Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27159 Striga asiatica HOM05D024920 ORTHO05D023790 8.5e-137 490.3 250 100.0
SGA_v2.0_scaffold23G10207 Striga asiatica HOM05D024920 ORTHO05D023790 1.2e-85 320.5 161 98.8
SGA_v2.0_scaffold254G45216 Striga asiatica HOM05D024920 ORTHO05D023790 2.3e-81 306.2 161 94.4
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 1.2e-34 151.0 178 52.2
MSTRG.16911 Avicennia marina HOM05D024920 ORTHO05D023790 6.1e-10 68.9 94 43.6
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 7.5e-08 62.0 135 31.9
EL10Ac2g03260 Beta vulgaris HOM05D000030 ORTHO05D000009 2.8e-07 60.1 130 36.9
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 2.8e-07 60.1 95 36.8
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 2.8e-07 60.1 95 36.8
SHI01642 Sapria himalayana HOM05D000030 ORTHO05D007344 6.3e-07 58.9 225 28.9
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 8.3e-07 58.5 127 29.9
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.1e-06 58.2 95 35.8
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.4e-06 57.8 152 27.6
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.8e-06 57.4 149 28.2
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.8e-06 57.4 149 28.2
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 1.8e-06 57.4 155 31.0
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-06 57.0 107 29.9
SGA_v2.0_scaffold2G01281 Striga asiatica HOM05D017085 ORTHO05D026193 2.4e-06 57.0 130 30.0
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 5.4e-06 55.8 158 29.1
MSTRG.4308 Avicennia marina HOM05D000030 ORTHO05D000009 7.0e-06 55.5 64 50.0
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 9.2e-06 55.1 95 35.8


User provided reference genes

Program Settings