Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold88G27298 Striga asiatica HOM05D002889 ORTHO05D028411 8.7e-93 343.6 168 100.0
SGA_v2.0_scaffold22G09805 Striga asiatica HOM05D002889 ORTHO05D028411 1.1e-66 256.9 136 95.6
SGA_v2.0_scaffold42G16158 Striga asiatica HOM05D002889 ORTHO05D003366 6.3e-19 98.2 51 94.1
SGA_v2.0_scaffold3G01589 Striga asiatica HOM05D002889 ORTHO05D003366 3.1e-18 95.9 51 92.2
unitig_899.g15235 Utricularia gibba HOM05D002889 ORTHO05D003366 5.9e-17 91.7 57 77.2
Duzib133G1137 Durio zibethinus HOM05D002889 ORTHO05D003366 1.3e-16 90.5 51 86.3
unitig_746.g26747 Utricularia gibba HOM05D002889 ORTHO05D003366 1.3e-16 90.5 51 86.3
Actinidia37570 Actinidia chinensis HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
Gohir.A07G202300 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
Gohir.D07G208500 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
Gorai.001G235400 Gossypium raimondii HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
Rhsim13G0041900 Rhododendron simsii HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
Sabra02G0192400 Salix brachista HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 86.3
Thecc.01G236600 Theobroma cacao HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
TWI14G1217 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
vmacro02730 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 2.9e-16 89.4 51 84.3
Eucgr.K03590 Eucalyptus grandis HOM05D002889 ORTHO05D003366 3.8e-16 89.0 51 82.4
Gohir.A08G192800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.8e-16 89.0 51 84.3
Gohir.D08G210800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.8e-16 89.0 51 84.3
Gorai.004G223500 Gossypium raimondii HOM05D002889 ORTHO05D003366 3.8e-16 89.0 51 84.3
RcHm_v2.0_Chr6g0285551 Rosa chinensis HOM05D002889 ORTHO05D003366 5.0e-16 88.6 51 82.4
arahy.Tifrunner.gnm1.ann1.EIAU9G Arachis hypogaea HOM05D002889 ORTHO05D003366 6.6e-16 88.2 51 84.3
MSTRG.17535 Avicennia marina HOM05D002889 ORTHO05D003366 6.6e-16 88.2 51 84.3
Gorai.001G183300 Gossypium raimondii HOM05D002889 ORTHO05D003366 6.6e-16 88.2 51 84.3
Potri.002G253200 Populus trichocarpa HOM05D002889 ORTHO05D003366 6.6e-16 88.2 51 84.3
Ah.08g213900 Amaranthus hybridus HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
EL10Ac7g17762 Beta vulgaris HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
Cc01_g17450 Coffea canephora HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
MD05G1182800 Malus domestica HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
MD10G1170900 Malus domestica HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
PGR044G2403 Punica granatum HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
Hund05497 Selenicereus undatus HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
Hund18347 Selenicereus undatus HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
GSVIVG01028491001 Vitis vinifera HOM05D002889 ORTHO05D003366 8.6e-16 87.8 51 82.4
Migut.N02247 Erythranthe guttata HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 82.4
FvH4_2g19850 Fragaria vesca HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 80.4
FAN15G1177 Fragaria x ananassa HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 80.4
FAN24G0698 Fragaria x ananassa HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 80.4
FAN27G1075 Fragaria x ananassa HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 80.4
Lj1A81G48 Lonicera japonica HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 82.4
Rhsim01G0258400 Rhododendron simsii HOM05D002889 ORTHO05D003366 1.1e-15 87.4 51 82.4
CSS0022688 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 80.4
Cpa.g.sc8.204 Carica papaya HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 80.4
Dinv43034 Davidia involucrata HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 80.4
Gohir.D07G160200 Gossypium hirsutum HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 82.4
Lalb_Chr20g0113361 Lupinus albus HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 82.4
Psat3g050160 Pisum sativum HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 82.4
Prupe.8G209400 Prunus persica HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 80.4
SalBow6G0687 Salvia bowleyana HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 80.4
THA.LOC104820061 Tarenaya hassleriana HOM05D002889 ORTHO05D003366 1.5e-15 87.0 51 80.4
arahy.Tifrunner.gnm1.ann1.PFSA3S Arachis hypogaea HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 82.4
MSTRG.12505 Avicennia marina HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
CiPaw.03G153400 Carya illinoinensis HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
CiPaw.04G108600 Carya illinoinensis HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
AUR62008857 Chenopodium quinoa HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
AUR62025387 Chenopodium quinoa HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
Lsat_1_v5_gn_8_90261 Lactuca sativa HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 1.9e-15 86.7 52 78.8
TWI23G0798 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 1.9e-15 86.7 51 80.4
Cfa002518 Carpinus fangiana HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 80.4
Haze_24745 Corylus avellana HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 80.4
DCAR_012623 Daucus carota HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 78.4
DCAR_018539 Daucus carota HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 78.4
Dinv19241 Davidia involucrata HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 80.4
Lj1g0020070 Lotus japonicus HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 82.4
Lalb_Chr25g0289711 Lupinus albus HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 82.4
Manes.13G042800 Manihot esculenta HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 80.4
QL09p043970 Quercus lobata HOM05D002889 ORTHO05D003366 2.5e-15 86.3 51 80.4
Aqoxy5G00053 Aquilegia oxysepala HOM05D002889 ORTHO05D003366 3.3e-15 85.9 51 80.4
Ca_08769_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 3.3e-15 85.9 51 80.4
Glyma.19G171200 Glycine max HOM05D002889 ORTHO05D003366 3.3e-15 85.9 51 80.4
Medtr7g099480 Medicago truncatula HOM05D002889 ORTHO05D003366 3.3e-15 85.9 51 80.4
TPR.G7556 Trifolium pratense HOM05D002889 ORTHO05D003366 3.3e-15 85.9 51 80.4
VMungo1383G1051 Vigna mungo HOM05D002889 ORTHO05D003366 3.3e-15 85.9 51 80.4
ECA236G1707 Erigeron canadensis HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 78.4
Eucgr.H00823 Eucalyptus grandis HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 80.4
Lj2C1137G6 Lonicera japonica HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 80.4
MBI10_g16806_MAGBIO Magnolia biondii HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 78.4
Manes.12G044400 Manihot esculenta HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 78.4
Nn1g03087 Nelumbo nucifera HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 78.4
Oeu017344.1 Olea europaea HOM05D002889 ORTHO05D003366 4.3e-15 85.5 51 80.4
TAR365G1138 Trochodendron aralioides HOM05D002889 ORTHO05D003366 5.6e-15 85.1 51 78.4
vmacro14774 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 5.6e-15 85.1 51 78.4
Atru.chr5.1927 Acer truncatum HOM05D002889 ORTHO05D003366 7.3e-15 84.7 51 80.4
Ciclev10018498m.g Citrus clementina HOM05D002889 ORTHO05D003366 7.3e-15 84.7 51 80.4
HanXRQChr13g0409041 Helianthus annuus HOM05D002889 ORTHO05D003366 7.3e-15 84.7 51 78.4
Lsat_1_v5_gn_9_11241 Lactuca sativa HOM05D002889 ORTHO05D003366 7.3e-15 84.7 51 76.5
Oeu015449.1 Olea europaea HOM05D002889 ORTHO05D003366 7.3e-15 84.7 51 80.4
Phvul.001G168400 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 7.3e-15 84.7 51 78.4
Glyma.10G042600 Glycine max HOM05D002889 ORTHO05D003366 9.5e-15 84.3 51 82.4
Gohir.A07G154000 Gossypium hirsutum HOM05D002889 ORTHO05D003366 9.5e-15 84.3 50 82.0
HanXRQChr10g0287251 Helianthus annuus HOM05D002889 ORTHO05D003366 9.5e-15 84.3 51 78.4
PSO170G4103 Papaver somniferum HOM05D002889 ORTHO05D003366 9.5e-15 84.3 51 78.4
PSO764G0331 Papaver somniferum HOM05D002889 ORTHO05D003366 9.5e-15 84.3 51 78.4
TAR636G2078 Trochodendron aralioides HOM05D002889 ORTHO05D003366 9.5e-15 84.3 51 78.4
ClCG09G009410 Citrullus lanatus HOM05D002889 ORTHO05D003366 1.2e-14 84.0 51 74.5
MELO3C024150.2 Cucumis melo HOM05D002889 ORTHO05D003366 1.2e-14 84.0 51 74.5
Sed0001453 Sechium edule HOM05D002889 ORTHO05D003366 1.2e-14 84.0 51 74.5
CAN.G941.45 Capsicum annuum HOM05D002889 ORTHO05D003366 1.6e-14 83.6 51 80.4
Duzib138G1300 Durio zibethinus HOM05D002889 ORTHO05D003366 2.1e-14 83.2 46 84.8
Glyma.13G130000 Glycine max HOM05D002889 ORTHO05D003366 2.1e-14 83.2 51 80.4
Solyc09g063030.4 Solanum lycopersicum HOM05D002889 ORTHO05D003366 2.1e-14 83.2 51 80.4
Sopen09g025200 Solanum pennellii HOM05D002889 ORTHO05D003366 2.1e-14 83.2 51 80.4
AT2G20190 Arabidopsis thaliana HOM05D002889 ORTHO05D003366 2.8e-14 82.8 50 80.0
Carub.0003s3449 Capsella rubella HOM05D002889 ORTHO05D003366 2.8e-14 82.8 50 80.0
CARHR110690 Cardamine hirsuta HOM05D002889 ORTHO05D003366 2.8e-14 82.8 50 80.0
CsaV3_7G025450 Cucumis sativus L. HOM05D002889 ORTHO05D003366 2.8e-14 82.8 51 72.5
Thhalv10001879m.g Eutrema salsugineum HOM05D002889 ORTHO05D003366 2.8e-14 82.8 50 80.0
Glyma.03G170000 Glycine max HOM05D002889 ORTHO05D003366 2.8e-14 82.8 51 76.5
Sp3g33430 Schrenkiella parvula HOM05D002889 ORTHO05D003366 2.8e-14 82.8 50 80.0
Aa31LG8G17120 Aethionema arabicum HOM05D002889 ORTHO05D003366 3.6e-14 82.4 50 78.0
CDE09G0867 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 3.6e-14 82.4 50 76.0
Nitab4.5_0000813g0100 Nicotiana tabacum HOM05D002889 ORTHO05D003366 3.6e-14 82.4 51 78.4
BcaB03g16811 Brassica carinata HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
BcaC04g22811 Brassica carinata HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
BcaNung04093 Brassica carinata HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
A07p00540 Brassica napus HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
A09p12740 Brassica napus HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
C07p00990 Brassica napus HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
C09p15080 Brassica napus HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
BolC9t54414H Brassica oleracea HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
BraA07t27848Z Brassica rapa HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
BraA09t36918Z Brassica rapa HOM05D002889 ORTHO05D003366 4.7e-14 82.0 50 80.0
Nn3g19858 Nelumbo nucifera HOM05D002889 ORTHO05D003366 4.7e-14 82.0 51 74.5
Sed0016475 Sechium edule HOM05D002889 ORTHO05D003366 4.7e-14 82.0 51 74.5
TAR362G1318 Trochodendron aralioides HOM05D002889 ORTHO05D003366 4.7e-14 82.0 52 75.0
VMungo0720G0228 Vigna mungo HOM05D002889 ORTHO05D003366 4.7e-14 82.0 51 76.5
BcaC06g36696 Brassica carinata HOM05D002889 ORTHO05D003366 6.1e-14 81.6 121 43.0
CAN.G503.27 Capsicum annuum HOM05D002889 ORTHO05D003366 6.1e-14 81.6 51 80.4
Solyc06g008040.3 Solanum lycopersicum HOM05D002889 ORTHO05D003366 6.1e-14 81.6 51 78.4
Sopen06g002880 Solanum pennellii HOM05D002889 ORTHO05D003366 6.1e-14 81.6 51 78.4
Ca_09624_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 8.0e-14 81.3 51 78.4
Peaxi162Scf00052g02011 Petunia axillaris HOM05D002889 ORTHO05D003366 8.0e-14 81.3 51 76.5
TPR.G35800 Trifolium pratense HOM05D002889 ORTHO05D003366 8.0e-14 81.3 51 78.4
Lj5g0008167 Lotus japonicus HOM05D002889 ORTHO05D003366 1.0e-13 80.9 51 78.4
Medtr1g069165 Medicago truncatula HOM05D002889 ORTHO05D003366 1.0e-13 80.9 51 78.4
Phvul.007G156100 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 1.0e-13 80.9 51 76.5
Psat6g064880 Pisum sativum HOM05D002889 ORTHO05D003366 1.0e-13 80.9 51 78.4
SEGI_29841 Sequoiadendron giganteum HOM05D002889 ORTHO05D003366 1.0e-13 80.9 51 72.5
BolC7t40536H Brassica oleracea HOM05D002889 ORTHO05D003366 1.4e-13 80.5 50 78.0
Nitab4.5_0002727g0040 Nicotiana tabacum HOM05D002889 ORTHO05D003366 1.8e-13 80.1 51 78.4
Nitab4.5_0003180g0050 Nicotiana tabacum HOM05D002889 ORTHO05D003366 1.8e-13 80.1 51 78.4
AL3G47890 Arabidopsis lyrata HOM05D002889 ORTHO05D003366 2.3e-13 79.7 50 78.0
PGR083G0457 Punica granatum HOM05D002889 ORTHO05D003366 2.3e-13 79.7 51 76.5
Actinidia09497 Actinidia chinensis HOM05D002889 ORTHO05D003366 3.0e-13 79.3 51 78.4
SHI47266 Sapria himalayana HOM05D002889 ORTHO05D003366 4.0e-13 79.0 51 70.6
arahy.Tifrunner.gnm1.ann1.CB4TML Arachis hypogaea HOM05D002889 ORTHO05D003366 5.2e-13 78.6 51 74.5
Peaxi162Scf00499g00610 Petunia axillaris HOM05D002889 ORTHO05D003366 6.8e-13 78.2 46 80.4
Lalb_Chr02g0152941 Lupinus albus HOM05D002889 ORTHO05D003366 8.9e-13 77.8 51 76.5
Mapoly0066s0036 Marchantia polymorpha HOM05D002889 ORTHO05D003366 8.9e-13 77.8 51 66.7
Os02g0617300 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 1.2e-12 77.4 50 70.0
Os04g0507500 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 1.2e-12 77.4 50 70.0
ATR0787G124 Amborella trichopoda HOM05D002889 ORTHO05D003366 1.5e-12 77.0 50 72.0
arahy.Tifrunner.gnm1.ann1.73DRY2 Arachis hypogaea HOM05D002889 ORTHO05D003366 2.0e-12 76.6 51 72.5
SMO308G0007 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 2.6e-12 76.3 57 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3600 Anthoceros agrestis HOM05D002889 ORTHO05D003366 4.4e-12 75.5 51 60.8
Glyma.19G060900 Glycine max HOM05D002889 ORTHO05D003366 7.5e-12 74.7 50 74.0
HPP92_027293 Vanilla planifolia HOM05D002889 ORTHO05D003366 7.5e-12 74.7 50 68.0
Zm00001eb426220 Zea mays HOM05D002889 ORTHO05D003366 7.5e-12 74.7 50 68.0
Zm00001eb077900 Zea mays HOM05D002889 ORTHO05D003366 1.3e-11 73.9 50 68.0
CDE08G0296 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 1.7e-11 73.6 51 64.7
Pp3c24_11460 Physcomitrium patens HOM05D002889 ORTHO05D003366 1.7e-11 73.6 51 64.7
Pp3c8_18290 Physcomitrium patens HOM05D002889 ORTHO05D003366 4.9e-11 72.0 51 62.7
CDE02G3724 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 6.4e-11 71.6 51 60.8
Zm00001eb116890 Zea mays HOM05D002889 ORTHO05D003366 8.3e-11 71.2 50 64.0
vmacro14019 Vaccinium macrocarpon HOM05D002889 ORTHO05D028411 1.1e-10 70.9 51 68.6
AagrBONN_evm.TU.Sc2ySwM_344.3270 Anthoceros agrestis HOM05D002889 ORTHO05D003366 3.5e-09 65.9 82 40.2
COL.COLO4_05728 Corchorus olitorius HOM05D002889 ORTHO05D003366 4.6e-09 65.5 52 61.5
Pp3c3_31820 Physcomitrium patens HOM05D002889 ORTHO05D003366 3.0e-08 62.8 51 56.9
SMO358G0024 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 1.5e-07 60.5 51 56.9
Gorai.006G054600 Gossypium raimondii HOM05D002889 ORTHO05D003366 7.3e-07 58.2 51 60.8
CSS0011024 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D028411 1.2e-06 57.4 34 79.4


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