Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G26964 Striga asiatica HOM05D003222 ORTHO05D003706 1.4e-113 412.9 204 100.0
SGA_v2.0_scaffold48G17947 Striga asiatica HOM05D003222 ORTHO05D003706 9.4e-17 91.3 105 50.5
SalBow7G3303 Salvia bowleyana HOM05D003222 ORTHO05D003706 3.5e-11 72.8 102 44.1
Nn5g28626 Nelumbo nucifera HOM05D003222 ORTHO05D003706 7.7e-11 71.6 102 40.2
MSTRG.25331 Avicennia marina HOM05D003222 ORTHO05D003706 6.5e-10 68.6 102 43.1
CANSAT25G3175 Cannabis sativa HOM05D003222 ORTHO05D003706 6.5e-10 68.6 102 42.2
Oeu007011.1 Olea europaea HOM05D003222 ORTHO05D003706 1.9e-09 67.0 102 41.2
CDE02G3342 Ceratophyllum demersum HOM05D003222 ORTHO05D003706 2.5e-09 66.6 104 39.4
ClCG08G006460 Citrullus lanatus HOM05D003222 ORTHO05D003706 7.2e-09 65.1 95 41.1
PSO675G4739 Papaver somniferum HOM05D000091 ORTHO05D003024 7.2e-09 65.1 95 41.1
Sc11g0004110 Simmondsia chinensis HOM05D003222 ORTHO05D003706 7.2e-09 65.1 102 41.2
AUR62013496 Chenopodium quinoa HOM05D003222 ORTHO05D003706 9.4e-09 64.7 95 42.1
Cc10_g12860 Coffea canephora HOM05D003222 ORTHO05D003706 9.4e-09 64.7 101 40.6
CsaV3_6G030960 Cucumis sativus L. HOM05D003222 ORTHO05D003706 9.4e-09 64.7 95 41.1
PSO541G0284 Papaver somniferum HOM05D003222 ORTHO05D003706 9.4e-09 64.7 128 34.4
MELO3C008408.2 Cucumis melo HOM05D003222 ORTHO05D003706 1.6e-08 63.9 95 41.1
Migut.C01038 Erythranthe guttata HOM05D003222 ORTHO05D003706 1.6e-08 63.9 95 41.1
Aqoxy3G00819 Aquilegia oxysepala HOM05D003222 ORTHO05D003706 2.1e-08 63.5 106 35.8
Phvul.009G135000 Phaseolus vulgaris HOM05D003222 ORTHO05D003706 2.1e-08 63.5 106 36.8
GSVIVG01010034001 Vitis vinifera HOM05D003222 ORTHO05D003706 2.1e-08 63.5 102 38.2
HanXRQChr08g0232571 Helianthus annuus HOM05D003222 ORTHO05D003706 2.7e-08 63.2 105 39.0
Hma1.2p1_2059F.1_g312860 Hydrangea macrophylla HOM05D003222 ORTHO05D003706 2.7e-08 63.2 97 40.2
Peaxi162Scf00130g00920 Petunia axillaris HOM05D003222 ORTHO05D003706 2.7e-08 63.2 95 37.9
HPP92_005673 Vanilla planifolia HOM05D003222 ORTHO05D003706 2.7e-08 63.2 102 40.2
Hma1.2p1_1977F.1_g309770 Hydrangea macrophylla HOM05D003222 ORTHO05D003706 3.6e-08 62.8 101 40.6
Lalb_Chr11g0066441 Lupinus albus HOM05D003222 ORTHO05D003706 3.6e-08 62.8 95 37.9
CSS0010604 Camellia sinensis var. sinensis HOM05D003222 ORTHO05D003706 4.7e-08 62.4 101 42.6
Eucgr.F02739 Eucalyptus grandis HOM05D003222 ORTHO05D003706 4.7e-08 62.4 95 42.1
Lj1g0028017 Lotus japonicus HOM05D003222 ORTHO05D003706 4.7e-08 62.4 101 37.6
Sed0007582 Sechium edule HOM05D003222 ORTHO05D003706 4.7e-08 62.4 102 38.2
Ciclev10001907m.g Citrus clementina HOM05D003222 ORTHO05D003706 6.1e-08 62.0 105 37.1
TAR381G1145 Trochodendron aralioides HOM05D003222 ORTHO05D003706 6.1e-08 62.0 95 40.0
Actinidia10674 Actinidia chinensis HOM05D000043 ORTHO05D003706 8.0e-08 61.6 105 38.1
CSS0028568 Camellia sinensis var. sinensis HOM05D003222 ORTHO05D003706 8.0e-08 61.6 114 40.4
Glyma.04G240500 Glycine max HOM05D003222 ORTHO05D003706 8.0e-08 61.6 103 38.8
MBI06_g18872_MAGBIO Magnolia biondii HOM05D003222 ORTHO05D003706 8.0e-08 61.6 95 41.1
EL10Ac1g01476 Beta vulgaris HOM05D003222 ORTHO05D003706 1.0e-07 61.2 95 41.1
Os04g0438300 Oryza sativa ssp. japonica HOM05D003222 ORTHO05D003706 1.4e-07 60.8 95 38.9
arahy.Tifrunner.gnm1.ann1.EV65WI Arachis hypogaea HOM05D003222 ORTHO05D003706 2.3e-07 60.1 95 38.9
Psat0s2193g0160 Pisum sativum HOM05D003222 ORTHO05D003706 2.3e-07 60.1 106 34.9
Haze_17713 Corylus avellana HOM05D003222 ORTHO05D003706 3.0e-07 59.7 107 37.4
Nitab4.5_0001354g0070 Nicotiana tabacum HOM05D003222 ORTHO05D003706 3.0e-07 59.7 102 38.2
AUR62026780 Chenopodium quinoa HOM05D003222 ORTHO05D003706 4.0e-07 59.3 93 41.9
Lj4A691T75 Lonicera japonica HOM05D003222 ORTHO05D003706 4.0e-07 59.3 95 41.1
Medtr3g090140 Medicago truncatula HOM05D003222 ORTHO05D003706 4.0e-07 59.3 100 37.0
Manes.02G175400 Manihot esculenta HOM05D003222 ORTHO05D003706 5.2e-07 58.9 119 36.1
Thecc.08G145000 Theobroma cacao HOM05D003222 ORTHO05D003706 5.2e-07 58.9 105 36.2
arahy.Tifrunner.gnm1.ann1.5V4LVB Arachis hypogaea HOM05D003222 ORTHO05D003706 6.8e-07 58.5 92 39.1
TWI60G0779 Tripterygium wilfordii HOM05D003222 ORTHO05D003706 6.8e-07 58.5 95 37.9
Ca_16653_v3 Cicer arietinum L. HOM05D003222 ORTHO05D003706 8.8e-07 58.2 100 36.0
QL02p025275 Quercus lobata HOM05D003222 ORTHO05D003706 8.8e-07 58.2 101 39.6
ECA246G4739 Erigeron canadensis HOM05D003222 ORTHO05D003706 1.5e-06 57.4 171 26.3
Nitab4.5_0000165g0020 Nicotiana tabacum HOM05D003222 ORTHO05D003706 1.5e-06 57.4 95 36.8
unitig_747.g21499 Utricularia gibba HOM05D003222 ORTHO05D003706 1.5e-06 57.4 90 40.0
TWI79G0802 Tripterygium wilfordii HOM05D003222 ORTHO05D003706 2.6e-06 56.6 106 31.1
CARHR070600 Cardamine hirsuta HOM05D003222 ORTHO05D003706 4.4e-06 55.8 95 37.9
CARHR062090 Cardamine hirsuta HOM05D003222 ORTHO05D003706 5.7e-06 55.5 106 30.2
VMungo1309G1965 Vigna mungo HOM05D000058 ORTHO05D000077 5.7e-06 55.5 103 35.0
Ah.05g167550 Amaranthus hybridus HOM05D003222 ORTHO05D003706 7.5e-06 55.1 119 34.5
ECA246G5345 Erigeron canadensis HOM05D003222 ORTHO05D003706 7.5e-06 55.1 89 40.4
SGA_v2.0_scaffold16G07804 Striga asiatica HOM05D003222 ORTHO05D003706 7.5e-06 55.1 123 30.9
THA.LOC104822006 Tarenaya hassleriana HOM05D003222 ORTHO05D003706 9.8e-06 54.7 106 32.1
TPR.G23766 Trifolium pratense HOM05D003222 ORTHO05D003706 9.8e-06 54.7 123 29.3


User provided reference genes

Program Settings