Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27068 Striga asiatica HOM05D013351 ORTHO05D008918 6.7e-254 880.2 435 100.0
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 2.7e-29 134.0 113 64.6
SGA_v2.0_scaffold87G27025 Striga asiatica HOM05D013351 ORTHO05D022536 4.8e-18 96.7 125 49.6
SGA_v2.0_scaffold4G01989 Striga asiatica HOM05D026411 ORTHO05D030411 1.1e-17 95.5 51 96.1
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 4.9e-15 86.7 67 64.2
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 6.7e-12 76.3 57 64.9
SGA_v2.0_scaffold45G17201 Striga asiatica HOM05D003618 ORTHO05D404764 1.1e-11 75.5 40 95.0
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 1.0e-07 62.4 55 60.0
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 2.2e-07 61.2 52 57.7
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 2.9e-07 60.8 52 57.7
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 2.9e-07 60.8 35 74.3
SGA_v2.0_scaffold87G27069 Striga asiatica HOM05D013351 ORTHO05D403161 5.0e-07 60.1 119 40.3
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 5.0e-07 60.1 53 56.6
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 8.4e-07 59.3 34 82.4
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 1.1e-06 58.9 55 50.9
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 1.4e-06 58.5 78 46.2
SGA_v2.0_scaffold106G30713 Striga asiatica HOM05D026411 ORTHO05D030411 2.5e-06 57.8 52 55.8
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 2.5e-06 57.8 69 47.8
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 3.2e-06 57.4 56 53.6
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 4.2e-06 57.0 49 57.1
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 4.2e-06 57.0 49 57.1
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 7.2e-06 56.2 34 73.5
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 9.3e-06 55.8 34 73.5
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 9.3e-06 55.8 55 54.5


User provided reference genes

Program Settings