Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold86G26891 Striga asiatica HOM05D003903 ORTHO05D402899 1.7e-75 285.8 136 100.0
SGA_v2.0_scaffold60G21023 Striga asiatica HOM05D003903 ORTHO05D004828 2.6e-10 69.3 52 63.5
Prupe.2G247600 Prunus persica HOM05D003903 ORTHO05D004828 1.5e-07 60.1 39 61.5
FvH4_7g24150 Fragaria vesca HOM05D003903 ORTHO05D004828 2.0e-07 59.7 39 61.5
FAN01G2475 Fragaria x ananassa HOM05D003903 ORTHO05D004828 2.0e-07 59.7 39 61.5
FAN10G1202 Fragaria x ananassa HOM05D003903 ORTHO05D004828 2.0e-07 59.7 39 61.5
FAN03G2393 Fragaria x ananassa HOM05D003903 ORTHO05D004828 4.5e-07 58.5 39 61.5
MD01G1148800 Malus domestica HOM05D003903 ORTHO05D004828 4.5e-07 58.5 39 59.0
MD07G1215700 Malus domestica HOM05D003903 ORTHO05D004828 4.5e-07 58.5 39 59.0
RcHm_v2.0_Chr1g0369681 Rosa chinensis HOM05D003903 ORTHO05D004828 4.5e-07 58.5 39 61.5
Manes.10G016200 Manihot esculenta HOM05D003903 ORTHO05D004828 5.9e-07 58.2 39 59.0
Migut.F00698 Erythranthe guttata HOM05D003903 ORTHO05D004828 7.7e-07 57.8 39 64.1
CiPaw.01G296700 Carya illinoinensis HOM05D003903 ORTHO05D004828 1.0e-06 57.4 39 56.4
Cc02_g06790 Coffea canephora HOM05D003903 ORTHO05D004828 1.0e-06 57.4 49 51.0
Sed0011279 Sechium edule HOM05D003903 ORTHO05D004828 1.0e-06 57.4 39 64.1
Nn2g11424 Nelumbo nucifera HOM05D003903 ORTHO05D004828 1.3e-06 57.0 43 53.5
MSTRG.8967 Avicennia marina HOM05D003903 ORTHO05D004828 1.7e-06 56.6 39 64.1
COL.COLO4_25636 Corchorus olitorius HOM05D003903 ORTHO05D004828 1.7e-06 56.6 39 59.0
Lj8C71T1 Lonicera japonica HOM05D003903 ORTHO05D004828 1.7e-06 56.6 39 61.5
MSTRG.27342 Avicennia marina HOM05D003903 ORTHO05D004828 2.2e-06 56.2 39 59.0
ClCG11G006280 Citrullus lanatus HOM05D003903 ORTHO05D004828 2.9e-06 55.8 39 59.0
CsaV3_6G001690 Cucumis sativus L. HOM05D003903 ORTHO05D004828 3.8e-06 55.5 39 59.0
Duzib114G0607 Durio zibethinus HOM05D003903 ORTHO05D004828 3.8e-06 55.5 39 59.0
FAN06G4939 Fragaria x ananassa HOM05D003903 ORTHO05D004828 3.8e-06 55.5 39 59.0
Gohir.A05G303900 Gossypium hirsutum HOM05D003903 ORTHO05D004828 3.8e-06 55.5 39 59.0
Thecc.10G023200 Theobroma cacao HOM05D003903 ORTHO05D004828 3.8e-06 55.5 39 56.4
Gohir.A10G233600 Gossypium hirsutum HOM05D003903 ORTHO05D004828 6.5e-06 54.7 39 56.4
Gorai.009G322100 Gossypium raimondii HOM05D003903 ORTHO05D004828 6.5e-06 54.7 39 56.4
Gorai.011G283600 Gossypium raimondii HOM05D003903 ORTHO05D004828 6.5e-06 54.7 39 56.4
Manes.07G126900 Manihot esculenta HOM05D003903 ORTHO05D004828 6.5e-06 54.7 39 56.4
CiPaw.02G190900 Carya illinoinensis HOM05D003903 ORTHO05D004828 8.5e-06 54.3 39 56.4
TAR633G2671 Trochodendron aralioides HOM05D003903 ORTHO05D004828 8.5e-06 54.3 39 53.8


User provided reference genes

Program Settings