Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 7.4e-65 250.4 124 100.0
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 9.8e-17 90.5 91 54.9
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 2.2e-16 89.4 90 54.4
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.3e-13 80.1 97 50.5
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 3.8e-13 78.6 124 41.9
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 8.5e-13 77.4 72 54.2
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.5e-12 76.6 72 50.0
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.5e-12 76.6 76 52.6
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 5.5e-12 74.7 98 40.8
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.5e-12 74.7 101 45.5
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 9.4e-12 73.9 92 43.5
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.2e-11 73.6 76 48.7
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.6e-11 73.2 123 40.7
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.7e-11 72.4 99 43.4
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 2.7e-11 72.4 82 45.1
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 4.7e-11 71.6 71 47.9
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 6.1e-11 71.2 110 40.9
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 6.1e-11 71.2 99 40.4
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.0e-10 70.5 94 40.4
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.4e-10 70.1 94 40.4
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 1.8e-10 69.7 62 54.8
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 2.3e-10 69.3 73 45.2
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 3.0e-10 68.9 71 45.1
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 3.0e-10 68.9 94 40.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 4.0e-10 68.6 69 49.3
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 5.2e-10 68.2 76 46.1
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 5.2e-10 68.2 76 46.1
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 6.8e-10 67.8 70 50.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 8.8e-10 67.4 60 56.7
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.2e-09 67.0 94 40.4
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-09 67.0 94 40.4
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.5e-09 66.6 106 38.7
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 2.6e-09 65.9 79 48.1
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 4.4e-09 65.1 82 46.3
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 4.4e-09 65.1 72 48.6
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 7.5e-09 64.3 71 47.9
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 7.5e-09 64.3 83 44.6
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 9.8e-09 63.9 50 54.0
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 9.8e-09 63.9 64 51.6
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 1.3e-08 63.5 73 47.9
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.3e-08 63.5 80 41.2
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.7e-08 63.2 77 48.1
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.2e-08 62.8 81 46.9
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 3.7e-08 62.0 82 39.0
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 4.9e-08 61.6 70 47.1
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 6.3e-08 61.2 97 37.1
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 8.3e-08 60.8 72 43.1
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 8.3e-08 60.8 82 36.6
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 8.3e-08 60.8 58 51.7
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.1e-07 60.5 77 44.2
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 1.4e-07 60.1 59 50.8
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 1.8e-07 59.7 113 39.8
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.8e-07 59.7 51 52.9
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 1.8e-07 59.7 81 43.2
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 2.4e-07 59.3 82 42.7
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.4e-07 59.3 71 40.8
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 3.1e-07 58.9 72 44.4
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 4.1e-07 58.5 64 42.2
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 5.4e-07 58.2 85 42.4
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 7.0e-07 57.8 71 40.8
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.2e-06 57.0 73 47.9
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.6e-06 56.6 95 37.9
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.6e-06 56.6 83 41.0
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 2.0e-06 56.2 82 36.6
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 4.5e-06 55.1 82 37.8
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 5.9e-06 54.7 59 45.8
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 5.9e-06 54.7 82 37.8


User provided reference genes

Program Settings