Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 9.5e-167 590.1 300 100.0
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 4.0e-125 451.8 309 73.1
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.5e-119 433.3 309 70.6
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 2.8e-118 429.1 307 67.8
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.8e-117 426.4 307 68.7
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.5e-116 423.3 309 66.7
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 3.4e-116 422.2 308 67.9
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 4.9e-115 418.3 308 67.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 8.4e-115 417.5 309 68.0
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 4.8e-110 401.7 307 64.2
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 1.1e-109 400.6 307 64.2
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.8e-109 399.8 308 64.3
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 3.4e-108 395.6 307 62.9
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 5.9e-108 394.8 309 63.1
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 2.5e-106 389.4 308 61.7
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 3.2e-106 389.0 305 63.9
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 3.9e-104 382.1 308 63.0
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 6.7e-104 381.3 303 59.4
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 8.7e-104 380.9 307 59.9
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.5e-103 380.2 307 60.3
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 2.5e-103 379.4 307 59.6
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 5.7e-103 378.3 309 59.5
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 9.7e-103 377.5 302 61.6
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 1.8e-101 373.2 307 59.0
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 4.1e-101 372.1 318 58.2
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 6.9e-101 371.3 307 57.3
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 2.0e-100 369.8 306 60.1
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.7e-99 366.7 303 57.4
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.7e-99 366.7 304 57.6
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 2.2e-99 366.3 307 57.3
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.2e-99 366.3 307 57.3
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 2.2e-99 366.3 303 57.1
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 2.2e-99 366.3 306 60.8
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.0e-99 365.2 307 57.0
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 6.5e-99 364.8 303 57.1
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 6.5e-99 364.8 307 57.0
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.9e-98 363.2 302 58.6
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.5e-98 362.8 307 57.0
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 2.5e-98 362.8 307 56.4
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 4.2e-98 362.1 307 58.6
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 7.2e-98 361.3 307 56.0
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 2.1e-97 359.8 308 55.8
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.1e-97 359.8 308 56.2
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 2.1e-97 359.8 307 58.6
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 6.1e-97 358.2 307 57.3
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 3.9e-96 355.5 307 57.3
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 3.9e-96 355.5 307 55.7
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 6.7e-96 354.8 307 57.0
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.1e-95 354.0 309 57.3
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.5e-95 352.8 307 57.3
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 4.3e-95 352.1 307 57.0
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 5.7e-95 351.7 302 55.3
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 2.2e-94 349.7 310 56.1
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 2.2e-94 349.7 310 56.1
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 3.7e-94 349.0 308 54.9
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.8e-94 348.6 307 55.4
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 4.8e-94 348.6 307 55.0
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 6.3e-94 348.2 308 54.5
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.4e-93 347.1 307 53.4
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 9.1e-93 344.4 353 50.7
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 3.4e-92 342.4 429 45.2
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 5.9e-92 341.7 287 57.1
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 7.7e-92 341.3 347 52.2
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 6.5e-91 338.2 353 49.9
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.2e-89 334.0 304 51.6
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 3.6e-89 332.4 307 53.1
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 2.8e-86 322.8 271 58.3
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 6.3e-86 321.6 303 53.5
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 5.3e-85 318.5 302 52.6
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 9.1e-85 317.8 292 52.4
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 7.2e-82 308.1 319 53.0
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 6.7e-80 301.6 251 62.5
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 1.5e-79 300.4 237 59.5
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 1.7e-78 297.0 307 46.6
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 2.2e-78 296.6 305 47.2
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 3.7e-78 295.8 233 58.4
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.1e-77 294.3 307 46.3
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 1.1e-77 294.3 307 46.3
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.4e-77 293.9 266 57.9
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 7.0e-77 291.6 266 57.1
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.6e-76 290.4 305 49.2
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 2.7e-76 289.7 307 45.9
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 5.9e-76 288.5 297 51.5
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 2.9e-75 286.2 311 44.4
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.1e-74 284.3 307 44.0
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.1e-74 284.3 301 47.2
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 1.9e-74 283.5 307 46.3
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.6e-73 280.4 307 44.3
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.6e-73 280.4 307 45.6
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 3.6e-73 279.3 292 46.2
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 4.7e-73 278.9 301 49.5
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 1.7e-70 270.4 289 45.7
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 6.3e-70 268.5 239 56.5
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 1.4e-69 267.3 222 57.7
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 5.4e-69 265.4 292 45.5
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.6e-68 263.8 228 60.1
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 1.9e-66 256.9 241 54.8
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 7.2e-66 255.0 217 60.8
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 5.4e-61 238.8 301 42.5
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 3.6e-57 226.1 171 61.4
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 6.6e-51 205.3 241 43.6
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 1.0e-43 181.4 297 32.0
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 5.6e-42 175.6 240 40.4
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.1e-40 171.4 115 67.8
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 4.3e-34 149.4 275 28.7
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.0e-28 129.0 112 55.4
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.9e-26 124.0 68 82.4
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 6.2e-25 119.0 67 77.6
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.4e-24 117.1 67 76.1
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 1.2e-23 114.8 69 78.3
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 1.6e-20 104.4 64 67.2
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 2.0e-07 60.8 62 50.0


User provided reference genes

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