Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold88G27211 Striga asiatica HOM05D000940 ORTHO05D000782 8.6e-57 223.4 111 100.0
SGA_v2.0_scaffold164G38160 Striga asiatica HOM05D000940 ORTHO05D000782 6.0e-26 120.9 92 73.9
Oeu001588.1 Olea europaea HOM05D000940 ORTHO05D000782 2.9e-20 102.1 97 58.8
Migut.L01330 Erythranthe guttata HOM05D000940 ORTHO05D000782 5.5e-19 97.8 94 60.6
MSTRG.678 Avicennia marina HOM05D000940 ORTHO05D000782 4.6e-18 94.7 92 60.9
MSTRG.7820 Avicennia marina HOM05D000940 ORTHO05D000782 1.3e-17 93.2 92 62.0
ECA234G3926 Erigeron canadensis HOM05D000940 ORTHO05D000782 2.3e-17 92.4 107 52.3
RcHm_v2.0_Chr4g0440331 Rosa chinensis HOM05D000940 ORTHO05D000782 3.0e-17 92.0 104 56.7
Atru.chr11.1903 Acer truncatum HOM05D000940 ORTHO05D000782 1.9e-16 89.4 103 53.4
Dinv34212 Davidia involucrata HOM05D000940 ORTHO05D000782 1.9e-16 89.4 97 55.7
CiPaw.05G138600 Carya illinoinensis HOM05D000940 ORTHO05D000782 2.5e-16 89.0 93 55.9
Lj4g0011521 Lotus japonicus HOM05D000940 ORTHO05D000782 3.3e-16 88.6 109 50.5
Prupe.1G269800 Prunus persica HOM05D000940 ORTHO05D000782 7.4e-16 87.4 95 53.7
Lalb_Chr04g0256251 Lupinus albus HOM05D000940 ORTHO05D000782 1.6e-15 86.3 111 48.6
Nn4g23076 Nelumbo nucifera HOM05D000940 ORTHO05D000782 2.2e-15 85.9 94 54.3
Lalb_Chr16g0392591 Lupinus albus HOM05D000940 ORTHO05D000782 2.8e-15 85.5 105 54.3
SalBow2G1549 Salvia bowleyana HOM05D000940 ORTHO05D000782 2.8e-15 85.5 93 58.1
SalBow2G2500 Salvia bowleyana HOM05D000940 ORTHO05D000782 2.8e-15 85.5 93 58.1
FAN07G0018 Fragaria x ananassa HOM05D000940 ORTHO05D000782 4.8e-15 84.7 106 50.9
FAN17G1268 Fragaria x ananassa HOM05D000940 ORTHO05D000782 4.8e-15 84.7 106 50.9
FAN22G1764 Fragaria x ananassa HOM05D000940 ORTHO05D000782 4.8e-15 84.7 106 50.9
Potri.001G147700 Populus trichocarpa HOM05D000940 ORTHO05D000782 6.3e-15 84.3 106 48.1
TAR629G2216 Trochodendron aralioides HOM05D000940 ORTHO05D000782 6.3e-15 84.3 94 55.3
FvH4_4g31730 Fragaria vesca HOM05D000940 ORTHO05D000782 1.1e-14 83.6 106 50.0
FAN12G2640 Fragaria x ananassa HOM05D000940 ORTHO05D000782 1.1e-14 83.6 106 50.0
Cfa009016 Carpinus fangiana HOM05D000940 ORTHO05D000782 1.8e-14 82.8 89 53.9
Glyma.01G043700 Glycine max HOM05D000940 ORTHO05D000782 3.1e-14 82.0 109 46.8
Lsat_1_v5_gn_4_8760 Lactuca sativa HOM05D000940 ORTHO05D000782 3.1e-14 82.0 106 50.0
Duzib251G0482 Durio zibethinus HOM05D000940 ORTHO05D000782 6.9e-14 80.9 93 52.7
Haze_12049 Corylus avellana HOM05D000940 ORTHO05D000782 1.2e-13 80.1 89 52.8
HanXRQChr14g0429311 Helianthus annuus HOM05D000940 ORTHO05D000782 1.2e-13 80.1 104 49.0
Nn3g17152 Nelumbo nucifera HOM05D000940 ORTHO05D000782 1.5e-13 79.7 95 51.6
Manes.05G098100 Manihot esculenta HOM05D000940 ORTHO05D000782 2.0e-13 79.3 95 51.6
QL03p065408 Quercus lobata HOM05D000940 ORTHO05D000782 2.0e-13 79.3 89 52.8
Eucgr.G02533 Eucalyptus grandis HOM05D000940 ORTHO05D000782 3.4e-13 78.6 96 54.2
PGR119G0763 Punica granatum HOM05D000940 ORTHO05D000782 4.5e-13 78.2 91 53.8
Hund25263 Selenicereus undatus HOM05D000940 ORTHO05D000782 7.6e-13 77.4 95 48.4
Cpa.g.sc183.21 Carica papaya HOM05D000940 ORTHO05D000782 1.0e-12 77.0 92 54.3
AUR62028821 Chenopodium quinoa HOM05D000940 ORTHO05D000782 1.0e-12 77.0 93 52.7
Dinv11155 Davidia involucrata HOM05D000940 ORTHO05D000782 1.0e-12 77.0 109 44.0
CsaV3_5G032460 Cucumis sativus L. HOM05D000940 ORTHO05D000782 1.7e-12 76.3 91 50.5
Lj6A793T93 Lonicera japonica HOM05D000940 ORTHO05D000782 1.7e-12 76.3 89 55.1
Medtr8g468500 Medicago truncatula HOM05D000940 ORTHO05D000782 1.7e-12 76.3 93 54.8
MELO3C012075.2 Cucumis melo HOM05D000940 ORTHO05D000782 3.8e-12 75.1 89 50.6
Duzib268G1236 Durio zibethinus HOM05D000940 ORTHO05D000782 5.0e-12 74.7 89 50.6
MD13G1077200 Malus domestica HOM05D000940 ORTHO05D000782 5.0e-12 74.7 93 52.7
Sabra01G0116100 Salix brachista HOM05D000940 ORTHO05D000782 8.5e-12 73.9 93 49.5
Sabra01G0117400 Salix brachista HOM05D000940 ORTHO05D000782 8.5e-12 73.9 93 49.5
Sc04g0008380 Simmondsia chinensis HOM05D000940 ORTHO05D000782 8.5e-12 73.9 82 50.0
TWI18G0025 Tripterygium wilfordii HOM05D000940 ORTHO05D000782 8.5e-12 73.9 94 48.9
Glyma.02G019800 Glycine max HOM05D000940 ORTHO05D000782 1.1e-11 73.6 111 44.1
Nitab4.5_0000879g0030 Nicotiana tabacum HOM05D000940 ORTHO05D000782 1.1e-11 73.6 91 53.8
Nitab4.5_0006585g0030 Nicotiana tabacum HOM05D000940 ORTHO05D000782 1.1e-11 73.6 91 53.8
Thecc.02G353400 Theobroma cacao HOM05D000940 ORTHO05D000782 1.1e-11 73.6 95 52.6
CAN.G279.18 Capsicum annuum HOM05D000940 ORTHO05D000782 1.4e-11 73.2 89 55.1
AUR62005740 Chenopodium quinoa HOM05D000940 ORTHO05D000782 1.4e-11 73.2 95 48.4
MD16G1077300 Malus domestica HOM05D000940 ORTHO05D000782 1.4e-11 73.2 91 54.9
PGSC0003DMG400017645 Solanum tuberosum HOM05D000940 ORTHO05D000782 1.4e-11 73.2 89 56.2
Psat4g133280 Pisum sativum HOM05D000940 ORTHO05D000782 1.9e-11 72.8 91 53.8
ClCG05G024490 Citrullus lanatus HOM05D000940 ORTHO05D000782 2.5e-11 72.4 89 49.4
Gohir.A03G098700 Gossypium hirsutum HOM05D000940 ORTHO05D000782 2.5e-11 72.4 90 51.1
Gohir.D02G114600 Gossypium hirsutum HOM05D000940 ORTHO05D000782 2.5e-11 72.4 90 51.1
Solyc05g007120.4 Solanum lycopersicum HOM05D000940 ORTHO05D000782 2.5e-11 72.4 89 55.1
Sopen05g003080 Solanum pennellii HOM05D000940 ORTHO05D000782 2.5e-11 72.4 89 55.1
TPR.G33249 Trifolium pratense HOM05D000940 ORTHO05D000782 3.2e-11 72.0 91 53.8
GSVIVG01020055001 Vitis vinifera HOM05D000940 ORTHO05D000782 4.2e-11 71.6 95 48.4
C05p12210 Brassica napus HOM05D000940 ORTHO05D000782 5.5e-11 71.2 111 45.0
BolC5t29973H Brassica oleracea HOM05D000940 ORTHO05D000782 5.5e-11 71.2 111 45.0
EL10Ac6g13165 Beta vulgaris HOM05D000940 ORTHO05D000782 7.2e-11 70.9 93 44.1
Ciclev10030797m.g Citrus clementina HOM05D000940 ORTHO05D000782 9.4e-11 70.5 93 47.3
Glyma.08G297400 Glycine max HOM05D000940 ORTHO05D000782 9.4e-11 70.5 94 53.2
Gorai.005G139400 Gossypium raimondii HOM05D000940 ORTHO05D000782 1.2e-10 70.1 90 50.0
Aqoxy3G00720 Aquilegia oxysepala HOM05D000940 ORTHO05D000782 1.6e-10 69.7 93 49.5
Aqoxy3G03309 Aquilegia oxysepala HOM05D000940 ORTHO05D000782 1.6e-10 69.7 90 52.2
Phvul.003G068400 Phaseolus vulgaris HOM05D000940 ORTHO05D000782 1.6e-10 69.7 94 53.2
Psat1g084920 Pisum sativum HOM05D000940 ORTHO05D000782 1.6e-10 69.7 109 41.3
vmacro16335 Vaccinium macrocarpon HOM05D000940 ORTHO05D000782 1.6e-10 69.7 89 49.4
Ca_05407_v3 Cicer arietinum L. HOM05D000940 ORTHO05D000782 2.1e-10 69.3 91 51.6
Glyma.18G124500 Glycine max HOM05D000940 ORTHO05D000782 2.1e-10 69.3 93 51.6
arahy.Tifrunner.gnm1.ann1.24MCIL Arachis hypogaea HOM05D000940 ORTHO05D000782 3.6e-10 68.6 89 50.6
arahy.Tifrunner.gnm1.ann1.58XCKB Arachis hypogaea HOM05D000940 ORTHO05D000782 3.6e-10 68.6 89 50.6
BcaB02g06491 Brassica carinata HOM05D000940 ORTHO05D000782 3.6e-10 68.6 111 44.1
CSS0002457 Camellia sinensis var. sinensis HOM05D000940 ORTHO05D000782 6.1e-10 67.8 99 47.5
CSS0010614 Camellia sinensis var. sinensis HOM05D000940 ORTHO05D000782 6.1e-10 67.8 89 49.4
Phvul.002G089300 Phaseolus vulgaris HOM05D000940 ORTHO05D000782 6.1e-10 67.8 58 63.8
BcaC05g25341 Brassica carinata HOM05D000940 ORTHO05D000782 7.9e-10 67.4 109 45.0
SalBow1G7274 Salvia bowleyana HOM05D000940 ORTHO05D000782 7.9e-10 67.4 104 41.3
Sed0022295 Sechium edule HOM05D000940 ORTHO05D000782 7.9e-10 67.4 90 51.1
VMungo0251G1587 Vigna mungo HOM05D000940 ORTHO05D000782 7.9e-10 67.4 94 52.1
A06p10420 Brassica napus HOM05D000940 ORTHO05D000782 1.4e-09 66.6 108 45.4
MBI01_g12911_MAGBIO Magnolia biondii HOM05D000940 ORTHO05D000782 1.4e-09 66.6 92 48.9
BraA06t24222Z Brassica rapa HOM05D000940 ORTHO05D000782 1.8e-09 66.2 108 45.4
SalBow1G5400 Salvia bowleyana HOM05D000940 ORTHO05D000782 2.3e-09 65.9 104 40.4
Ah.02g131330 Amaranthus hybridus HOM05D000940 ORTHO05D000782 8.8e-09 63.9 86 46.5
Peaxi162Scf00209g00220 Petunia axillaris HOM05D000940 ORTHO05D000782 8.8e-09 63.9 91 49.5
HPP92_005180 Vanilla planifolia HOM05D000940 ORTHO05D000782 8.8e-09 63.9 106 40.6
Medtr5g038600 Medicago truncatula HOM05D000940 ORTHO05D000782 1.1e-08 63.5 94 45.7
Nn4g22383 Nelumbo nucifera HOM05D000940 ORTHO05D000782 1.1e-08 63.5 85 45.9
Sp1g12760 Schrenkiella parvula HOM05D000940 ORTHO05D000782 1.5e-08 63.2 110 41.8
Aa31LG2G7490 Aethionema arabicum HOM05D000940 ORTHO05D000782 1.9e-08 62.8 111 40.5
CARHR014830 Cardamine hirsuta HOM05D000940 ORTHO05D000782 1.9e-08 62.8 109 42.2
Cc08_g07270 Coffea canephora HOM05D000940 ORTHO05D000782 1.9e-08 62.8 89 46.1
TAR622G0686 Trochodendron aralioides HOM05D000940 ORTHO05D000782 1.9e-08 62.8 88 43.2
BcaC06g34041 Brassica carinata HOM05D000940 ORTHO05D000782 2.5e-08 62.4 111 42.3
C07p33380 Brassica napus HOM05D000940 ORTHO05D000782 2.5e-08 62.4 111 42.3
BraA06t27234Z Brassica rapa HOM05D000940 ORTHO05D000782 2.5e-08 62.4 111 42.3
Manes.06G118000 Manihot esculenta HOM05D000940 ORTHO05D000782 2.5e-08 62.4 88 43.2
Actinidia15834 Actinidia chinensis HOM05D000940 ORTHO05D000782 3.3e-08 62.0 69 53.6
Lj2g0017679 Lotus japonicus HOM05D000940 ORTHO05D000782 4.3e-08 61.6 93 45.2
BolC7t43847H Brassica oleracea HOM05D000940 ORTHO05D000782 5.7e-08 61.2 111 41.4
DCAR_031046 Daucus carota HOM05D000940 ORTHO05D000782 5.7e-08 61.2 95 46.3
PSO832G2167 Papaver somniferum HOM05D000940 ORTHO05D000782 5.7e-08 61.2 91 46.2
GSVIVG01001815001 Vitis vinifera HOM05D000940 ORTHO05D000782 5.7e-08 61.2 88 45.5
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 7.4e-08 60.8 110 40.0
Nn3g16521 Nelumbo nucifera HOM05D000940 ORTHO05D000782 7.4e-08 60.8 85 44.7
A06p43490 Brassica napus HOM05D000940 ORTHO05D000782 9.7e-08 60.5 111 41.4
Rhsim12G0130900 Rhododendron simsii HOM05D000940 ORTHO05D000782 9.7e-08 60.5 91 46.2
TAR374G1469 Trochodendron aralioides HOM05D000940 ORTHO05D000782 9.7e-08 60.5 88 40.9
Dinv33359 Davidia involucrata HOM05D000161 ORTHO05D000111 1.3e-07 60.1 84 46.4
Dinv25672 Davidia involucrata HOM05D000940 ORTHO05D000782 1.7e-07 59.7 84 45.2
Actinidia25591 Actinidia chinensis HOM05D000940 ORTHO05D000782 2.2e-07 59.3 72 51.4
Aa31LG1G18620 Aethionema arabicum HOM05D000940 ORTHO05D000782 2.8e-07 58.9 89 42.7
BcaC06g31217 Brassica carinata HOM05D000940 ORTHO05D000782 2.8e-07 58.9 111 37.8
DCAR_021769 Daucus carota HOM05D000940 ORTHO05D000782 2.8e-07 58.9 88 42.0
DCAR_021772 Daucus carota HOM05D000940 ORTHO05D000782 2.8e-07 58.9 88 42.0
Hma1.2p1_0014F.1_g009680 Hydrangea macrophylla HOM05D000940 ORTHO05D000782 2.8e-07 58.9 80 45.0
TWI14G1224 Tripterygium wilfordii HOM05D000940 ORTHO05D000782 2.8e-07 58.9 88 40.9
TWI39G0293 Tripterygium wilfordii HOM05D000940 ORTHO05D000782 2.8e-07 58.9 88 39.8
Actinidia05922 Actinidia chinensis HOM05D000940 ORTHO05D000782 3.7e-07 58.5 84 45.2
TPR.G38281 Trifolium pratense HOM05D000940 ORTHO05D000782 3.7e-07 58.5 88 43.2
Lj9A477T53 Lonicera japonica HOM05D000940 ORTHO05D000782 4.8e-07 58.2 87 43.7
Thhalv10003702m.g Eutrema salsugineum HOM05D000940 ORTHO05D000782 6.3e-07 57.8 111 40.5
QL05p062209 Quercus lobata HOM05D000940 ORTHO05D000782 6.3e-07 57.8 88 38.6
QL10p004249 Quercus lobata HOM05D000940 ORTHO05D000782 6.3e-07 57.8 88 38.6
THA.LOC104798950 Tarenaya hassleriana HOM05D000940 ORTHO05D000782 8.2e-07 57.4 89 41.6
PGR142G2204 Punica granatum HOM05D000940 ORTHO05D000782 1.1e-06 57.0 84 41.7
Sp2g13880 Schrenkiella parvula HOM05D000940 ORTHO05D000782 1.1e-06 57.0 111 39.6
Atru.chr6.2522 Acer truncatum HOM05D000940 ORTHO05D000782 1.4e-06 56.6 84 42.9
Ah.11g044860 Amaranthus hybridus HOM05D000940 ORTHO05D000782 1.4e-06 56.6 88 38.6
CANSAT80G2268 Cannabis sativa HOM05D000940 ORTHO05D000782 1.4e-06 56.6 88 37.5
ClCG03G003650 Citrullus lanatus HOM05D000940 ORTHO05D000782 1.4e-06 56.6 88 40.9
CsaV3_1G009530 Cucumis sativus L. HOM05D000940 ORTHO05D000782 1.4e-06 56.6 88 40.9
Psat3g181840 Pisum sativum HOM05D000940 ORTHO05D000782 1.4e-06 56.6 84 47.6
Potri.015G093100 Populus trichocarpa HOM05D000940 ORTHO05D000782 1.4e-06 56.6 85 40.0
PGSC0003DMG402020263 Solanum tuberosum HOM05D000940 ORTHO05D000782 1.4e-06 56.6 88 43.2
CAN.G473.82 Capsicum annuum HOM05D000940 ORTHO05D000782 1.8e-06 56.2 88 43.2
Ciclev10018967m.g Citrus clementina HOM05D000940 ORTHO05D000782 1.8e-06 56.2 89 42.7
MBI08_g29458_MAGBIO Magnolia biondii HOM05D000940 ORTHO05D000782 1.8e-06 56.2 83 44.6
Potri.001G333300 Populus trichocarpa HOM05D000940 ORTHO05D000782 1.8e-06 56.2 84 42.9
QL02p071931 Quercus lobata HOM05D000940 ORTHO05D000782 1.8e-06 56.2 84 44.0
SEGI_10699 Sequoiadendron giganteum HOM05D000940 ORTHO05D000782 1.8e-06 56.2 97 41.2
MELO3C002351.2 Cucumis melo HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 40.9
Eucgr.I01661 Eucalyptus grandis HOM05D000940 ORTHO05D000782 2.4e-06 55.8 84 41.7
Lsat_1_v5_gn_4_185381 Lactuca sativa HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 42.0
Medtr7g031470 Medicago truncatula HOM05D000940 ORTHO05D000782 2.4e-06 55.8 85 44.7
Nitab4.5_0002887g0080 Nicotiana tabacum HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 43.2
PSO591G0331 Papaver somniferum HOM05D000940 ORTHO05D000782 2.4e-06 55.8 91 46.2
Peaxi162Scf00420g00447 Petunia axillaris HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 44.3
Solyc02g068060.3 Solanum lycopersicum HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 42.0
Sopen02g017170 Solanum pennellii HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 42.0
PGSC0003DMG400006923 Solanum tuberosum HOM05D000940 ORTHO05D000782 2.4e-06 55.8 88 42.0
Cpa.g.sc130.2 Carica papaya HOM05D000940 ORTHO05D000782 3.1e-06 55.5 88 39.8
HanXRQChr09g0273031 Helianthus annuus HOM05D000940 ORTHO05D000782 3.1e-06 55.5 105 34.3
Medtr6g023390 Medicago truncatula HOM05D000940 ORTHO05D000782 3.1e-06 55.5 96 39.6
Sabra15G0114700 Salix brachista HOM05D000940 ORTHO05D000782 3.1e-06 55.5 85 40.0
ClCG11G006980 Citrullus lanatus HOM05D000940 ORTHO05D000782 4.1e-06 55.1 77 44.2
Migut.H00009 Erythranthe guttata HOM05D000940 ORTHO05D000782 4.1e-06 55.1 89 39.3
Hma1.2p1_0279F.1_g112570 Hydrangea macrophylla HOM05D000940 ORTHO05D000782 4.1e-06 55.1 85 42.4
Nitab4.5_0000040g0430 Nicotiana tabacum HOM05D000940 ORTHO05D000782 4.1e-06 55.1 87 42.5
Nitab4.5_0002911g0030 Nicotiana tabacum HOM05D000940 ORTHO05D000782 4.1e-06 55.1 88 42.0
Prupe.5G153400 Prunus persica HOM05D000940 ORTHO05D000782 4.1e-06 55.1 72 44.4
MSTRG.11285 Avicennia marina HOM05D000940 ORTHO05D000782 5.3e-06 54.7 96 39.6
MSTRG.3090 Avicennia marina HOM05D000940 ORTHO05D000782 5.3e-06 54.7 80 41.2
Manes.15G158700 Manihot esculenta HOM05D000940 ORTHO05D000782 5.3e-06 54.7 76 46.1
Aqoxy5G03449 Aquilegia oxysepala HOM05D000940 ORTHO05D000782 6.9e-06 54.3 85 42.4
AT2G02780 Arabidopsis thaliana HOM05D000940 ORTHO05D000782 6.9e-06 54.3 111 37.8
CAN.G1491.1 Capsicum annuum HOM05D000940 ORTHO05D000782 6.9e-06 54.3 88 42.0
CARHR145220 Cardamine hirsuta HOM05D000940 ORTHO05D000782 6.9e-06 54.3 111 37.8
Gohir.A12G188500 Gossypium hirsutum HOM05D000940 ORTHO05D000782 6.9e-06 54.3 89 40.4
RcHm_v2.0_Chr7g0190561 Rosa chinensis HOM05D000940 ORTHO05D000782 6.9e-06 54.3 88 39.8
SGA_v2.0_scaffold18G08216 Striga asiatica HOM05D000940 ORTHO05D000782 6.9e-06 54.3 77 45.5
Cc07_g00630 Coffea canephora HOM05D000940 ORTHO05D000782 9.1e-06 53.9 84 40.5
Gohir.A07G052100 Gossypium hirsutum HOM05D000940 ORTHO05D000782 9.1e-06 53.9 88 43.2
Manes.17G105400 Manihot esculenta HOM05D000940 ORTHO05D000782 9.1e-06 53.9 86 41.9
Sabra16G0214600 Salix brachista HOM05D000940 ORTHO05D000782 9.1e-06 53.9 84 40.5
Thecc.03G126300 Theobroma cacao HOM05D000940 ORTHO05D000782 9.1e-06 53.9 89 40.4


User provided reference genes

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