Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27057 Striga asiatica HOM05D000615 ORTHO05D000447 3.3e-161 571.6 287 100.0
SalBow8G0637 Salvia bowleyana HOM05D000615 ORTHO05D000447 2.0e-44 183.7 356 35.7
Ciclev10030798m.g Citrus clementina HOM05D000615 ORTHO05D000447 5.9e-41 172.2 340 32.9
Lj3A1062T96 Lonicera japonica HOM05D000615 ORTHO05D000447 1.9e-39 167.2 315 36.2
Nitab4.5_0003917g0020 Nicotiana tabacum HOM05D000615 ORTHO05D000447 4.2e-39 166.0 350 32.6
Atru.chr11.2178 Acer truncatum HOM05D000615 ORTHO05D000447 5.5e-39 165.6 346 32.1
Prupe.1G241600 Prunus persica HOM05D000615 ORTHO05D000447 9.4e-39 164.9 330 33.6
Solyc05g013860.4 Solanum lycopersicum HOM05D000615 ORTHO05D000447 6.1e-38 162.2 338 33.7
Sopen05g008790 Solanum pennellii HOM05D000615 ORTHO05D000447 1.8e-37 160.6 339 33.9
FvH4_4g25330 Fragaria vesca HOM05D000615 ORTHO05D000447 2.6e-36 156.8 333 32.7
Nitab4.5_0000229g0030 Nicotiana tabacum HOM05D000615 ORTHO05D000447 3.4e-36 156.4 367 32.2
Actinidia15116 Actinidia chinensis HOM05D000615 ORTHO05D000447 5.7e-36 155.6 334 33.2
CAN.G43.22 Capsicum annuum HOM05D000615 ORTHO05D000447 1.7e-35 154.1 325 33.5
Peaxi162Scf00128g00056 Petunia axillaris HOM05D000615 ORTHO05D000447 2.2e-35 153.7 399 30.1
FvH4_7g07630 Fragaria vesca HOM05D000615 ORTHO05D000447 2.8e-35 153.3 330 32.7
RcHm_v2.0_Chr4g0432621 Rosa chinensis HOM05D000615 ORTHO05D000447 3.7e-35 152.9 330 31.8
GSVIVG01000576001 Vitis vinifera HOM05D000615 ORTHO05D000447 3.7e-35 152.9 363 31.4
FAN10G3496 Fragaria x ananassa HOM05D000615 ORTHO05D000447 8.3e-35 151.8 349 30.7
CANSAT01G1199 Cannabis sativa HOM05D000615 ORTHO05D000447 3.1e-34 149.8 332 31.3
FAN07G1396 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.2e-33 147.9 339 31.9
HanXRQChr17g0540141 Helianthus annuus HOM05D000615 ORTHO05D000447 1.6e-33 147.5 337 32.9
TAR622G0284 Trochodendron aralioides HOM05D000615 ORTHO05D000447 2.0e-33 147.1 330 31.5
Manes.12G020200 Manihot esculenta HOM05D000615 ORTHO05D000447 7.7e-33 145.2 333 30.9
FAN06G4356 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.0e-32 144.8 336 31.2
TWI18G0878 Tripterygium wilfordii HOM05D000615 ORTHO05D000447 8.5e-32 141.7 332 30.4
Aqoxy5G03665_Aqoxy5G03666 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 9.4e-31 138.3 340 29.7
CiPaw.05G178900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.6e-30 137.5 338 28.1
AUR62005518 Chenopodium quinoa HOM05D000615 ORTHO05D000447 1.6e-30 137.5 320 31.9
Cc11_g16070 Coffea canephora HOM05D000615 ORTHO05D000447 2.1e-30 137.1 321 31.5
Potri.010G050200 Populus trichocarpa HOM05D000615 ORTHO05D000447 2.1e-30 137.1 332 29.5
Migut.E00218 Erythranthe guttata HOM05D000615 ORTHO05D000447 2.7e-30 136.7 181 47.0
DCAR_031169 Daucus carota HOM05D000615 ORTHO05D000447 4.7e-30 136.0 333 28.8
Lalb_Chr08g0230851 Lupinus albus HOM05D000615 ORTHO05D000447 6.1e-30 135.6 319 32.3
QL03p056367 Quercus lobata HOM05D000615 ORTHO05D000447 2.3e-29 133.7 320 31.2
Cfa009249 Carpinus fangiana HOM05D000615 ORTHO05D000447 4.0e-29 132.9 339 30.1
Phvul.001G256100 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 4.0e-29 132.9 344 29.1
Ah.03g133490 Amaranthus hybridus HOM05D000615 ORTHO05D000447 5.2e-29 132.5 317 32.5
Duzib268G0349 Durio zibethinus HOM05D000615 ORTHO05D000447 6.8e-29 132.1 331 29.3
Sabra10G0019400 Salix brachista HOM05D000615 ORTHO05D000447 8.8e-29 131.7 342 27.8
Glyma.11G244200 Glycine max HOM05D000615 ORTHO05D000447 1.2e-28 131.3 364 29.4
CSS0013718 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 1.5e-28 131.0 340 31.8
AUR62024224 Chenopodium quinoa HOM05D000615 ORTHO05D000447 7.5e-28 128.6 332 31.3
FAN22G0970 Fragaria x ananassa HOM05D000615 ORTHO05D000447 9.8e-28 128.3 303 30.7
FAN12G1729 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.7e-27 127.5 371 28.0
PGSC0003DMG400016972 Solanum tuberosum HOM05D000615 ORTHO05D000447 2.2e-27 127.1 326 30.1
Sc14g0008810 Simmondsia chinensis HOM05D000615 ORTHO05D000447 6.3e-27 125.6 302 29.1
unitig_21.g20400 Utricularia gibba HOM05D000615 ORTHO05D000447 1.8e-26 124.0 320 29.7
VMungo1383G3496 Vigna mungo HOM05D000615 ORTHO05D000447 3.1e-26 123.2 352 28.4
ECA246G5141 Erigeron canadensis HOM05D000615 ORTHO05D000447 7.0e-26 122.1 310 30.3
Lsat_1_v5_gn_3_30081 Lactuca sativa HOM05D000615 ORTHO05D000447 7.0e-26 122.1 333 30.3
THA.LOC104805029 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 1.2e-25 121.3 329 28.0
THA.LOC104825547 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 1.2e-25 121.3 329 28.0
Thecc.02G265800 Theobroma cacao HOM05D000615 ORTHO05D000447 1.6e-25 120.9 330 30.0
Gorai.005G175300 Gossypium raimondii HOM05D000615 ORTHO05D000447 4.5e-25 119.4 332 29.5
COL.COLO4_23504 Corchorus olitorius HOM05D000615 ORTHO05D000447 5.9e-25 119.0 299 32.1
BcaC08g46206 Brassica carinata HOM05D000615 ORTHO05D000447 7.7e-25 118.6 337 27.6
C06p42180 Brassica napus HOM05D000615 ORTHO05D000447 7.7e-25 118.6 337 27.6
Gohir.D02G156500 Gossypium hirsutum HOM05D000615 ORTHO05D000447 1.3e-24 117.9 333 29.7
BolC6t39206H Brassica oleracea HOM05D000615 ORTHO05D000447 1.7e-24 117.5 350 27.4
FAN17G0971 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.7e-24 117.5 309 29.1
vmacro16166 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 1.5e-23 114.4 296 30.7
BcaB03g15157 Brassica carinata HOM05D000615 ORTHO05D000447 4.2e-23 112.8 339 26.8
CSS0035695 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 5.5e-23 112.5 317 30.6
Dinv14747 Davidia involucrata HOM05D000615 ORTHO05D000447 5.5e-23 112.5 164 39.6
Eucgr.B03242 Eucalyptus grandis HOM05D000615 ORTHO05D000447 1.6e-22 110.9 317 28.7
PGR102G3023 Punica granatum HOM05D000615 ORTHO05D000447 1.6e-22 110.9 223 32.3
arahy.Tifrunner.gnm1.ann1.90SEXW Arachis hypogaea HOM05D000615 ORTHO05D000447 2.1e-22 110.5 342 26.3
A07p34350 Brassica napus HOM05D000615 ORTHO05D000447 4.7e-22 109.4 337 27.0
BraA07t31065Z Brassica rapa HOM05D000615 ORTHO05D000447 3.0e-21 106.7 337 26.4
CSS0050194 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 2.6e-20 103.6 331 27.8
PSO063G5069 Papaver somniferum HOM05D000615 ORTHO05D000447 3.2e-18 96.7 161 36.0
Cpa.g.sc33.71 Carica papaya HOM05D000615 ORTHO05D000447 7.0e-18 95.5 328 26.2
AT1G67790 Arabidopsis thaliana HOM05D000615 ORTHO05D000447 5.9e-17 92.4 342 25.7
Haze_12283 Corylus avellana HOM05D000615 ORTHO05D000447 7.8e-17 92.0 389 25.4
MBI10_g30158_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 1.7e-16 90.9 341 24.9
CSS0030838 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 2.9e-16 90.1 340 25.6
Hund06046 Selenicereus undatus HOM05D000615 ORTHO05D000447 2.9e-16 90.1 157 34.4
AL2G26530 Arabidopsis lyrata HOM05D000615 ORTHO05D000447 3.9e-16 89.7 256 28.1
Carub.0002s1424 Capsella rubella HOM05D000615 ORTHO05D000447 3.9e-16 89.7 344 24.4
MD16G1104700 Malus domestica HOM05D000615 ORTHO05D000447 6.6e-16 89.0 283 28.3
Thecc.03G118300 Theobroma cacao HOM05D000615 ORTHO05D000447 7.3e-15 85.5 328 25.0
Sp5g22800 Schrenkiella parvula HOM05D000615 ORTHO05D000447 3.6e-14 83.2 284 26.4
Cpa.g.sc33.72 Carica papaya HOM05D000615 ORTHO05D000447 4.0e-13 79.7 353 25.2
Eucgr.I01714 Eucalyptus grandis HOM05D000615 ORTHO05D000447 4.0e-13 79.7 351 24.5
Gorai.007G041500 Gossypium raimondii HOM05D000615 ORTHO05D000447 4.0e-13 79.7 339 24.5
Rhsim08G0047900 Rhododendron simsii HOM05D000615 ORTHO05D000447 4.0e-13 79.7 348 24.4
Solyc03g111815.1 Solanum lycopersicum HOM05D000615 ORTHO05D000447 4.0e-13 79.7 332 22.3
Gohir.D11G038600 Gossypium hirsutum HOM05D000615 ORTHO05D000447 6.8e-13 79.0 339 24.5
TPR.G24769 Trifolium pratense HOM05D000615 ORTHO05D000447 6.8e-13 79.0 322 23.3
Nn3g16647 Nelumbo nucifera HOM05D000615 ORTHO05D000447 2.0e-12 77.4 313 22.0
Gohir.D03G168300 Gossypium hirsutum HOM05D000615 ORTHO05D000447 2.6e-12 77.0 338 24.6
Rhsim08G0047800 Rhododendron simsii HOM05D000615 ORTHO05D000447 3.4e-12 76.6 349 23.8
Ca_16113_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 5.8e-12 75.9 322 23.3
Thhalv10019754m.g Eutrema salsugineum HOM05D000615 ORTHO05D000447 5.8e-12 75.9 78 47.4
Sabra16G0221000 Salix brachista HOM05D000615 ORTHO05D000447 7.5e-12 75.5 325 24.0
GSVIVG01032348001 Vitis vinifera HOM05D000615 ORTHO05D000447 9.8e-12 75.1 331 25.7
ATR0199G005 Amborella trichopoda HOM05D000615 ORTHO05D000447 1.3e-11 74.7 332 24.7
Lalb_Chr02g0150441 Lupinus albus HOM05D000615 ORTHO05D000447 1.3e-11 74.7 327 27.2
MSTRG.13338 Avicennia marina HOM05D000615 ORTHO05D000447 2.2e-11 73.9 78 50.0
COL.COLO4_19797 Corchorus olitorius HOM05D000615 ORTHO05D000447 2.2e-11 73.9 335 23.9
Duzib068G0484 Durio zibethinus HOM05D000615 ORTHO05D000447 2.2e-11 73.9 328 23.8
CSS0035093 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 3.7e-11 73.2 305 24.9
Gorai.003G178000 Gossypium raimondii HOM05D000615 ORTHO05D000447 3.7e-11 73.2 338 24.0
Hma1.2p1_0054F.1_g031000 Hydrangea macrophylla HOM05D000615 ORTHO05D000447 6.4e-11 72.4 152 31.6
Psat0s1411g0080 Pisum sativum HOM05D000615 ORTHO05D000447 6.4e-11 72.4 324 23.1
AUR62024223 Chenopodium quinoa HOM05D000615 ORTHO05D000447 8.3e-11 72.0 350 23.7
Potri.001G340200 Populus trichocarpa HOM05D000615 ORTHO05D000447 8.3e-11 72.0 340 24.7
TPR.G1135 Trifolium pratense HOM05D000615 ORTHO05D000447 8.3e-11 72.0 324 23.5
ECA234G3033 Erigeron canadensis HOM05D000615 ORTHO05D000447 1.1e-10 71.6 336 26.2
Lalb_Chr11g0069901 Lupinus albus HOM05D000615 ORTHO05D000447 1.1e-10 71.6 323 22.0
Manes.15G153400 Manihot esculenta HOM05D000615 ORTHO05D000447 1.4e-10 71.2 322 24.5
Dinv16547 Davidia involucrata HOM05D000615 ORTHO05D000447 1.9e-10 70.9 322 25.2
PSO067G0095 Papaver somniferum HOM05D000615 ORTHO05D000447 1.9e-10 70.9 336 23.8
Aqoxy3G01292 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 2.4e-10 70.5 326 21.5
MBI06_g02333_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 2.4e-10 70.5 332 25.3
Medtr7g032660 Medicago truncatula HOM05D000615 ORTHO05D000447 2.4e-10 70.5 324 23.5
PSO063G0386 Papaver somniferum HOM05D000615 ORTHO05D000447 2.4e-10 70.5 335 24.2
CSS0044624 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 3.2e-10 70.1 335 23.9
Gorai.003G177800 Gossypium raimondii HOM05D000615 ORTHO05D000447 3.2e-10 70.1 338 23.7
Ca_29630_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 4.1e-10 69.7 257 28.0
Gohir.D03G168100 Gossypium hirsutum HOM05D000615 ORTHO05D000447 4.1e-10 69.7 338 23.7
Potri.017G071000 Populus trichocarpa HOM05D000615 ORTHO05D000447 4.1e-10 69.7 308 24.4
Gohir.D03G102400 Gossypium hirsutum HOM05D000615 ORTHO05D000447 5.4e-10 69.3 324 24.7
CSS0024906 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 7.0e-10 68.9 335 23.6
Ca_26929_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 7.0e-10 68.9 325 24.0
Ciclev10019109m.g Citrus clementina HOM05D000615 ORTHO05D000447 7.0e-10 68.9 331 23.9
Dinv27420 Davidia involucrata HOM05D000615 ORTHO05D000447 9.2e-10 68.6 335 25.4
Gohir.A03G004100 Gossypium hirsutum HOM05D000615 ORTHO05D000447 9.2e-10 68.6 331 22.4
Gohir.A03G004400 Gossypium hirsutum HOM05D000615 ORTHO05D000447 9.2e-10 68.6 338 23.7
Ciclev10019128m.g Citrus clementina HOM05D000615 ORTHO05D000447 1.2e-09 68.2 366 24.6
Cfa004436 Carpinus fangiana HOM05D000615 ORTHO05D000447 2.0e-09 67.4 258 27.9
Cfa009516 Carpinus fangiana HOM05D000615 ORTHO05D000447 2.0e-09 67.4 330 24.2
Hund05611 Selenicereus undatus HOM05D000615 ORTHO05D000447 2.0e-09 67.4 326 25.2
CSS0024865 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 2.7e-09 67.0 302 23.8
Sabra16G0220500 Salix brachista HOM05D000615 ORTHO05D000447 2.7e-09 67.0 325 23.1
Gorai.003G107900 Gossypium raimondii HOM05D000615 ORTHO05D000447 3.5e-09 66.6 324 24.4
arahy.Tifrunner.gnm1.ann1.68YCJI Arachis hypogaea HOM05D000615 ORTHO05D000447 6.0e-09 65.9 330 22.7
Duzib205G1441 Durio zibethinus HOM05D000615 ORTHO05D000447 6.0e-09 65.9 336 22.9
MSTRG.550 Avicennia marina HOM05D000615 ORTHO05D000447 7.8e-09 65.5 319 25.1
QL10p005950 Quercus lobata HOM05D000615 ORTHO05D000447 7.8e-09 65.5 327 24.5
arahy.Tifrunner.gnm1.ann1.QC9QN3 Arachis hypogaea HOM05D000615 ORTHO05D000447 1.3e-08 64.7 330 22.4
VMungo1383G3717 Vigna mungo HOM05D000615 ORTHO05D000447 1.7e-08 64.3 324 23.1
CANSAT01G2498 Cannabis sativa HOM05D000615 ORTHO05D000447 2.3e-08 63.9 329 24.9
Cfa004423 Carpinus fangiana HOM05D000615 ORTHO05D000447 2.3e-08 63.9 328 22.6
MD14G1167600 Malus domestica HOM05D000615 ORTHO05D000447 2.3e-08 63.9 323 24.5
Manes.15G153300 Manihot esculenta HOM05D000615 ORTHO05D000447 3.0e-08 63.5 329 22.2
Sabra16G0220400 Salix brachista HOM05D000615 ORTHO05D000447 3.0e-08 63.5 325 23.1
Ah.15g095500 Amaranthus hybridus HOM05D000615 ORTHO05D000447 5.0e-08 62.8 325 23.1
Gohir.A03G063900 Gossypium hirsutum HOM05D000615 ORTHO05D000447 6.6e-08 62.4 330 23.3
Migut.E00219 Erythranthe guttata HOM05D000615 ORTHO05D000447 8.6e-08 62.0 352 23.6
Gohir.D03G168200 Gossypium hirsutum HOM05D000615 ORTHO05D000447 8.6e-08 62.0 331 22.4
Glyma.16G067700 Glycine max HOM05D000615 ORTHO05D000447 1.1e-07 61.6 324 22.2
Manes.17G109500 Manihot esculenta HOM05D000615 ORTHO05D000447 1.1e-07 61.6 328 24.7
TWI12G0679 Tripterygium wilfordii HOM05D000615 ORTHO05D000447 1.1e-07 61.6 322 23.3
Manes.17G109600 Manihot esculenta HOM05D000615 ORTHO05D000447 1.5e-07 61.2 333 22.2
Oeu063272.1 Olea europaea HOM05D000615 ORTHO05D000447 2.5e-07 60.5 320 22.8
TPR.G28897 Trifolium pratense HOM05D000615 ORTHO05D000447 4.3e-07 59.7 305 24.3
QL06p015469 Quercus lobata HOM05D000615 ORTHO05D000447 5.6e-07 59.3 309 24.9
Cfa007321 Carpinus fangiana HOM05D000615 ORTHO05D000447 7.3e-07 58.9 325 24.0
MD16G1104800 Malus domestica HOM05D000615 ORTHO05D000447 7.3e-07 58.9 330 24.5
arahy.Tifrunner.gnm1.ann1.SDRF0F Arachis hypogaea HOM05D000615 ORTHO05D000447 9.5e-07 58.5 294 24.5
Lj5g0018723 Lotus japonicus HOM05D000615 ORTHO05D000447 9.5e-07 58.5 337 22.6
Nn3g16646 Nelumbo nucifera HOM05D000615 ORTHO05D000447 9.5e-07 58.5 280 24.3
Oeu046959.1 Olea europaea HOM05D000615 ORTHO05D000447 9.5e-07 58.5 319 24.1
CANSAT01G3271 Cannabis sativa HOM05D000615 ORTHO05D000447 1.2e-06 58.2 324 24.4
Oeu046967.1 Olea europaea HOM05D000615 ORTHO05D000447 1.2e-06 58.2 319 24.5
Cfa004435 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.6e-06 57.8 324 23.8
Cfa013104 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.6e-06 57.8 302 23.5
CiPaw.12G033300 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.6e-06 57.8 349 22.3
Ca_09831_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 2.1e-06 57.4 293 25.6
QL02p073720 Quercus lobata HOM05D000615 ORTHO05D000447 2.1e-06 57.4 325 20.6
arahy.Tifrunner.gnm1.ann1.BQ86VK Arachis hypogaea HOM05D000615 ORTHO05D000447 3.6e-06 56.6 294 24.1
Psat6g133920 Pisum sativum HOM05D000615 ORTHO05D000447 3.6e-06 56.6 309 22.3
CiPaw.11G014900 Carya illinoinensis HOM05D000615 ORTHO05D000447 4.7e-06 56.2 334 24.0
Gohir.A03G005250 Gossypium hirsutum HOM05D000615 ORTHO05D000447 4.7e-06 56.2 314 20.1
Psat6g128320 Pisum sativum HOM05D000615 ORTHO05D000447 4.7e-06 56.2 310 22.9
QL06p015361 Quercus lobata HOM05D000615 ORTHO05D000447 4.7e-06 56.2 316 23.7
EL10Ac4g09147 Beta vulgaris HOM05D000615 ORTHO05D000447 6.2e-06 55.8 306 24.5


User provided reference genes

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