Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27055 Striga asiatica HOM05D000615 ORTHO05D000447 1.0e-226 789.6 382 100.0
MSTRG.13338 Avicennia marina HOM05D000615 ORTHO05D000447 2.3e-32 144.1 259 37.8
Migut.E00218 Erythranthe guttata HOM05D000615 ORTHO05D000447 2.8e-30 137.1 255 38.4
SalBow8G0637 Salvia bowleyana HOM05D000615 ORTHO05D000447 2.4e-29 134.0 261 33.7
GSVIVG01000576001 Vitis vinifera HOM05D000615 ORTHO05D000447 2.7e-25 120.6 261 34.9
TAR622G0284 Trochodendron aralioides HOM05D000615 ORTHO05D000447 1.3e-24 118.2 265 32.5
Gohir.A03G135700 Gossypium hirsutum HOM05D000615 ORTHO05D000447 3.0e-24 117.1 258 31.0
Gorai.005G175300 Gossypium raimondii HOM05D000615 ORTHO05D000447 3.3e-23 113.6 259 31.3
Sc14g0008810 Simmondsia chinensis HOM05D000615 ORTHO05D000447 3.3e-23 113.6 220 34.1
PGSC0003DMG400016972 Solanum tuberosum HOM05D000615 ORTHO05D000447 4.3e-23 113.2 272 30.9
Manes.12G020200 Manihot esculenta HOM05D000615 ORTHO05D000447 7.4e-23 112.5 260 33.1
QL03p056367 Quercus lobata HOM05D000615 ORTHO05D000447 1.6e-22 111.3 258 32.9
Peaxi162Scf00128g00056 Petunia axillaris HOM05D000615 ORTHO05D000447 2.1e-22 110.9 270 29.6
TWI18G0878 Tripterygium wilfordii HOM05D000615 ORTHO05D000447 2.8e-22 110.5 257 31.9
Gohir.D02G156500 Gossypium hirsutum HOM05D000615 ORTHO05D000447 3.7e-22 110.2 257 30.0
CiPaw.05G178900 Carya illinoinensis HOM05D000615 ORTHO05D000447 6.3e-22 109.4 257 32.7
CAN.G43.22 Capsicum annuum HOM05D000615 ORTHO05D000447 1.1e-21 108.6 267 30.0
Duzib268G0349 Durio zibethinus HOM05D000615 ORTHO05D000447 1.8e-21 107.8 258 31.4
Thecc.02G265800 Theobroma cacao HOM05D000615 ORTHO05D000447 3.1e-21 107.1 199 35.7
Actinidia15116 Actinidia chinensis HOM05D000615 ORTHO05D000447 6.9e-21 105.9 259 30.9
Sopen05g008790 Solanum pennellii HOM05D000615 ORTHO05D000447 6.9e-21 105.9 273 28.9
CSS0030838 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 9.0e-21 105.5 259 33.6
Dinv14747 Davidia involucrata HOM05D000615 ORTHO05D000447 1.5e-20 104.8 248 32.3
Solyc05g013860.4 Solanum lycopersicum HOM05D000615 ORTHO05D000447 2.6e-20 104.0 271 29.2
MBI10_g30158_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 3.4e-20 103.6 199 33.2
CSS0050194 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 4.5e-20 103.2 263 32.7
Cfa009249 Carpinus fangiana HOM05D000615 ORTHO05D000447 7.6e-20 102.4 260 31.5
Sabra10G0019400 Salix brachista HOM05D000615 ORTHO05D000447 1.3e-19 101.7 259 30.1
CSS0013718 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 1.7e-19 101.3 204 35.3
CSS0035695 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 1.7e-19 101.3 200 35.5
Potri.010G050200 Populus trichocarpa HOM05D000615 ORTHO05D000447 2.2e-19 100.9 204 34.3
Nitab4.5_0003917g0020 Nicotiana tabacum HOM05D000615 ORTHO05D000447 2.9e-19 100.5 260 29.6
Haze_12283 Corylus avellana HOM05D000615 ORTHO05D000447 3.8e-19 100.1 260 30.8
Nitab4.5_0000229g0030 Nicotiana tabacum HOM05D000615 ORTHO05D000447 6.5e-19 99.4 259 30.5
vmacro16166 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 8.4e-19 99.0 202 34.7
Aqoxy5G03665_Aqoxy5G03666 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 1.4e-18 98.2 207 30.9
FvH4_7g07630 Fragaria vesca HOM05D000615 ORTHO05D000447 2.5e-18 97.4 204 31.9
FAN06G4356 Fragaria x ananassa HOM05D000615 ORTHO05D000447 4.2e-18 96.7 201 31.8
Cpa.g.sc33.71 Carica papaya HOM05D000615 ORTHO05D000447 5.5e-18 96.3 257 29.2
Cc11_g16070 Coffea canephora HOM05D000615 ORTHO05D000447 5.5e-18 96.3 261 28.4
Oeu040907.1 Olea europaea HOM05D000615 ORTHO05D000447 7.2e-18 95.9 157 36.3
RcHm_v2.0_Chr4g0432621 Rosa chinensis HOM05D000615 ORTHO05D000447 9.3e-18 95.5 202 31.2
PGR102G3023 Punica granatum HOM05D000615 ORTHO05D000447 1.2e-17 95.1 205 30.2
Lj3A1062T96 Lonicera japonica HOM05D000615 ORTHO05D000447 2.1e-17 94.4 202 30.2
AUR62005518 Chenopodium quinoa HOM05D000615 ORTHO05D000447 2.7e-17 94.0 203 32.5
FAN10G3496 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.7e-17 94.0 202 31.7
FAN07G1396 Fragaria x ananassa HOM05D000615 ORTHO05D000447 3.5e-17 93.6 202 30.2
Eucgr.B03242 Eucalyptus grandis HOM05D000615 ORTHO05D000447 4.6e-17 93.2 258 28.3
AUR62024224 Chenopodium quinoa HOM05D000615 ORTHO05D000447 6.1e-17 92.8 202 31.7
Atru.chr11.2178 Acer truncatum HOM05D000615 ORTHO05D000447 7.9e-17 92.4 261 26.8
CANSAT01G1199 Cannabis sativa HOM05D000615 ORTHO05D000447 7.9e-17 92.4 204 30.4
FvH4_4g25330 Fragaria vesca HOM05D000615 ORTHO05D000447 7.9e-17 92.4 202 29.7
FAN12G1729 Fragaria x ananassa HOM05D000615 ORTHO05D000447 7.9e-17 92.4 202 29.7
MD16G1104700 Malus domestica HOM05D000615 ORTHO05D000447 3.9e-16 90.1 260 31.9
Hund06046 Selenicereus undatus HOM05D000615 ORTHO05D000447 6.7e-16 89.4 203 33.5
HanXRQChr17g0540141 Helianthus annuus HOM05D000615 ORTHO05D000447 8.7e-16 89.0 214 28.5
FAN22G0970 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.9e-15 87.8 194 30.9
Lalb_Chr08g0230851 Lupinus albus HOM05D000615 ORTHO05D000447 1.9e-15 87.8 261 28.4
Prupe.1G241600 Prunus persica HOM05D000615 ORTHO05D000447 3.3e-15 87.0 269 30.1
Carub.0002s1424 Capsella rubella HOM05D000615 ORTHO05D000447 1.6e-14 84.7 194 28.4
Ciclev10030798m.g Citrus clementina HOM05D000615 ORTHO05D000447 3.7e-14 83.6 260 26.9
COL.COLO4_23504 Corchorus olitorius HOM05D000615 ORTHO05D000447 1.1e-13 82.0 263 30.0
ECA246G5141 Erigeron canadensis HOM05D000615 ORTHO05D000447 1.4e-13 81.6 196 28.1
Phvul.001G256100 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 1.8e-13 81.3 202 30.7
unitig_21.g20400 Utricularia gibba HOM05D000615 ORTHO05D000447 2.0e-12 77.8 232 27.6
AT1G67790 Arabidopsis thaliana HOM05D000615 ORTHO05D000447 3.4e-12 77.0 194 30.9
Nn3g16647 Nelumbo nucifera HOM05D000615 ORTHO05D000447 3.4e-12 77.0 198 30.3
BraA07t31065Z Brassica rapa HOM05D000615 ORTHO05D000447 1.0e-11 75.5 191 29.8
PSO063G5069 Papaver somniferum HOM05D000615 ORTHO05D000447 1.0e-11 75.5 219 27.9
Glyma.11G244200 Glycine max HOM05D000615 ORTHO05D000447 1.3e-11 75.1 202 29.2
AL2G26530 Arabidopsis lyrata HOM05D000615 ORTHO05D000447 2.2e-11 74.3 205 30.7
MBI10_g26750_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 2.9e-11 73.9 205 26.8
PSO067G0059 Papaver somniferum HOM05D000615 ORTHO05D000447 2.9e-11 73.9 219 27.4
Rhsim08G0180500 Rhododendron simsii HOM05D000615 ORTHO05D000447 2.9e-11 73.9 200 28.5
FAN17G0971 Fragaria x ananassa HOM05D000615 ORTHO05D000447 3.8e-11 73.6 186 29.0
VMungo1383G3496 Vigna mungo HOM05D000615 ORTHO05D000447 3.8e-11 73.6 202 29.2
Thhalv10019754m.g Eutrema salsugineum HOM05D000615 ORTHO05D000447 5.0e-11 73.2 186 31.7
Sp5g22800 Schrenkiella parvula HOM05D000615 ORTHO05D000447 5.0e-11 73.2 199 29.1
ECA234G0223 Erigeron canadensis HOM05D000615 ORTHO05D000447 6.5e-11 72.8 201 29.9
MD13G1105000 Malus domestica HOM05D000615 ORTHO05D000447 1.1e-10 72.0 230 26.1
Lsat_1_v5_gn_3_30081 Lactuca sativa HOM05D000615 ORTHO05D000447 1.4e-10 71.6 209 26.3
Thecc.02G265900 Theobroma cacao HOM05D000615 ORTHO05D000447 1.4e-10 71.6 208 27.9
FvH4_4g25320 Fragaria vesca HOM05D000615 ORTHO05D000447 1.9e-10 71.2 226 26.5
FAN22G2171 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.5e-10 70.9 230 24.8
MBI06_g02333_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 2.5e-10 70.9 207 27.1
Prupe.1G241500 Prunus persica HOM05D000615 ORTHO05D000447 2.5e-10 70.9 225 26.7
MBI06_g17806_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 3.2e-10 70.5 209 24.9
A07p34350 Brassica napus HOM05D000615 ORTHO05D000447 4.2e-10 70.1 191 28.3
FAN17G1162 Fragaria x ananassa HOM05D000615 ORTHO05D000447 4.2e-10 70.1 230 24.8
Ah.03g133490 Amaranthus hybridus HOM05D000615 ORTHO05D000447 7.2e-10 69.3 226 27.9
TPR.G6293 Trifolium pratense HOM05D000615 ORTHO05D000447 7.2e-10 69.3 208 26.9
FAN12G3881 Fragaria x ananassa HOM05D000615 ORTHO05D000447 9.4e-10 68.9 221 26.7
Lj4g0012004 Lotus japonicus HOM05D001244 ORTHO05D000447 9.4e-10 68.9 209 27.8
CANSAT01G2498 Cannabis sativa HOM05D000615 ORTHO05D000447 1.6e-09 68.2 211 26.1
Manes.15G153300 Manihot esculenta HOM05D000615 ORTHO05D000447 1.6e-09 68.2 209 24.4
BcaC08g46206 Brassica carinata HOM05D000615 ORTHO05D000447 2.7e-09 67.4 197 27.9
C06p42180 Brassica napus HOM05D000615 ORTHO05D000447 2.7e-09 67.4 197 27.9
BolC6t39206H Brassica oleracea HOM05D000615 ORTHO05D000447 2.7e-09 67.4 192 28.1
PGSC0003DMG400015156 Solanum tuberosum HOM05D000615 ORTHO05D000447 2.7e-09 67.4 206 26.2
HanXRQChr12g0385781 Helianthus annuus HOM05D000615 ORTHO05D000447 3.6e-09 67.0 202 29.7
VMungo0251G3150 Vigna mungo HOM05D000615 ORTHO05D000447 3.6e-09 67.0 206 28.2
Actinidia11915 Actinidia chinensis HOM05D000615 ORTHO05D000447 4.6e-09 66.6 212 26.4
FAN07G0480 Fragaria x ananassa HOM05D000615 ORTHO05D000447 4.6e-09 66.6 230 24.3
MD14G1167600 Malus domestica HOM05D000615 ORTHO05D000447 4.6e-09 66.6 214 26.2
Medtr8g089660 Medicago truncatula HOM05D000615 ORTHO05D000447 4.6e-09 66.6 203 26.6
arahy.Tifrunner.gnm1.ann1.90SEXW Arachis hypogaea HOM05D000615 ORTHO05D000447 6.1e-09 66.2 205 25.4
arahy.Tifrunner.gnm1.ann1.YGY15Y Arachis hypogaea HOM05D000615 ORTHO05D000447 7.9e-09 65.9 210 26.2
HPP92_024525 Vanilla planifolia HOM05D000615 ORTHO05D000447 7.9e-09 65.9 208 26.4
BcaB03g15157 Brassica carinata HOM05D000615 ORTHO05D000447 1.0e-08 65.5 189 28.0
HanXRQChr17g0569431 Helianthus annuus HOM05D000615 ORTHO05D000447 1.0e-08 65.5 201 27.4
Hma1.2p1_0079F.1_g041185 Hydrangea macrophylla HOM05D000615 ORTHO05D000447 1.0e-08 65.5 206 25.2
Lsat_1_v5_gn_4_3881 Lactuca sativa HOM05D000615 ORTHO05D000447 1.0e-08 65.5 202 28.7
Lj6C815T6 Lonicera japonica HOM05D000615 ORTHO05D000447 1.8e-08 64.7 213 25.8
Sopen03g030910 Solanum pennellii HOM05D000615 ORTHO05D000447 1.8e-08 64.7 206 25.7
RcHm_v2.0_Chr4g0432611 Rosa chinensis HOM05D000615 ORTHO05D000447 2.3e-08 64.3 230 24.3
Solyc03g111810.2 Solanum lycopersicum HOM05D000615 ORTHO05D000447 2.3e-08 64.3 206 25.2
Manes.17G109700 Manihot esculenta HOM05D000615 ORTHO05D000447 3.0e-08 63.9 201 24.9
Manes.17G109600 Manihot esculenta HOM05D000615 ORTHO05D000447 5.1e-08 63.2 202 24.8
Prupe.5G162100 Prunus persica HOM05D000615 ORTHO05D000447 5.1e-08 63.2 211 25.1
TAR374G0229 Trochodendron aralioides HOM05D000615 ORTHO05D000447 5.1e-08 63.2 212 23.6
MD13G1105100 Malus domestica HOM05D000615 ORTHO05D000447 6.7e-08 62.8 219 25.6
AUR62022088 Chenopodium quinoa HOM05D000615 ORTHO05D000447 8.8e-08 62.4 207 26.1
CiPaw.11G014800 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.1e-07 62.0 217 25.3
GSVIVG01000577001 Vitis vinifera HOM05D000615 ORTHO05D000447 1.5e-07 61.6 211 26.1
ATR0199G005 Amborella trichopoda HOM05D000615 ORTHO05D000447 2.0e-07 61.2 205 24.4
EL10Ac7g18028 Beta vulgaris HOM05D000615 ORTHO05D000447 2.0e-07 61.2 207 26.6
THA.LOC104821100 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 2.0e-07 61.2 214 23.8
Ah.08g218430 Amaranthus hybridus HOM05D000615 ORTHO05D000447 2.5e-07 60.8 211 23.7
ClCG06G017530 Citrullus lanatus HOM05D000615 ORTHO05D000447 3.3e-07 60.5 211 25.6
Glyma.18G012800 Glycine max HOM05D000615 ORTHO05D000447 3.3e-07 60.5 122 32.8
CiPaw.11G014900 Carya illinoinensis HOM05D000615 ORTHO05D000447 4.3e-07 60.1 215 25.1
C09p75000 Brassica napus HOM05D000615 ORTHO05D000447 5.7e-07 59.7 219 22.8
CANSAT01G0408 Cannabis sativa HOM05D000615 ORTHO05D000447 5.7e-07 59.7 130 30.0
CANSAT80G1326 Cannabis sativa HOM05D000615 ORTHO05D000447 5.7e-07 59.7 210 25.7
CsaV3_1G000920 Cucumis sativus L. HOM05D000615 ORTHO05D000447 7.4e-07 59.3 211 25.6
MELO3C010700.2 Cucumis melo HOM05D000615 ORTHO05D000447 9.7e-07 58.9 203 24.1
Migut.E00219 Erythranthe guttata HOM05D000615 ORTHO05D000447 9.7e-07 58.9 207 22.2
MELO3C026244.2 Cucumis melo HOM05D000615 ORTHO05D000447 1.3e-06 58.5 211 25.6
FvH4_4g25310 Fragaria vesca HOM05D000615 ORTHO05D000447 1.3e-06 58.5 223 24.2
Cfa009252 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.7e-06 58.2 190 26.3
Sed0014959 Sechium edule HOM05D000615 ORTHO05D000447 1.7e-06 58.2 211 23.2
MD14G1167500 Malus domestica HOM05D000615 ORTHO05D000447 2.2e-06 57.8 204 25.5
FAN22G0435 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.8e-06 57.4 223 25.1
Lsat_1_v5_gn_5_12800 Lactuca sativa HOM05D000615 ORTHO05D000447 4.8e-06 56.6 211 23.7
ECA246G1348 Erigeron canadensis HOM05D000615 ORTHO05D000447 8.2e-06 55.8 206 24.3
HanXRQChr05g0156171 Helianthus annuus HOM05D000615 ORTHO05D000447 8.2e-06 55.8 209 25.4


User provided reference genes

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