Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 6.3e-153 544.3 319 100.0
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.2e-98 364.0 320 63.1
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.8e-94 350.1 318 61.0
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 3.0e-94 349.4 321 61.7
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 6.7e-94 348.2 290 67.2
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 6.5e-89 331.6 290 64.8
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 8.4e-89 331.3 317 58.7
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 3.2e-88 329.3 330 57.0
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 5.5e-88 328.6 268 67.2
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 3.5e-87 325.9 267 65.2
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 3.5e-87 325.9 262 65.6
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.0e-86 324.3 323 57.3
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 2.5e-85 319.7 321 55.5
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 1.3e-84 317.4 311 55.3
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 4.8e-84 315.5 321 55.5
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 1.4e-83 313.9 325 56.3
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 1.8e-83 313.5 292 59.6
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 3.1e-83 312.8 316 55.7
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 5.3e-83 312.0 311 53.7
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 5.3e-83 312.0 318 56.3
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 2.0e-82 310.1 249 71.1
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 4.5e-82 308.9 314 62.4
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 5.9e-82 308.5 315 61.0
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 1.0e-81 307.8 329 59.0
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 1.3e-81 307.4 324 54.9
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 1.3e-81 307.4 327 55.7
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 2.2e-81 306.6 318 54.7
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 2.9e-81 306.2 257 62.3
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 3.8e-81 305.8 335 54.9
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 5.0e-81 305.4 316 55.1
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 5.0e-81 305.4 335 52.2
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 6.5e-81 305.1 324 53.7
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 6.5e-81 305.1 306 55.2
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 8.5e-81 304.7 259 61.4
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 1.9e-80 303.5 318 53.1
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 2.5e-80 303.1 315 54.9
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 2.5e-80 303.1 307 54.1
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 3.2e-80 302.8 310 54.5
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 9.4e-80 301.2 313 53.0
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 2.1e-79 300.1 308 54.5
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 2.7e-79 299.7 323 55.4
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 4.6e-79 298.9 279 59.1
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 7.9e-79 298.1 278 59.0
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 1.4e-78 297.4 319 52.0
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 1.4e-78 297.4 303 54.8
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 1.4e-78 297.4 351 49.3
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 1.8e-78 297.0 333 52.0
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 8.8e-78 294.7 320 53.1
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 1.1e-77 294.3 329 53.2
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 1.5e-77 293.9 332 50.0
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 2.5e-77 293.1 296 53.7
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 3.3e-77 292.7 322 53.1
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 4.3e-77 292.4 309 56.3
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 4.3e-77 292.4 245 60.4
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 4.3e-77 292.4 260 58.8
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 7.4e-77 291.6 249 65.5
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 9.7e-77 291.2 310 55.2
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 9.7e-77 291.2 310 54.8
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 1.3e-76 290.8 317 53.0
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 1.3e-76 290.8 302 55.6
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 2.8e-76 289.7 287 55.1
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 4.8e-76 288.9 307 52.4
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 4.8e-76 288.9 274 56.6
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 8.2e-76 288.1 285 55.4
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 1.4e-75 287.3 261 59.0
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 4.1e-75 285.8 325 49.8
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 5.3e-75 285.4 330 49.4
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 6.9e-75 285.0 258 58.5
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 6.9e-75 285.0 314 51.9
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 6.9e-75 285.0 303 52.8
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 9.1e-75 284.6 245 60.8
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 9.1e-75 284.6 253 60.5
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 2.0e-74 283.5 322 52.5
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 2.0e-74 283.5 318 54.4
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.6e-74 283.1 259 57.1
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 4.5e-74 282.3 320 51.2
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 1.7e-73 280.4 319 52.0
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 1.7e-73 280.4 245 60.4
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 2.2e-73 280.0 256 59.0
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 1.1e-72 277.7 245 60.8
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 1.1e-72 277.7 315 52.1
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 1.4e-72 277.3 241 60.6
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 1.9e-72 276.9 235 62.1
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 2.5e-72 276.6 311 53.1
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 4.2e-72 275.8 245 60.4
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 1.6e-71 273.9 278 55.4
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 3.6e-71 272.7 322 50.3
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 4.7e-71 272.3 316 50.6
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 6.1e-71 271.9 261 56.7
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 7.9e-71 271.6 320 50.0
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 7.9e-71 271.6 325 49.8
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.8e-70 270.4 259 57.9
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 5.1e-70 268.9 319 49.2
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 5.1e-70 268.9 202 68.3
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 6.7e-70 268.5 209 65.1
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 2.0e-69 266.9 253 57.3
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 5.7e-69 265.4 197 66.5
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 7.4e-69 265.0 263 58.6
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 4.5e-66 255.8 209 64.6
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 1.7e-65 253.8 198 63.6
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 3.2e-64 249.6 206 63.1
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 3.2e-64 249.6 202 61.9
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 3.2e-64 249.6 199 72.9
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 2.7e-63 246.5 301 47.8
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 2.1e-55 220.3 208 54.3
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 3.1e-51 206.5 232 52.2
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 9.1e-51 204.9 197 54.3
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 4.5e-50 202.6 203 51.7
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 5.9e-50 202.2 232 45.7
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 1.6e-47 194.1 234 47.0
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 2.0e-42 177.2 198 47.5
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 6.4e-36 155.6 194 49.5
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 2.4e-35 153.7 149 50.3
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 2.3e-22 110.5 176 48.3
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 7.1e-19 99.0 177 34.5
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 2.7e-18 97.1 77 66.2
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 3.5e-18 96.7 77 64.9
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.9e-17 93.2 68 63.2
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 2.3e-09 67.4 67 55.2


User provided reference genes

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