Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 2.1e-73 278.9 133 100.0
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 4.1e-53 211.5 128 72.7
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.0e-44 182.6 127 65.4
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 8.0e-41 170.6 127 60.6
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.4e-40 169.9 129 63.6
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 1.8e-40 169.5 127 60.6
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 1.8e-40 169.5 127 60.6
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 5.2e-40 167.9 131 60.3
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 2.6e-39 165.6 125 58.4
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 3.3e-39 165.2 128 59.4
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 4.4e-39 164.9 129 59.7
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 4.4e-39 164.9 125 58.4
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 5.7e-39 164.5 127 58.3
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.3e-38 163.3 128 58.6
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 2.2e-38 162.5 127 60.6
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 1.8e-37 159.5 127 59.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 1.8e-37 159.5 127 59.8
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.8e-37 159.5 128 57.0
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.8e-37 159.5 130 60.0
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.4e-37 159.1 125 58.4
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.4e-37 159.1 125 58.4
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 3.1e-37 158.7 128 57.8
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 3.1e-37 158.7 128 57.8
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 4.1e-37 158.3 126 55.6
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 5.3e-37 157.9 127 59.1
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 9.1e-37 157.1 127 59.1
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 9.1e-37 157.1 125 58.4
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 1.2e-36 156.8 126 55.6
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.2e-36 156.8 128 55.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.2e-36 156.8 128 55.5
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 1.2e-36 156.8 127 58.3
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.6e-36 156.4 127 59.1
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 2.0e-36 156.0 127 60.6
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 2.0e-36 156.0 127 59.1
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 2.0e-36 156.0 126 54.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 2.6e-36 155.6 128 54.7
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 1.0e-35 153.7 107 63.6
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 2.2e-35 152.5 126 54.8
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 3.8e-35 151.8 125 56.8
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 4.2e-34 148.3 126 57.1
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 5.5e-34 147.9 129 54.3
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 2.1e-33 146.0 126 55.6
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 3.6e-33 145.2 126 57.1
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.0e-32 143.7 126 53.2
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 8.8e-32 140.6 128 51.6
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 9.7e-31 137.1 97 66.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.3e-30 136.7 137 50.4
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 2.2e-30 136.0 126 51.6
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.2e-30 136.0 126 51.6
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 8.3e-30 134.0 125 51.2
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 1.1e-29 133.7 100 62.0
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 1.4e-29 133.3 130 47.7
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.7e-28 129.0 126 49.2
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.0e-27 127.1 146 45.9
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 5.0e-27 124.8 126 45.2
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 2.5e-26 122.5 127 47.2
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 1.6e-25 119.8 101 53.5
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.6e-25 119.8 125 46.4
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 2.7e-25 119.0 116 50.0
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 3.0e-24 115.5 125 47.2
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 4.0e-24 115.2 126 46.0
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 5.2e-24 114.8 126 43.7
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 6.8e-24 114.4 126 43.7
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 2.6e-23 112.5 129 43.4
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 4.4e-23 111.7 125 46.4
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 7.5e-23 110.9 155 40.6
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 2.8e-22 109.0 89 58.4
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 3.7e-22 108.6 89 55.1
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 2.4e-21 105.9 86 58.1
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.4e-21 105.9 100 52.0
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 2.5e-18 95.9 157 36.3
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 3.3e-18 95.5 128 36.7
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 2.3e-16 89.4 109 44.0
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 2.6e-15 85.9 151 37.1
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 4.1e-13 78.6 125 32.0
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 9.2e-13 77.4 63 52.4
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 2.7e-12 75.9 63 54.0
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.0e-11 73.9 65 49.2
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 1.3e-11 73.6 57 63.2
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 1.3e-11 73.6 63 50.8
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 3.9e-11 72.0 63 49.2
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 8.6e-11 70.9 63 49.2
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 3.3e-10 68.9 63 50.8
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 5.6e-10 68.2 63 49.2
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 7.3e-10 67.8 63 49.2
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 2.1e-09 66.2 89 43.8
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 2.3e-08 62.8 63 49.2
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 5.2e-08 61.6 125 31.2
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 8.3e-06 54.3 32 68.8
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 8.3e-06 54.3 48 54.2


User provided reference genes

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