Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold88G27242 Striga asiatica HOM05D007599 ORTHO05D009548 1.7e-61 239.2 123 100.0
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 3.7e-24 115.2 119 52.9
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 4.8e-24 114.8 120 54.2
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 2.4e-23 112.5 120 52.5
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 4.1e-23 111.7 124 52.4
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 9.0e-23 110.5 120 50.8
MSTRG.12224 Avicennia marina HOM05D007599 ORTHO05D009548 1.5e-22 109.8 114 53.5
FAN18G2966 Fragaria x ananassa HOM05D007599 ORTHO05D009548 3.4e-22 108.6 117 53.0
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 4.5e-22 108.2 120 50.8
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 4.5e-22 108.2 120 50.8
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 4.5e-22 108.2 121 52.9
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 1.3e-21 106.7 125 50.4
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 1.1e-20 103.6 123 51.2
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 1.1e-20 103.6 124 50.0
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 1.9e-20 102.8 123 48.8
FAN08G0181 Fragaria x ananassa HOM05D007599 ORTHO05D009548 6.1e-19 97.8 142 46.5
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 6.1e-19 97.8 125 48.0
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 3.9e-18 95.1 123 45.5
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 3.9e-18 95.1 123 48.0
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 2.5e-17 92.4 119 47.1
Atru.chr9.1835 Acer truncatum HOM05D007599 ORTHO05D009548 4.3e-17 91.7 121 45.5
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 2.8e-16 89.0 118 44.9
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 8.2e-16 87.4 124 46.0
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 8.2e-16 87.4 124 46.0
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 8.2e-16 87.4 120 44.2
Rhsim02G0254600 Rhododendron simsii HOM05D007599 ORTHO05D009548 1.4e-15 86.7 49 77.6
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 6.9e-15 84.3 120 43.3
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 9.1e-15 84.0 119 44.5
Sabra16G0305100 Salix brachista HOM05D007599 ORTHO05D009548 1.3e-13 80.1 44 84.1
Duzib084G0922 Durio zibethinus HOM05D007599 ORTHO05D009548 1.7e-13 79.7 117 41.0
RcHm_v2.0_Chr7g0187811 Rosa chinensis HOM05D007599 ORTHO05D009548 1.7e-13 79.7 50 76.0
Os01g0932550 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 5.0e-13 78.2 48 70.8
Mapoly0015s0046 Marchantia polymorpha HOM05D007599 ORTHO05D009548 8.5e-13 77.4 120 39.2
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 2.5e-12 75.9 120 40.8
FvH4_5g07140 Fragaria vesca HOM05D007599 ORTHO05D009548 3.2e-12 75.5 111 40.5
FAN08G0537 Fragaria x ananassa HOM05D007599 ORTHO05D009548 5.5e-12 74.7 113 38.9
TPR.G21312 Trifolium pratense HOM05D007599 ORTHO05D009548 5.5e-12 74.7 119 37.8
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 9.4e-12 73.9 102 44.1
FAN13G2393 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.7e-11 72.4 113 38.9
FvH4_5g10420 Fragaria vesca HOM05D007599 ORTHO05D009548 3.6e-11 72.0 41 78.0
COL.COLO4_10843 Corchorus olitorius HOM05D007599 ORTHO05D009548 1.0e-10 70.5 106 41.5
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 1.8e-10 69.7 119 39.5
SHI06900 Sapria himalayana HOM05D007599 ORTHO05D009548 3.9e-10 68.6 58 55.2
CAN.G567.112 Capsicum annuum HOM05D007599 ORTHO05D009548 1.7e-08 63.2 123 37.4
FAN13G0770 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.2e-08 62.8 35 80.0
FAN04G0849 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.8e-08 62.4 35 77.1
CANSAT21G1781 Cannabis sativa HOM05D007599 ORTHO05D009548 3.7e-08 62.0 35 77.1
MCO15G174 Micromonas commoda HOM05D007599 ORTHO05D009548 1.4e-07 60.1 48 52.1
PRCOL_00005458 Prasinoderma coloniale HOM05D007599 ORTHO05D009548 1.4e-07 60.1 43 53.5
TWI60G1211 Tripterygium wilfordii HOM05D007599 ORTHO05D009548 1.8e-07 59.7 33 78.8
Cre16.g650800 Chlamydomonas reinhardtii HOM05D007599 ORTHO05D009548 3.1e-07 58.9 48 45.8
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 4.1e-07 58.5 126 37.3
Nitab4.5_0000357g0300 Nicotiana tabacum HOM05D007599 ORTHO05D009548 7.0e-07 57.8 35 74.3
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 9.1e-07 57.4 120 35.8
AT1G61570 Arabidopsis thaliana HOM05D007599 ORTHO05D009548 1.2e-06 57.0 124 33.1
CDE11G1025 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 2.6e-06 55.8 121 32.2
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 2.6e-06 55.8 120 34.2
CDE09G0527 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 4.5e-06 55.1 121 32.2


User provided reference genes

Program Settings