Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 3.5e-92 341.7 179 100.0
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 2.5e-58 229.2 164 73.8
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 7.4e-58 227.6 173 70.5
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 1.8e-56 223.0 179 68.7
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 2.9e-46 189.1 165 61.2
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 5.0e-46 188.3 166 60.8
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 2.5e-42 176.0 164 57.9
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 2.5e-42 176.0 180 54.4
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 4.3e-42 175.3 175 55.4
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 4.8e-41 171.8 172 53.5
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 6.3e-41 171.4 169 56.2
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 5.3e-40 168.3 168 53.6
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 9.1e-40 167.5 180 50.0
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 1.5e-39 166.8 159 57.2
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 2.6e-39 166.0 162 55.6
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 3.4e-39 165.6 157 58.0
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 4.5e-39 165.2 176 52.8
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 5.9e-39 164.9 160 51.9
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 1.3e-38 163.7 154 56.5
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 2.2e-38 162.9 159 56.0
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 3.8e-38 162.2 171 50.3
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 5.0e-38 161.8 169 51.5
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 8.5e-38 161.0 159 54.7
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 8.5e-38 161.0 170 50.6
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 1.9e-37 159.8 159 52.2
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 2.5e-37 159.5 159 52.2
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.2e-37 159.1 159 54.7
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 4.2e-37 158.7 171 50.3
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 4.2e-37 158.7 167 54.5
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 5.5e-37 158.3 159 53.5
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 7.2e-37 157.9 161 52.2
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 9.4e-37 157.5 144 56.9
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.6e-36 155.6 159 53.5
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 4.7e-36 155.2 171 49.1
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 6.1e-36 154.8 160 51.2
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 6.1e-36 154.8 167 50.3
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 7.9e-36 154.5 157 52.2
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 7.9e-36 154.5 168 54.8
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 1.4e-35 153.7 156 52.6
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.4e-35 153.7 168 53.6
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 1.8e-35 153.3 170 49.4
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 3.0e-35 152.5 152 52.6
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 3.0e-35 152.5 160 53.1
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 5.1e-35 151.8 160 48.8
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 8.8e-35 151.0 171 48.5
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 8.8e-35 151.0 159 53.5
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 2.6e-34 149.4 163 47.9
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 2.6e-34 149.4 160 50.0
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 2.6e-34 149.4 171 48.0
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 2.6e-34 149.4 152 52.6
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 5.7e-34 148.3 159 51.6
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 5.7e-34 148.3 167 48.5
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 7.4e-34 147.9 169 47.3
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 1.7e-33 146.7 152 52.6
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 2.2e-33 146.4 159 49.1
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 3.7e-33 145.6 159 49.7
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 3.7e-33 145.6 141 55.3
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 1.4e-32 143.7 173 48.6
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 4.1e-32 142.1 152 50.7
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 7.0e-32 141.4 159 49.7
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 9.1e-32 141.0 174 46.6
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 1.2e-31 140.6 188 44.7
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.5e-31 140.2 149 51.7
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 4.5e-31 138.7 176 44.9
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 5.9e-31 138.3 160 46.9
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 5.9e-31 138.3 157 50.3
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 7.7e-31 137.9 160 47.5
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 1.7e-30 136.7 160 46.9
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 1.7e-30 136.7 224 43.3
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 5.0e-30 135.2 159 50.3
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 8.5e-30 134.4 160 45.6
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 1.1e-29 134.0 160 45.6
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 1.5e-29 133.7 187 42.8
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.5e-29 133.7 159 49.1
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 5.5e-29 131.7 162 43.8
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 1.2e-28 130.6 158 46.8
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 2.7e-28 129.4 153 47.7
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 8.0e-28 127.9 167 42.5
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 1.8e-27 126.7 100 70.0
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 1.8e-27 126.7 168 41.7
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 4.4e-26 122.1 152 42.1
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 6.3e-25 118.2 156 44.2
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 3.1e-24 115.9 146 43.2
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 1.0e-22 110.9 161 41.6
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 1.9e-21 106.7 105 55.2
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 5.5e-21 105.1 118 48.3
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.2e-20 104.0 113 51.3
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 1.6e-20 103.6 183 39.3
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.6e-20 103.6 122 51.6
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 1.0e-19 100.9 191 39.3
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 2.3e-19 99.8 151 38.4
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 6.3e-17 91.7 100 49.0
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.0e-14 84.3 123 45.5
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 1.3e-14 84.0 77 55.8
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.5e-13 80.5 85 55.3
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 2.7e-12 76.3 91 52.7
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 1.0e-11 74.3 56 66.1
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 1.2e-10 70.9 86 47.7
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 1.8e-08 63.5 72 51.4
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 5.4e-08 62.0 93 43.0
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 1.2e-07 60.8 158 27.2
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 2.7e-07 59.7 72 50.0
Oeu046777.1 Olea europaea HOM05D007367 ORTHO05D008866 1.3e-06 57.4 51 58.8
SalBow8G1593 Salvia bowleyana HOM05D000887 ORTHO05D016729 3.8e-06 55.8 52 59.6
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 5.0e-06 55.5 51 56.9
SHI32769 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 55.5 60 51.7


User provided reference genes

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