Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.2e-112 409.8 210 100.0
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.9e-76 289.7 216 71.8
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 2.9e-69 265.8 216 68.5
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.1e-68 263.8 221 66.1
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 5.1e-66 255.0 217 65.0
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 6.6e-58 228.0 217 62.7
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 5.8e-54 214.9 213 55.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 9.9e-54 214.2 213 55.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 9.9e-54 214.2 213 55.9
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 3.8e-53 212.2 226 57.5
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.9e-52 209.9 227 52.9
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.2e-52 208.8 211 54.5
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 2.8e-48 196.1 210 56.7
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 2.8e-48 196.1 215 53.0
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 9.0e-47 191.0 213 53.5
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 4.5e-46 188.7 190 56.8
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 3.8e-45 185.7 224 50.0
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 8.4e-45 184.5 216 51.9
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.4e-44 183.7 216 50.9
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 2.4e-44 183.0 214 50.0
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 4.2e-44 182.2 213 48.4
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 7.9e-43 177.9 218 50.0
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.0e-42 177.6 214 48.6
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 1.3e-42 177.2 220 48.6
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.8e-42 176.8 215 48.4
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.8e-42 176.8 222 49.1
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 1.8e-42 176.8 210 48.6
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 3.0e-42 176.0 219 47.9
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.1e-41 174.1 221 48.9
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.1e-41 174.1 223 48.0
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.5e-41 172.9 213 50.7
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 4.3e-41 172.2 216 49.5
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 4.3e-41 172.2 222 48.6
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 2.8e-40 169.5 211 49.3
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.8e-40 168.7 213 49.3
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.8e-40 168.7 222 49.5
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 4.8e-40 168.7 211 46.4
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 6.2e-40 168.3 222 49.1
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 8.1e-40 167.9 222 48.6
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.4e-39 167.2 215 47.0
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.8e-39 166.8 213 49.8
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 6.9e-39 164.9 210 49.5
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 9.0e-39 164.5 215 47.0
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 9.0e-39 164.5 212 47.6
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.5e-38 163.7 223 45.7
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 3.4e-38 162.5 216 47.2
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 5.8e-38 161.8 213 47.4
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 7.6e-38 161.4 211 46.9
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.7e-37 160.2 216 46.3
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 2.2e-37 159.8 211 46.4
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 6.5e-37 158.3 269 41.3
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 8.4e-37 157.9 211 46.4
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.1e-36 157.5 219 45.7
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.9e-36 156.8 215 43.7
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.5e-36 156.4 212 47.2
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 3.2e-36 156.0 219 44.7
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 9.3e-36 154.5 219 48.4
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.2e-35 154.1 209 47.4
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.2e-35 154.1 211 45.0
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 1.6e-35 153.7 219 42.5
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.1e-35 153.3 209 46.4
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 6.0e-35 151.8 219 42.5
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 6.0e-35 151.8 219 42.5
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 6.0e-35 151.8 245 42.9
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 1.0e-34 151.0 209 46.9
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.3e-34 150.6 212 44.3
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 3.0e-34 149.4 221 41.2
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.1e-33 147.5 224 43.8
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 2.5e-33 146.4 219 40.6
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 5.7e-33 145.2 217 39.2
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 5.7e-33 145.2 216 39.8
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 5.7e-33 145.2 222 41.0
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 5.7e-33 145.2 222 41.4
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 7.4e-33 144.8 216 44.0
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 2.8e-32 142.9 211 42.2
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.4e-31 140.6 164 48.8
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 3.1e-31 139.4 211 41.7
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.5e-30 137.1 217 40.6
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.0e-30 136.7 222 43.7
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.0e-30 136.7 166 44.6
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 4.5e-30 135.6 227 39.2
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 4.5e-30 135.6 206 43.2
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 4.5e-30 135.6 221 41.6
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 5.8e-30 135.2 216 39.4
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 7.6e-30 134.8 160 46.2
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 7.6e-30 134.8 212 40.1
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 7.6e-30 134.8 220 39.1
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.3e-29 134.0 222 38.7
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.7e-29 133.7 217 37.8
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.5e-28 129.8 217 38.2
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 5.5e-28 128.6 162 48.1
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 1.3e-26 124.0 162 42.6
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 2.2e-24 116.7 111 56.8
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 6.3e-24 115.2 131 46.6
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 4.1e-23 112.5 121 52.9
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.0e-21 107.8 124 50.0
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 1.3e-21 107.5 156 43.6
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.5e-21 105.1 129 46.5
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 4.2e-20 102.4 213 34.7
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 5.0e-13 79.0 135 37.0
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 3.2e-12 76.3 140 41.4
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.6e-11 73.9 88 47.7
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 2.8e-08 63.2 92 42.4


User provided reference genes

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