Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 1.9e-170 602.4 312 100.0
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.3e-99 366.3 331 64.0
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 3.6e-52 209.5 300 46.3
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 5.1e-46 189.1 336 39.9
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 3.5e-39 166.4 334 36.8
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 5.3e-35 152.5 323 35.3
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 3.8e-33 146.4 335 33.7
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.9e-32 144.1 304 33.9
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 4.2e-32 142.9 319 35.1
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 4.2e-32 142.9 331 33.8
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 7.1e-32 142.1 309 34.6
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 9.3e-32 141.7 307 32.2
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 9.3e-32 141.7 346 33.2
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 2.1e-31 140.6 305 34.4
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 6.0e-31 139.0 288 35.8
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.8e-30 137.5 310 35.2
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 3.0e-30 136.7 151 51.7
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 1.1e-29 134.8 314 33.1
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 7.4e-29 132.1 309 35.3
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 9.6e-29 131.7 314 31.2
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 1.3e-28 131.3 315 31.7
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 1.3e-28 131.3 318 32.4
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 2.1e-28 130.6 340 31.2
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 3.7e-28 129.8 327 30.0
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 3.7e-28 129.8 315 31.7
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 4.8e-28 129.4 319 30.4
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 4.8e-28 129.4 361 31.9
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 1.1e-27 128.3 329 33.4
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.4e-27 127.9 308 34.1
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 1.8e-27 127.5 341 30.8
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 2.4e-27 127.1 317 31.2
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 3.1e-27 126.7 333 30.0
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 4.0e-27 126.3 304 29.9
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 6.9e-27 125.6 308 30.5
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 2.0e-26 124.0 344 30.2
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 5.8e-26 122.5 340 32.6
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 9.9e-26 121.7 306 31.7
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 9.9e-26 121.7 326 30.7
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 1.7e-25 120.9 336 31.8
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 2.2e-25 120.6 335 31.9
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.9e-25 120.2 310 33.2
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 3.8e-25 119.8 361 29.6
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.4e-25 118.6 299 31.8
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 2.4e-24 117.1 318 28.6
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 5.5e-24 115.9 294 31.0
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 5.5e-24 115.9 264 35.6
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 7.1e-24 115.5 344 30.2
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 7.1e-24 115.5 307 32.9
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 9.3e-24 115.2 319 32.6
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.6e-23 114.4 343 31.8
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.6e-23 114.4 343 31.8
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.7e-23 113.6 215 38.6
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 3.5e-23 113.2 111 55.0
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.0e-22 111.7 198 41.4
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 1.8e-22 110.9 111 54.1
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 3.0e-22 110.2 287 31.0
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 5.1e-22 109.4 215 38.1
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 5.1e-22 109.4 332 31.0
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 6.7e-22 109.0 276 34.1
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 1.5e-21 107.8 374 29.9
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 7.4e-21 105.5 344 27.3
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 6.2e-20 102.4 308 28.2
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 6.2e-20 102.4 284 30.6
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 8.2e-20 102.1 305 27.9
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 1.1e-19 101.7 376 26.1
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.8e-19 100.9 178 36.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 2.4e-19 100.5 321 30.2
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 6.9e-19 99.0 351 26.5
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 2.0e-18 97.4 300 28.3
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 5.8e-18 95.9 346 24.0
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 5.8e-18 95.9 325 28.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.7e-17 94.4 291 30.2
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 2.2e-17 94.0 370 24.3
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 2.9e-17 93.6 376 26.3
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.1e-16 91.7 171 33.3
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.4e-16 91.3 306 26.8
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.4e-16 91.3 291 27.8
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.5e-16 90.5 197 38.6
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 3.2e-16 90.1 170 32.9
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 2.1e-15 87.4 165 32.1
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 7.9e-15 85.5 166 32.5
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 1.8e-14 84.3 222 30.6
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 5.1e-14 82.8 201 27.9
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 8.7e-14 82.0 317 28.7
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 1.1e-13 81.6 157 36.9
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.9e-13 80.9 283 24.4
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.9e-13 80.9 120 41.7
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 2.5e-13 80.5 165 31.5
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 3.3e-13 80.1 99 41.4
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 1.3e-12 78.2 188 27.7
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.6e-12 77.8 369 23.8
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 6.3e-12 75.9 169 32.5
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.8e-11 74.3 126 38.9
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 1.2e-10 71.6 169 31.4
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 1.2e-10 71.6 124 32.3
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 1.2e-10 71.6 163 35.0
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.8e-09 66.6 309 24.6
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 3.8e-09 66.6 322 24.5
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 1.9e-08 64.3 168 32.1
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 1.9e-08 64.3 42 61.9
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 4.2e-08 63.2 168 30.4
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 9.3e-08 62.0 78 41.0
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 1.2e-07 61.6 143 32.9
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 1.2e-07 61.6 179 30.2
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 3.6e-07 60.1 289 26.6
AUR62008166 Chenopodium quinoa HOM05D000060 ORTHO05D000082 1.3e-06 58.2 205 25.9
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 8.7e-06 55.5 157 29.9


User provided reference genes

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