Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 0.0e+00 1307.0 681 100.0
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 2.4e-197 693.0 717 56.9
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 1.2e-156 557.8 705 51.2
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 2.7e-129 466.8 739 44.5
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.4e-125 453.8 732 41.9
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.0e-112 411.8 731 39.1
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.1e-109 401.7 728 38.6
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 1.8e-104 384.4 752 38.8
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 9.8e-103 378.6 737 38.3
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 6.4e-102 375.9 749 37.7
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 2.7e-100 370.5 916 34.7
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 6.0e-100 369.4 738 38.2
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 8.6e-99 365.5 728 38.9
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 1.2e-97 361.7 731 37.6
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.1e-96 357.1 756 37.2
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 6.8e-96 355.9 754 37.3
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 6.4e-94 349.4 762 35.6
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 3.0e-91 340.5 806 35.7
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 5.1e-91 339.7 738 35.4
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.1e-90 338.6 690 36.8
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 7.3e-90 335.9 810 33.1
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.1e-89 334.3 763 34.9
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 8.1e-89 332.4 727 37.1
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 8.1e-89 332.4 727 37.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 8.1e-89 332.4 755 35.6
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 2.4e-88 330.9 699 37.1
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 3.1e-88 330.5 745 34.6
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 4.0e-88 330.1 740 36.2
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 6.9e-88 329.3 736 35.3
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 6.9e-88 329.3 756 35.6
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 2.0e-87 327.8 732 37.0
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.4e-87 327.0 749 34.0
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 7.6e-87 325.9 726 34.3
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 9.9e-87 325.5 739 35.0
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 4.9e-86 323.2 625 38.1
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 5.4e-85 319.7 757 34.5
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 6.0e-84 316.2 761 33.9
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 1.0e-83 315.5 741 34.4
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 3.0e-83 313.9 754 34.4
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 8.7e-83 312.4 741 33.7
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 8.7e-83 312.4 738 33.7
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 9.6e-82 308.9 743 33.5
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.6e-81 308.1 738 33.1
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 1.4e-80 305.1 723 34.4
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 6.9e-80 302.8 548 37.4
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 6.9e-80 302.8 709 34.4
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.6e-79 300.8 699 36.8
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 1.3e-78 298.5 712 35.0
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 1.7e-78 298.1 734 33.1
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 2.2e-78 297.7 730 34.1
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 8.4e-78 295.8 729 34.3
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 1.9e-77 294.7 725 34.8
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 1.9e-77 294.7 725 34.8
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 1.9e-77 294.7 725 34.8
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 5.4e-77 293.1 753 32.0
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 1.2e-76 292.0 815 33.3
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 2.7e-76 290.8 901 30.4
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.3e-75 288.5 717 33.8
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 4.3e-74 283.5 759 32.7
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 4.3e-74 283.5 759 32.7
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.6e-73 281.6 742 33.0
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 2.1e-73 281.2 714 34.5
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 8.1e-73 279.3 540 36.9
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 2.0e-71 274.6 361 47.1
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 4.9e-70 270.0 701 31.4
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 4.9e-70 270.0 702 32.9
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 2.4e-69 267.7 738 32.2
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 3.2e-69 267.3 729 31.8
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 5.5e-69 266.5 719 32.3
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 4.3e-66 256.9 711 31.2
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 7.4e-66 256.1 767 30.0
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 1.6e-65 255.0 507 35.7
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 3.1e-64 250.8 811 31.2
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 5.3e-64 250.0 724 31.5
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 9.0e-64 249.2 710 33.5
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 3.4e-63 247.3 292 46.2
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 5.8e-63 246.5 805 27.7
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 1.0e-62 245.7 741 30.5
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 4.9e-62 243.4 610 33.6
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 5.5e-61 240.0 737 29.0
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 5.5e-61 240.0 317 43.8
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 3.5e-60 237.3 757 29.2
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 7.9e-60 236.1 292 45.2
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 6.7e-59 233.0 813 27.1
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 1.5e-58 231.9 751 28.4
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 4.8e-57 226.9 527 34.7
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 9.0e-56 222.6 814 28.6
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 6.5e-54 216.5 851 27.8
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 8.5e-46 189.5 650 28.5
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 2.1e-36 158.3 604 26.5
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 4.7e-36 157.1 246 40.7
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 3.3e-34 151.0 388 34.5
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 4.1e-32 144.1 415 33.5
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 5.3e-32 143.7 683 25.6
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.2e-31 142.5 334 37.7
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 3.5e-31 141.0 154 51.3
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 2.2e-25 121.7 154 44.8
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.2e-25 121.7 150 47.3
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.2e-25 121.7 438 32.0
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 3.7e-25 120.9 150 47.3
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.5e-21 108.2 135 46.7
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 2.7e-20 104.8 164 40.9
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 4.4e-18 97.4 314 31.2
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 5.7e-18 97.1 306 31.7
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 4.1e-16 90.9 165 42.4
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 2.0e-15 88.6 288 31.2
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 2.0e-15 88.6 121 45.5
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.7e-15 88.2 166 40.4
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 1.0e-11 76.3 436 22.7
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 4.9e-09 67.4 257 28.0
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 8.3e-09 66.6 55 60.0
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 2.3e-06 58.5 199 33.7
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 3.8e-06 57.8 109 35.8
SEGI_32981 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 8.6e-06 56.6 240 28.8


User provided reference genes

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