Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27161 Striga asiatica HOM05D000163 ORTHO05D404171 5.0e-108 394.4 196 100.0
SGA_v2.0_scaffold71G23817 Striga asiatica HOM05D000163 ORTHO05D000219 1.4e-14 84.0 191 41.4
MSTRG.22563 Avicennia marina HOM05D000163 ORTHO05D000219 1.3e-10 70.9 166 38.6
Migut.I01052 Erythranthe guttata HOM05D000163 ORTHO05D000219 2.2e-10 70.1 165 37.6
SGA_v2.0_scaffold122G33353 Striga asiatica HOM05D000163 ORTHO05D000219 4.8e-10 68.9 172 37.8
FvH4_6g34160 Fragaria vesca HOM05D000163 ORTHO05D000219 5.3e-09 65.5 188 35.1
SalBow6G3687 Salvia bowleyana HOM05D000163 ORTHO05D000219 6.9e-09 65.1 166 38.0
CSS0016145 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000219 9.1e-09 64.7 166 38.6
Cc04_g01630 Coffea canephora HOM05D000163 ORTHO05D000219 1.5e-08 63.9 184 36.4
Hma1.2p1_1401F.1_g281030 Hydrangea macrophylla HOM05D000163 ORTHO05D000219 2.0e-08 63.5 146 38.4
FAN05G0131 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.4e-08 62.8 228 32.9
PSO832G2455 Papaver somniferum HOM05D000163 ORTHO05D000219 4.5e-08 62.4 199 34.7
FAN14G3204 Fragaria x ananassa HOM05D000163 ORTHO05D000219 7.7e-08 61.6 151 34.4
RcHm_v2.0_Chr2g0144481 Rosa chinensis HOM05D000163 ORTHO05D000219 1.3e-07 60.8 180 36.1
Cc08_g10940 Coffea canephora HOM05D000163 ORTHO05D000219 1.7e-07 60.5 185 34.1
PSO063G7263 Papaver somniferum HOM05D000163 ORTHO05D000219 1.7e-07 60.5 202 34.7
Dinv12441 Davidia involucrata HOM05D000163 ORTHO05D000219 2.2e-07 60.1 186 34.4
QL05p009474 Quercus lobata HOM05D000163 ORTHO05D000219 2.2e-07 60.1 180 33.9
Gohir.A05G406800 Gossypium hirsutum HOM05D000163 ORTHO05D000219 2.9e-07 59.7 178 34.3
Duzib235G0730 Durio zibethinus HOM05D000163 ORTHO05D000219 3.8e-07 59.3 180 35.6
Gohir.D04G008800 Gossypium hirsutum HOM05D000163 ORTHO05D000219 3.8e-07 59.3 180 33.9
Gorai.012G010600 Gossypium raimondii HOM05D000163 ORTHO05D000219 3.8e-07 59.3 180 33.9
Oeu004352.1 Olea europaea HOM05D000163 ORTHO05D000219 3.8e-07 59.3 184 34.2
SGA_v2.0_scaffold198G41062 Striga asiatica HOM05D000163 ORTHO05D000219 3.8e-07 59.3 113 39.8
Actinidia32165 Actinidia chinensis HOM05D000163 ORTHO05D000219 5.0e-07 58.9 226 30.1
Nn6g35543 Nelumbo nucifera HOM05D000163 ORTHO05D000219 5.0e-07 58.9 190 32.6
Nitab4.5_0000404g0180 Nicotiana tabacum HOM05D000163 ORTHO05D000219 5.0e-07 58.9 200 32.0
CSS0020337 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000219 6.5e-07 58.5 166 34.3
Prupe.3G045000 Prunus persica HOM05D000163 ORTHO05D000219 6.5e-07 58.5 211 32.7
Zm00001eb160430 Zea mays HOM05D000163 ORTHO05D000219 6.5e-07 58.5 206 33.5
Aqoxy7G01148 Aquilegia oxysepala HOM05D000163 ORTHO05D000219 8.5e-07 58.2 180 32.8
EL10Ac2g03822 Beta vulgaris HOM05D000163 ORTHO05D000219 8.5e-07 58.2 174 33.9
Duzib168G0858 Durio zibethinus HOM05D000163 ORTHO05D000219 8.5e-07 58.2 178 36.0
Atru.chr1.3804 Acer truncatum HOM05D000163 ORTHO05D000219 1.1e-06 57.8 180 33.3
Actinidia07568 Actinidia chinensis HOM05D000163 ORTHO05D000219 1.9e-06 57.0 225 31.6
CSS0036098 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000219 1.9e-06 57.0 185 34.6
CAN.G106.5 Capsicum annuum HOM05D000163 ORTHO05D000219 1.9e-06 57.0 200 30.5
HPP92_008782 Vanilla planifolia HOM05D000163 ORTHO05D000219 1.9e-06 57.0 180 33.3
Duzib192G0080 Durio zibethinus HOM05D000163 ORTHO05D000219 2.5e-06 56.6 180 34.4
Sabra01G0155700 Salix brachista HOM05D000163 ORTHO05D000219 2.5e-06 56.6 170 34.7
FAN09G4120 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.2e-06 56.2 112 36.6
Peaxi162Scf00954g00224 Petunia axillaris HOM05D000163 ORTHO05D000219 3.2e-06 56.2 200 31.0
Sc23g0005740 Simmondsia chinensis HOM05D000163 ORTHO05D000219 3.2e-06 56.2 180 32.2
PGSC0003DMG400029298 Solanum tuberosum HOM05D000163 ORTHO05D000219 3.2e-06 56.2 185 31.4
HPP92_006465 Vanilla planifolia HOM05D000163 ORTHO05D000219 3.2e-06 56.2 193 32.6
Nitab4.5_0004966g0020 Nicotiana tabacum HOM05D000163 ORTHO05D000219 4.2e-06 55.8 185 31.9
Nitab4.5_0005105g0040 Nicotiana tabacum HOM05D000163 ORTHO05D000219 4.2e-06 55.8 144 31.2
Sopen12g031900 Solanum pennellii HOM05D000163 ORTHO05D000219 4.2e-06 55.8 180 31.7
PGSC0003DMG400004885 Solanum tuberosum HOM05D000163 ORTHO05D000219 4.2e-06 55.8 207 30.4
TAR411G0002 Trochodendron aralioides HOM05D000163 ORTHO05D000219 4.2e-06 55.8 226 31.9
TAR413G0005 Trochodendron aralioides HOM05D000163 ORTHO05D000219 4.2e-06 55.8 226 31.9
Dinv04003 Davidia involucrata HOM05D000163 ORTHO05D000219 5.5e-06 55.5 180 33.9
PGR142G3124 Punica granatum HOM05D000163 ORTHO05D000219 5.5e-06 55.5 178 31.5
AUR62038717 Chenopodium quinoa HOM05D000163 ORTHO05D000219 7.2e-06 55.1 201 31.8
COL.COLO4_30717 Corchorus olitorius HOM05D000163 ORTHO05D000219 7.2e-06 55.1 180 33.9
Nitab4.5_0000738g0060 Nicotiana tabacum HOM05D000163 ORTHO05D000219 7.2e-06 55.1 178 32.6
Solyc06g062820.4 Solanum lycopersicum HOM05D000163 ORTHO05D000219 7.2e-06 55.1 138 30.4
Actinidia03312 Actinidia chinensis HOM05D000163 ORTHO05D000219 9.4e-06 54.7 180 31.7
CAN.G208.84 Capsicum annuum HOM05D000163 ORTHO05D000219 9.4e-06 54.7 194 29.4
Solyc05g047550.4 Solanum lycopersicum HOM05D000163 ORTHO05D000219 9.4e-06 54.7 184 31.5


User provided reference genes

Program Settings