Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 3.6e-241 837.8 412 100.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.1e-64 251.5 209 69.4
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 3.5e-63 246.5 208 68.3
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.1e-61 241.5 207 65.7
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.2e-55 221.5 207 62.8
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 7.9e-55 218.8 216 57.9
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.3e-52 211.5 209 56.9
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.6e-52 211.1 147 74.8
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.1e-52 210.7 209 56.9
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 2.8e-52 210.3 218 56.9
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 3.7e-52 209.9 227 53.3
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 4.8e-52 209.5 127 81.1
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 6.3e-52 209.1 138 73.9
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 8.2e-52 208.8 143 72.7
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 8.2e-52 208.8 114 87.7
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 8.2e-52 208.8 209 56.5
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 1.1e-51 208.4 127 81.1
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.4e-51 208.0 144 71.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 1.4e-51 208.0 144 71.5
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.4e-51 208.0 212 56.1
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 1.4e-51 208.0 212 56.1
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.4e-51 207.2 137 74.5
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.4e-51 207.2 137 74.5
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 2.4e-51 207.2 146 70.5
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 2.4e-51 207.2 132 78.0
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 3.1e-51 206.8 217 53.9
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 5.3e-51 206.1 151 69.5
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 5.3e-51 206.1 112 89.3
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 5.3e-51 206.1 143 72.7
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 6.9e-51 205.7 134 75.4
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.2e-50 204.9 144 72.9
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.2e-50 204.9 143 72.7
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.2e-50 204.9 132 77.3
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.5e-50 204.5 132 76.5
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 2.6e-50 203.8 126 78.6
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 3.4e-50 203.4 131 77.9
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 3.4e-50 203.4 122 82.0
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 5.9e-50 202.6 138 74.6
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 5.9e-50 202.6 174 62.6
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 5.9e-50 202.6 126 80.2
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 7.6e-50 202.2 119 81.5
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 7.6e-50 202.2 119 81.5
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 7.6e-50 202.2 168 63.7
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.0e-49 201.8 147 68.0
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.0e-49 201.8 145 71.7
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.3e-49 201.4 128 77.3
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.3e-49 201.4 127 74.0
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 1.3e-49 201.4 168 63.7
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.3e-49 201.4 168 63.7
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.2e-49 200.7 168 64.3
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.2e-49 200.7 119 80.7
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.2e-49 200.7 133 73.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 3.8e-49 199.9 111 86.5
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 6.5e-49 199.1 125 77.6
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 6.5e-49 199.1 128 77.3
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 8.5e-49 198.7 120 78.3
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.4e-48 198.0 116 82.8
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.4e-48 198.0 136 72.1
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.5e-48 197.2 127 74.8
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 2.5e-48 197.2 130 73.1
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 4.2e-48 196.4 127 75.6
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 4.2e-48 196.4 127 72.4
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 4.2e-48 196.4 137 72.3
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 7.2e-48 195.7 131 74.8
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 7.2e-48 195.7 131 74.8
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.2e-47 194.9 124 73.4
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.6e-47 194.5 134 72.4
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.6e-47 194.5 134 72.4
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.6e-47 194.5 134 72.4
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 1.6e-47 194.5 134 71.6
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.6e-47 194.5 134 71.6
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.1e-47 194.1 112 80.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.1e-47 194.1 118 78.8
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 2.1e-47 194.1 133 72.2
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 3.6e-47 193.4 144 67.4
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 4.6e-47 193.0 137 71.5
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 7.9e-47 192.2 127 72.4
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.0e-46 191.8 137 70.8
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.3e-46 191.4 117 78.6
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.8e-46 191.0 143 64.3
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 3.0e-46 190.3 129 70.5
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 6.7e-46 189.1 127 72.4
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 1.5e-45 188.0 134 70.1
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 1.5e-45 188.0 134 70.1
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 7.4e-45 185.7 142 63.4
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.7e-44 183.3 133 69.9
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.7e-44 183.3 133 69.9
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 5.3e-43 179.5 115 76.5
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.4e-42 176.8 142 62.7
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 6.5e-41 172.6 139 64.0
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 1.9e-40 171.0 135 63.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 4.2e-40 169.9 106 77.4
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 3.9e-38 163.3 128 63.3
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 4.1e-35 153.3 130 63.1
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 5.3e-35 152.9 147 56.5
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 2.3e-30 137.5 117 55.6
SGA_v2.0_scaffold52G19145 Striga asiatica HOM05D023076 ORTHO05D011211 8.8e-30 135.6 118 57.6
SGA_v2.0_scaffold112G31672 Striga asiatica HOM05D023076 ORTHO05D011211 1.7e-28 131.3 118 58.5
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 8.2e-28 129.0 133 54.1
SGA_v2.0_scaffold44G16592 Striga asiatica HOM05D023076 ORTHO05D011211 7.0e-27 125.9 118 56.8
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 9.1e-27 125.6 95 68.4
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.2e-26 125.2 99 62.6
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.2e-23 115.2 132 49.2
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.6e-23 114.8 101 59.4
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 4.4e-21 106.7 78 66.7
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 3.7e-20 103.6 61 80.3
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 6.8e-14 82.8 125 38.4
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.4e-11 75.1 48 70.8
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.2e-10 72.0 73 53.4
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.2e-10 72.0 149 28.2
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.6e-10 71.6 107 39.3
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 8.5e-09 65.9 100 34.0
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.5e-08 65.1 45 71.1
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.5e-08 64.3 37 75.7
SGA_v2.0_scaffold4G01951 Striga asiatica HOM05D023076 ORTHO05D011211 1.6e-07 61.6 39 69.2
SGA_v2.0_scaffold88G27236 Striga asiatica HOM05D023076 ORTHO05D011211 8.0e-07 59.3 58 51.7
ECA236G2545 Erigeron canadensis HOM05D009081 ORTHO05D000285 3.0e-06 57.4 97 37.1


User provided reference genes

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