fragaria vesca HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN01G2305 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN03G2555 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN03G2880 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN06G0215 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN06G1268 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN10G0541 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
FAN10G2124 Fragaria x ananassa HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
Lj2g0014936 Lotus japonicus HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 70.5
Medtr6g048300 Medicago truncatula HOM05D005947 ORTHO05D007498 8.1e-14 81.3 59 72.9
TWI14G0750 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 73.8
VMungo0464G0961 Vigna mungo HOM05D005947 ORTHO05D007498 8.1e-14 81.3 61 72.1
THA.LOC104798913 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 1.1e-13 80.9 61 72.1
Aa31LG11G3310 Aethionema arabicum HOM05D005947 ORTHO05D007498 1.4e-13 80.5 61 70.5
Aa31sc89G80 Aethionema arabicum HOM05D000041 ORTHO05D000061 1.4e-13 80.5 61 70.5
BcaB04g19841 Brassica carinata HOM05D005947 ORTHO05D007498 1.4e-13 80.5 61 70.5
Sed0027671 Sechium edule HOM05D005947 ORTHO05D007498 1.4e-13 80.5 91 54.9
arahy.Tifrunner.gnm1.ann1.4MV0VI Arachis hypogaea HOM05D005947 ORTHO05D007498 1.8e-13 80.1 61 70.5
arahy.Tifrunner.gnm1.ann1.D9DNDH Arachis hypogaea HOM05D005947 ORTHO05D007498 1.8e-13 80.1 61 70.5
Hma1.2p1_0274F.1_g110170 Hydrangea macrophylla HOM05D005947 ORTHO05D007498 1.8e-13 80.1 61 70.5
Nn1g01628 Nelumbo nucifera HOM05D005947 ORTHO05D007498 1.8e-13 80.1 61 70.5
Sabra04G0053200 Salix brachista HOM05D005947 ORTHO05D007498 1.8e-13 80.1 91 52.7
BcaNung01201 Brassica carinata HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
BcaNung01829 Brassica carinata HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
A06p34800 Brassica napus HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
C07p43700 Brassica napus HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
BolC7t44900H Brassica oleracea HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
BraA06t26407Z Brassica rapa HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
CSS0033085 Camellia sinensis var. sinensis HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
CARHR189560 Cardamine hirsuta HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
Thhalv10005713m.g Eutrema salsugineum HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
Potri.004G080100 Populus trichocarpa HOM05D005947 ORTHO05D007498 2.4e-13 79.7 91 51.6
Sp2g23290 Schrenkiella parvula HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 70.5
Sc19g0001250 Simmondsia chinensis HOM05D005947 ORTHO05D007498 2.4e-13 79.7 61 68.9
Actinidia31839 Actinidia chinensis HOM05D005947 ORTHO05D007498 4.0e-13 79.0 61 68.9
AagrBONN_evm.TU.Sc2ySwM_368.3402 Anthoceros agrestis HOM05D005947 ORTHO05D007498 5.3e-13 78.6 107 48.6
Ah.07g206580 Amaranthus hybridus HOM05D005947 ORTHO05D007498 1.2e-12 77.4 85 55.3
TAR374G0782 Trochodendron aralioides HOM05D005947 ORTHO05D007498 1.2e-12 77.4 61 70.5
AL6G35340 Arabidopsis lyrata HOM05D005947 ORTHO05D007498 1.5e-12 77.0 61 67.2
AT5G24020 Arabidopsis thaliana HOM05D005947 ORTHO05D007498 1.5e-12 77.0 61 67.2
Carub.0006s2174 Capsella rubella HOM05D005947 ORTHO05D007498 1.5e-12 77.0 61 67.2
AUR62021126 Chenopodium quinoa HOM05D005947 ORTHO05D007498 1.5e-12 77.0 61 68.9
AUR62031418 Chenopodium quinoa HOM05D005947 ORTHO05D007498 1.5e-12 77.0 61 68.9
SEGI_04763 Sequoiadendron giganteum HOM05D005947 ORTHO05D007498 2.0e-12 76.6 59 69.5
ATR0661G312 Amborella trichopoda HOM05D005947 ORTHO05D007498 2.6e-12 76.3 61 65.6
Pp3c1_24820 Physcomitrium patens HOM05D005947 ORTHO05D007498 4.5e-12 75.5 59 67.8
Pp3c2_15820 Physcomitrium patens HOM05D005947 ORTHO05D007498 4.5e-12 75.5 59 67.8
SMO364G0223 Selaginella moellendorffii HOM05D005947 ORTHO05D007498 9.9e-12 74.3 90 50.0
SGA_v2.0_scaffold32G13294 Striga asiatica HOM05D005947 ORTHO05D007498 1.7e-11 73.6 54 70.4
SGA_v2.0_scaffold3G01646 Striga asiatica HOM05D005947 ORTHO05D007498 2.2e-11 73.2 98 48.0
Os06g0106000 Oryza sativa ssp. japonica HOM05D005947 ORTHO05D007498 3.5e-09 65.9 61 57.4
Cre12.g522950 Chlamydomonas reinhardtii HOM05D005947 ORTHO05D007498 6.0e-09 65.1 65 50.8
Zm00001eb268640 Zea mays HOM05D005947 ORTHO05D007498 1.0e-08 64.3 61 57.4
Mapoly0042s0122 Marchantia polymorpha HOM05D005947 ORTHO05D007498 5.6e-07 58.5 41 70.7


User provided reference genes

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