Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27182 Striga asiatica HOM05D000096 ORTHO05D000045 1.7e-54 215.7 104 100.0
SGA_v2.0_scaffold49G18201 Striga asiatica HOM05D000096 ORTHO05D026191 1.3e-17 93.2 77 68.8
Lj6g0012163 Lotus japonicus HOM05D000096 ORTHO05D000045 4.6e-12 74.7 89 43.8
TPR.G27218 Trifolium pratense HOM05D000096 ORTHO05D000045 7.9e-12 73.9 90 42.2
Hma1.2p1_0877F.1_g231645 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.0e-11 73.6 78 47.4
C05p29460 Brassica napus HOM05D000096 ORTHO05D000045 2.3e-11 72.4 81 44.4
AUR62002666 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.0e-11 72.0 83 43.4
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 3.9e-11 71.6 104 37.5
HanXRQChr11g0340091 Helianthus annuus HOM05D000096 ORTHO05D000045 5.1e-11 71.2 76 46.1
Lj3g0024542 Lotus japonicus HOM05D000096 ORTHO05D000045 8.8e-11 70.5 104 34.6
TWI77G0609 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 8.8e-11 70.5 79 44.3
LjContig00095g0016956 Lotus japonicus HOM05D000096 ORTHO05D000045 2.0e-10 69.3 80 40.0
AUR62013596 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.3e-10 68.6 83 42.2
TPR.G17918 Trifolium pratense HOM05D000096 ORTHO05D000045 5.7e-10 67.8 90 37.8
Lj1g0025291 Lotus japonicus HOM05D000096 ORTHO05D000045 7.4e-10 67.4 82 42.7
Lj3g0000363 Lotus japonicus HOM05D000096 ORTHO05D000045 9.7e-10 67.0 82 42.7
C07p39820 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-09 66.6 77 42.9
Lj4g0022780 Lotus japonicus HOM05D000096 ORTHO05D000045 1.7e-09 66.2 81 39.5
AUR62034350 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.2e-09 65.9 76 43.4
COL.COLO4_00200 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.2e-09 65.9 80 37.5
Hma1.2p1_0551F.1_g177510 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.2e-09 65.9 76 42.1
Hund10101 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.2e-09 65.9 76 39.5
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 2.8e-09 65.5 81 42.0
Hund14972 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.7e-09 65.1 76 39.5
QL09p000096 Quercus lobata HOM05D000096 ORTHO05D000045 4.8e-09 64.7 81 39.5
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 4.8e-09 64.7 80 43.8
Hund25793 Selenicereus undatus HOM05D000096 ORTHO05D003441 6.3e-09 64.3 89 34.8
BolC1t02948H Brassica oleracea HOM05D000096 ORTHO05D000045 8.2e-09 63.9 76 43.4
ECA232G2807 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.2e-09 63.9 80 40.0
ECA240G2028 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.2e-09 63.9 82 39.0
C05p27580 Brassica napus HOM05D000096 ORTHO05D000045 1.1e-08 63.5 89 41.6
BolC5t31478H Brassica oleracea HOM05D000096 ORTHO05D000045 1.1e-08 63.5 89 41.6
Hund28482 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.4e-08 63.2 76 38.2
PGR031G0870 Punica granatum HOM05D000096 ORTHO05D000045 1.8e-08 62.8 82 43.9
Hund10443 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.8e-08 62.8 86 34.9
Aqoxy1G02586 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.4e-08 62.4 86 36.0
Aqoxy3G02516 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.4e-08 62.4 80 40.0
TPR.G15077 Trifolium pratense HOM05D000096 ORTHO05D000045 2.4e-08 62.4 82 37.8
AUR62026809 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.1e-08 62.0 83 38.6
Glyma.20G059700 Glycine max HOM05D000096 ORTHO05D000045 3.1e-08 62.0 79 43.0
Hund04420 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.1e-08 62.0 76 39.5
Hund10122 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.1e-08 62.0 76 36.8
TWI31G0491 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 3.1e-08 62.0 74 41.9
Ca_13753_v3 Cicer arietinum L. HOM05D000096 ORTHO05D000045 5.3e-08 61.2 86 40.7
TPR.G34078 Trifolium pratense HOM05D000096 ORTHO05D000045 6.9e-08 60.8 109 34.9
PSO675G3097 Papaver somniferum HOM05D000096 ORTHO05D000045 9.1e-08 60.5 75 41.3
BolC5t34012H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-07 60.1 104 37.5
Hund09987 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.2e-07 60.1 76 38.2
ECA236G1692 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-07 59.7 82 36.6
Hund04350 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.5e-07 59.7 76 38.2
Hund29376 Selenicereus undatus HOM05D000096 ORTHO05D000045 2.0e-07 59.3 87 34.5
Hund29377 Selenicereus undatus HOM05D000096 ORTHO05D000045 2.0e-07 59.3 87 34.5
BraA02t07904Z Brassica rapa HOM05D000096 ORTHO05D015530 2.6e-07 58.9 106 37.7
ECA236G3529 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-07 58.9 79 39.2
QL12p005470 Quercus lobata HOM05D000096 ORTHO05D000045 2.6e-07 58.9 80 35.0
THA.LOC104814022 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 2.6e-07 58.9 77 37.7
A02p28690 Brassica napus HOM05D000096 ORTHO05D000045 3.4e-07 58.5 106 37.7
Hma1.2p1_0917F.1_g236560 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 3.4e-07 58.5 76 35.5
Medtr0003s0260 Medicago truncatula HOM05D000096 ORTHO05D000045 3.4e-07 58.5 73 42.5
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 3.4e-07 58.5 76 36.8
ECA236G0125 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.5e-07 58.2 79 38.0
ECA238G1567 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.5e-07 58.2 82 34.1
Medtr0631s0010 Medicago truncatula HOM05D000096 ORTHO05D000045 4.5e-07 58.2 81 34.6
C05p35860 Brassica napus HOM05D000096 ORTHO05D000045 5.9e-07 57.8 75 42.7
BolC2t09045H Brassica oleracea HOM05D000096 ORTHO05D000045 5.9e-07 57.8 75 42.7
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 7.7e-07 57.4 76 35.5
A02p44290 Brassica napus HOM05D000096 ORTHO05D015530 1.0e-06 57.0 75 42.7
ECA233G3822 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-06 57.0 82 35.4
A06p13190 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-06 56.6 77 36.4
C02p27660 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-06 56.6 75 42.7
C03p82650 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-06 56.6 77 36.4
C04p32730 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-06 56.6 77 36.4
C05p16360 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-06 56.6 77 36.4
C05p40510 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-06 56.6 77 36.4
BolC9t55249H Brassica oleracea HOM05D000096 ORTHO05D015530 1.3e-06 56.6 75 42.7
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-06 56.6 80 35.0
TPR.G13837 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-06 56.6 76 38.2
C08p54130 Brassica napus HOM05D000096 ORTHO05D000045 1.7e-06 56.2 77 37.7
BolC8t52921H Brassica oleracea HOM05D000096 ORTHO05D000045 1.7e-06 56.2 77 37.7
ECA236G1226 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.7e-06 56.2 87 31.0
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.7e-06 56.2 86 37.2
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.7e-06 56.2 76 36.8
Hund19856 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.7e-06 56.2 73 38.4
SGA_v2.0_scaffold117G32387 Striga asiatica HOM05D000096 ORTHO05D000045 1.7e-06 56.2 43 65.1
BolC4t26682H Brassica oleracea HOM05D000096 ORTHO05D015530 2.2e-06 55.8 75 41.3
C07p10870 Brassica napus HOM05D000096 ORTHO05D000045 2.9e-06 55.5 80 43.8
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-06 55.5 72 38.9
Hma1.2p1_2176F.1_g316140 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.9e-06 55.5 72 34.7
Sp1g36550 Schrenkiella parvula HOM05D000096 ORTHO05D000045 2.9e-06 55.5 79 36.7
A03p36950 Brassica napus HOM05D000096 ORTHO05D000045 5.0e-06 54.7 81 37.0
C02p01010 Brassica napus HOM05D000096 ORTHO05D000045 5.0e-06 54.7 80 42.5
C04p45560 Brassica napus HOM05D000096 ORTHO05D000045 5.0e-06 54.7 80 42.5
C05p39990 Brassica napus HOM05D000096 ORTHO05D000045 5.0e-06 54.7 75 41.3
C07p10850 Brassica napus HOM05D000096 ORTHO05D000045 5.0e-06 54.7 80 43.8
BraA03t12857Z Brassica rapa HOM05D000096 ORTHO05D000045 5.0e-06 54.7 81 37.0
AUR62018339 Chenopodium quinoa HOM05D000096 ORTHO05D000045 5.0e-06 54.7 76 36.8
AUR62038719 Chenopodium quinoa HOM05D000096 ORTHO05D000045 5.0e-06 54.7 76 36.8
TPR.G33050 Trifolium pratense HOM05D000096 ORTHO05D000045 5.0e-06 54.7 83 34.9
BraA05t21035Z Brassica rapa HOM05D000096 ORTHO05D015530 6.5e-06 54.3 75 40.0
ECA236G4768 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.5e-06 54.3 72 34.7
Glyma.01G135100 Glycine max HOM05D000096 ORTHO05D000045 8.5e-06 53.9 81 37.0
Medtr7g027013 Medicago truncatula HOM05D000096 ORTHO05D000045 8.5e-06 53.9 76 34.2
Sp4g02360 Schrenkiella parvula HOM05D000096 ORTHO05D000045 8.5e-06 53.9 79 35.4
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-06 53.9 73 41.1


User provided reference genes

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