Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 2.2e-114 415.6 210 100.0
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 2.9e-61 239.2 239 60.3
SGA_v2.0_scaffold202G41455 Striga asiatica HOM05D001070 ORTHO05D010233 8.2e-24 114.8 68 89.7
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.3e-16 90.9 162 38.3
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.2e-16 90.1 107 42.1
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 3.7e-16 89.4 107 42.1
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 3.7e-16 89.4 107 42.1
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 3.7e-16 89.4 107 42.1
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 3.7e-16 89.4 107 42.1
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 3.7e-16 89.4 107 42.1
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 3.7e-16 89.4 107 42.1
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 3.7e-16 89.4 107 42.1
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 3.7e-16 89.4 107 42.1
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.1e-15 87.8 154 34.4
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.8e-15 87.0 196 30.6
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 9.1e-15 84.7 113 38.9
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 9.1e-15 84.7 102 45.1
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.2e-14 84.3 253 30.0
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.5e-14 84.0 105 40.0
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.5e-14 84.0 105 40.0
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.5e-14 84.0 105 40.0
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 1.5e-14 84.0 105 40.0
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.5e-14 84.0 105 40.0
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.5e-14 84.0 136 36.0
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.5e-14 84.0 136 36.0
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 2.0e-14 83.6 155 36.1
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.6e-14 83.2 114 39.5
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 3.4e-14 82.8 116 38.8
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 7.7e-14 81.6 110 41.8
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 1.3e-13 80.9 166 32.5
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.7e-13 80.5 253 29.6
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 2.2e-13 80.1 147 32.7
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 2.2e-13 80.1 122 39.3
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.5e-13 78.6 107 39.3
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 6.5e-13 78.6 107 39.3
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.5e-13 78.6 107 39.3
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.9e-12 77.0 104 38.5
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.8e-10 70.5 75 41.3
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 2.0e-09 67.0 69 43.5
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.6e-09 66.6 142 32.4
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 5.7e-09 65.5 210 30.0
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 9.7e-09 64.7 64 45.3
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 3.7e-08 62.8 89 40.4
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.4e-07 60.1 124 33.1
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 1.2e-06 57.8 165 33.3
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 1.2e-06 57.8 165 33.3
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.2e-06 57.8 165 33.3
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 1.2e-06 57.8 165 33.3
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 1.2e-06 57.8 165 33.3
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.0e-06 57.0 165 33.3
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.5e-06 56.2 153 34.0
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 7.7e-06 55.1 157 33.8


User provided reference genes

Program Settings