Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 2.0e-83 312.4 155 100.0
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 4.0e-76 288.1 152 94.1
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 4.0e-76 288.1 152 94.1
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.3e-74 283.1 144 97.9
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-74 282.3 144 97.9
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.7e-74 281.6 143 98.6
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.7e-74 281.6 143 98.6
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 9.2e-73 276.9 144 95.8
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-69 266.2 144 93.8
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 7.5e-67 257.3 147 89.8
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.2e-65 250.4 134 93.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.1e-63 244.6 140 90.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.1e-63 244.6 140 90.0
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 5.1e-63 244.6 140 90.0
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.6e-61 238.4 130 92.3
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 1.4e-60 236.5 140 87.9
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 3.1e-60 235.3 146 83.6
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.5e-59 233.0 140 87.1
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.5e-59 233.0 147 81.6
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.9e-58 228.0 134 85.1
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 3.2e-57 225.3 116 96.6
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.1e-56 222.6 161 73.9
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 3.0e-55 218.8 126 88.9
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 5.4e-49 198.0 113 90.3
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.7e-47 193.0 107 88.8
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 3.3e-46 188.7 99 98.0
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 3.3e-46 188.7 95 97.9
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 3.3e-46 188.7 95 97.9
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 3.3e-46 188.7 95 97.9
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 5.6e-46 188.0 95 96.8
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-45 186.8 134 73.9
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 6.2e-45 184.5 95 95.8
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 6.2e-45 184.5 95 94.7
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 4.0e-44 181.8 102 90.2
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 2.6e-43 179.1 103 88.3
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.4e-41 173.3 122 75.4
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.2e-40 170.2 95 89.5
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 2.1e-40 169.5 82 97.6
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 3.9e-39 165.2 96 83.3
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 5.1e-39 164.9 113 77.9
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 8.7e-39 164.1 95 86.3
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-37 159.8 95 87.4
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-36 156.8 95 81.1
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 3.1e-36 155.6 136 62.5
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 4.0e-36 155.2 95 80.0
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.0e-35 152.9 96 83.3
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 7.6e-35 151.0 95 82.1
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 8.4e-34 147.5 91 84.6
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.1e-33 147.1 73 98.6
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-33 146.7 95 77.9
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 1.4e-33 146.7 76 92.1
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 5.4e-33 144.8 81 88.9
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 3.9e-31 138.7 84 83.3
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 8.7e-31 137.5 122 62.3
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.1e-30 137.1 78 88.5
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.1e-30 137.1 73 91.8
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 7.4e-30 134.4 90 77.8
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 9.6e-30 134.0 67 94.0
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 2.1e-29 132.9 103 71.8
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.8e-29 131.7 83 81.9
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.4e-28 130.2 76 85.5
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.4e-28 129.4 73 89.0
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 6.5e-26 121.3 59 96.6
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.4e-25 120.2 79 78.5
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.9e-25 119.8 98 69.4
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 9.3e-25 117.5 104 64.4
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.0e-24 114.8 68 82.4
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.3e-23 113.6 66 84.8
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 3.9e-23 112.1 78 73.1
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.5e-22 110.2 64 84.4
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.5e-22 110.2 79 72.2
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.3e-22 108.6 74 68.9
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.3e-22 108.6 79 72.2
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 5.7e-22 108.2 74 68.9
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 7.4e-22 107.8 56 91.1
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 4.8e-21 105.1 54 90.7
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 6.2e-21 104.8 54 92.6
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.1e-20 104.0 56 89.3
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 1.9e-17 93.2 47 95.7
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 3.2e-17 92.4 138 47.8
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 5.5e-17 91.7 68 69.1
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.2e-16 90.5 83 59.0
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 2.7e-16 89.4 57 78.9
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-16 89.4 52 82.7
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 3.5e-16 89.0 56 78.6
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.9e-16 87.8 45 93.3
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.9e-16 87.8 45 93.3
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.0e-15 87.4 59 78.0
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.0e-15 87.4 48 85.4
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 1.0e-15 87.4 117 50.4
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.3e-15 87.0 57 71.9
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.7e-15 84.7 83 55.4
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 6.7e-15 84.7 54 75.9
Medtr7g093213 Medicago truncatula HOM05D000963 ORTHO05D005131 1.1e-14 84.0 41 97.6
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-14 83.2 53 77.4
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-14 83.2 53 77.4
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-14 83.2 53 77.4
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-14 83.2 53 77.4
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-14 83.2 53 77.4
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-14 83.2 53 77.4
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 4.3e-14 82.0 148 43.2
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.7e-14 81.6 49 85.7
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 9.7e-14 80.9 45 86.7
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 6.3e-13 78.2 45 80.0
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 2.4e-12 76.3 37 97.3
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.4e-12 76.3 41 90.2
ECA234G4679 Erigeron canadensis HOM05D000476 ORTHO05D004793 5.3e-12 75.1 37 94.6
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 5.3e-12 75.1 42 83.3
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 1.5e-11 73.6 38 94.7
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 2.6e-11 72.8 141 41.8
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 1.3e-10 70.5 47 74.5
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 1.7e-10 70.1 122 41.8
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 5.0e-10 68.6 48 70.8
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 5.0e-10 68.6 48 70.8
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 6.5e-10 68.2 36 88.9
Oeu014166.1 Olea europaea HOM05D000963 ORTHO05D005131 1.1e-09 67.4 33 97.0
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-09 66.6 32 96.9
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 3.2e-09 65.9 48 68.8
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 3.2e-09 65.9 48 68.8
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 3.2e-09 65.9 48 68.8
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 3.2e-09 65.9 48 68.8
Cfa010543 Carpinus fangiana HOM05D000963 ORTHO05D005131 4.2e-09 65.5 36 88.9
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 3.6e-08 62.4 40 70.0
Sopen09g020260 Solanum pennellii HOM05D010604 ORTHO05D012476 6.1e-08 61.6 49 61.2
PGSC0003DMG400003919 Solanum tuberosum HOM05D000963 ORTHO05D005131 7.9e-08 61.2 42 64.3
vmacro21330 Vaccinium macrocarpon HOM05D000963 ORTHO05D014445 7.9e-08 61.2 52 67.3
Oeu043433.1 Olea europaea HOM05D000963 ORTHO05D005131 2.3e-07 59.7 40 70.0
SGA_v2.0_scaffold43G16403 Striga asiatica HOM05D000457 ORTHO05D000560 2.0e-06 56.6 32 87.5
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 3.3e-06 55.8 42 71.4


User provided reference genes

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