Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold86G26865 Striga asiatica HOM05D003956 ORTHO05D004850 3.4e-203 711.4 356 100.0
SGA_v2.0_scaffold142G35643 Striga asiatica HOM05D003956 ORTHO05D004850 4.6e-160 568.2 383 77.5
AUR62034949 Chenopodium quinoa HOM05D003956 ORTHO05D004850 2.9e-146 522.3 344 75.0
Oeu032695.1 Olea europaea HOM05D003956 ORTHO05D004850 4.9e-146 521.5 391 69.6
Migut.G00280 Erythranthe guttata HOM05D003956 ORTHO05D004850 1.4e-145 520.0 391 69.6
Migut.G00282 Erythranthe guttata HOM05D003956 ORTHO05D004850 1.4e-145 520.0 391 69.6
SalBow2G1708 Salvia bowleyana HOM05D003956 ORTHO05D004850 4.6e-144 515.0 383 68.7
MELO3C006585.2 Cucumis melo HOM05D003956 ORTHO05D004850 6.0e-144 514.6 391 68.8
Sed0002405 Sechium edule HOM05D003956 ORTHO05D004850 1.0e-143 513.8 391 68.5
Rhsim04G0213100 Rhododendron simsii HOM05D003956 ORTHO05D004850 6.6e-143 511.1 391 68.0
EL10Ac1g01820 Beta vulgaris HOM05D003956 ORTHO05D004850 8.7e-143 510.8 347 73.2
Hma1.2p1_0511F.1_g169230 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 4.3e-142 508.4 383 67.9
Prupe.1G146600 Prunus persica HOM05D003956 ORTHO05D004850 5.6e-142 508.1 391 66.8
Haze_01011 Corylus avellana HOM05D003956 ORTHO05D004850 7.3e-142 507.7 386 68.1
CsaV3_3G013930 Cucumis sativus L. HOM05D003956 ORTHO05D004850 7.3e-142 507.7 391 68.0
Atru.chr4.2704 Acer truncatum HOM05D003956 ORTHO05D004850 1.3e-141 506.9 391 67.5
Nn3g21184 Nelumbo nucifera HOM05D003956 ORTHO05D004850 1.3e-141 506.9 391 66.2
MD16G1179500 Malus domestica HOM05D003956 ORTHO05D004850 1.6e-141 506.5 386 67.6
TAR365G1004 Trochodendron aralioides HOM05D003956 ORTHO05D004850 1.6e-141 506.5 391 66.5
GSVIVG01017850001 Vitis vinifera HOM05D003956 ORTHO05D004850 1.6e-141 506.5 391 66.5
MD13G1177400 Malus domestica HOM05D003956 ORTHO05D004850 2.8e-141 505.8 386 67.4
Manes.03G188300 Manihot esculenta HOM05D003956 ORTHO05D004850 3.6e-141 505.4 391 67.3
Hund20662 Selenicereus undatus HOM05D003956 ORTHO05D004850 4.8e-141 505.0 383 67.6
Ciclev10006837m.g Citrus clementina HOM05D003956 ORTHO05D004850 8.1e-141 504.2 400 65.5
CiPaw.01G156600 Carya illinoinensis HOM05D003956 ORTHO05D004850 1.1e-140 503.8 391 66.5
QL06p006231 Quercus lobata HOM05D003956 ORTHO05D004850 1.1e-140 503.8 403 65.3
ClCG05G005590 Citrullus lanatus HOM05D003956 ORTHO05D004850 2.4e-140 502.7 391 67.5
Gorai.011G181800 Gossypium raimondii HOM05D003956 ORTHO05D004850 2.4e-140 502.7 391 66.8
vmacro08238 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 4.0e-140 501.9 409 64.3
MSTRG.10031 Avicennia marina HOM05D003956 ORTHO05D004850 5.3e-140 501.5 391 67.0
MD16G1179300 Malus domestica HOM05D003956 ORTHO05D004850 5.3e-140 501.5 386 67.1
Nitab4.5_0000059g0230 Nicotiana tabacum HOM05D003956 ORTHO05D004850 5.3e-140 501.5 403 64.5
Peaxi162Scf00095g00414 Petunia axillaris HOM05D003956 ORTHO05D004850 9.0e-140 500.7 391 66.0
Thecc.04G272600 Theobroma cacao HOM05D003956 ORTHO05D004850 9.0e-140 500.7 394 66.2
Duzib212G0153 Durio zibethinus HOM05D003956 ORTHO05D004850 1.2e-139 500.4 391 66.2
Cc03_g02730 Coffea canephora HOM05D003956 ORTHO05D004850 1.5e-139 500.0 395 65.8
PGR004G0287 Punica granatum HOM05D003956 ORTHO05D004850 2.0e-139 499.6 391 66.5
Eucgr.H03642 Eucalyptus grandis HOM05D003956 ORTHO05D004850 2.6e-139 499.2 391 66.2
Gohir.D10G162900 Gossypium hirsutum HOM05D003956 ORTHO05D004850 2.6e-139 499.2 391 66.5
Actinidia23451 Actinidia chinensis HOM05D003956 ORTHO05D004850 3.4e-139 498.8 391 66.2
Dinv44455 Davidia involucrata HOM05D003956 ORTHO05D004850 4.5e-139 498.4 391 66.8
ECA240G3955 Erigeron canadensis HOM05D003956 ORTHO05D004850 4.5e-139 498.4 391 65.7
Glyma.17G020600 Glycine max HOM05D003956 ORTHO05D004850 5.8e-139 498.0 391 66.5
CSS0033563 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 7.6e-139 497.7 391 66.5
Actinidia32373 Actinidia chinensis HOM05D003956 ORTHO05D004850 9.9e-139 497.3 386 65.5
Cfa015539 Carpinus fangiana HOM05D003956 ORTHO05D004850 1.3e-138 496.9 391 66.0
Psat0ss7919g0200 Pisum sativum HOM05D003956 ORTHO05D004850 1.7e-138 496.5 391 66.2
arahy.Tifrunner.gnm1.ann1.EQKV61 Arachis hypogaea HOM05D003956 ORTHO05D004850 2.2e-138 496.1 383 67.4
Sopen01g032260 Solanum pennellii HOM05D003956 ORTHO05D004850 3.8e-138 495.4 391 65.5
arahy.Tifrunner.gnm1.ann1.YQ8C5N Arachis hypogaea HOM05D003956 ORTHO05D004850 4.9e-138 495.0 383 67.4
CAN.G889.10 Capsicum annuum HOM05D003956 ORTHO05D004850 4.9e-138 495.0 391 65.5
PGSC0003DMG400032107 Solanum tuberosum HOM05D003956 ORTHO05D004850 1.1e-137 493.8 391 65.2
Lsat_1_v5_gn_5_51481 Lactuca sativa HOM05D003956 ORTHO05D004850 1.4e-137 493.4 386 65.3
Sabra10G0012900 Salix brachista HOM05D003956 ORTHO05D004850 1.4e-137 493.4 383 66.3
MSTRG.10030 Avicennia marina HOM05D003956 ORTHO05D004850 2.4e-137 492.7 391 65.7
CANSAT78G1736 Cannabis sativa HOM05D003956 ORTHO05D004850 2.4e-137 492.7 391 65.0
Lj4g0014830 Lotus japonicus HOM05D003956 ORTHO05D004850 2.4e-137 492.7 391 66.0
MD16G1179400 Malus domestica HOM05D003956 ORTHO05D004850 2.4e-137 492.7 386 65.8
TPR.G28132 Trifolium pratense HOM05D003956 ORTHO05D004850 2.4e-137 492.7 391 65.2
TWI09G0935 Tripterygium wilfordii HOM05D003956 ORTHO05D004850 2.4e-137 492.7 391 65.2
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 3.2e-137 492.3 391 66.0
Potri.010G027800 Populus trichocarpa HOM05D003956 ORTHO05D004850 3.2e-137 492.3 391 65.7
Glyma.07G253700 Glycine max HOM05D003956 ORTHO05D004850 5.4e-137 491.5 391 65.5
Solyc01g080460.3 Solanum lycopersicum HOM05D003956 ORTHO05D004850 5.4e-137 491.5 391 65.0
SGA_v2.0_scaffold86G26866 Striga asiatica HOM05D003956 ORTHO05D004850 5.4e-137 491.5 325 79.7
Duzib151G0049 Durio zibethinus HOM05D003956 ORTHO05D004850 7.1e-137 491.1 391 65.2
MD13G1177500 Malus domestica HOM05D003956 ORTHO05D004850 7.1e-137 491.1 420 61.9
Sc25g0004550 Simmondsia chinensis HOM05D003956 ORTHO05D004850 9.3e-137 490.7 391 65.0
Aqoxy2G03183 Aquilegia oxysepala HOM05D003956 ORTHO05D004850 2.7e-136 489.2 391 65.2
Nn4g26122 Nelumbo nucifera HOM05D003956 ORTHO05D004850 2.7e-136 489.2 391 64.2
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 3.5e-136 488.8 383 64.5
Actinidia40209 Actinidia chinensis HOM05D003956 ORTHO05D004850 1.0e-135 487.3 391 65.2
VMungo1215G0684 Vigna mungo HOM05D003956 ORTHO05D004850 1.0e-135 487.3 391 65.0
AUR62035456 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.3e-135 486.9 437 59.3
Nitab4.5_0010477g0010 Nicotiana tabacum HOM05D003956 ORTHO05D004850 1.8e-135 486.5 418 61.7
Lalb_Chr13g0303991 Lupinus albus HOM05D003956 ORTHO05D004850 2.3e-135 486.1 391 64.7
RcHm_v2.0_Chr4g0420131 Rosa chinensis HOM05D003956 ORTHO05D004850 3.9e-135 485.3 391 63.2
vmacro15287 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 1.9e-134 483.0 395 62.0
Phvul.003G098200 Phaseolus vulgaris HOM05D003956 ORTHO05D004850 5.6e-134 481.5 391 64.7
QL06p005921 Quercus lobata HOM05D003956 ORTHO05D004850 1.3e-133 480.3 391 63.9
FvH4_4g16670 Fragaria vesca HOM05D003956 ORTHO05D004850 2.1e-133 479.6 391 62.7
FAN12G0499 Fragaria x ananassa HOM05D003956 ORTHO05D004850 2.1e-133 479.6 391 62.7
FAN12G2270 Fragaria x ananassa HOM05D003956 ORTHO05D004850 2.1e-133 479.6 391 62.7
unitig_749.g14056 Utricularia gibba HOM05D003956 ORTHO05D004850 2.1e-133 479.6 391 63.9
THA.LOC104820228 Tarenaya hassleriana HOM05D003956 ORTHO05D004850 2.8e-133 479.2 391 62.7
FAN17G1489 Fragaria x ananassa HOM05D003956 ORTHO05D004850 3.7e-133 478.8 391 62.7
Sp7g13780 Schrenkiella parvula HOM05D003956 ORTHO05D004850 4.8e-133 478.4 390 63.3
PSO170G3340 Papaver somniferum HOM05D003956 ORTHO05D004850 1.1e-132 477.2 391 62.9
PSO302G0065 Papaver somniferum HOM05D003956 ORTHO05D004850 1.4e-132 476.9 391 62.9
FAN07G1911 Fragaria x ananassa HOM05D003956 ORTHO05D004850 1.8e-132 476.5 391 62.4
Aa31LG9G1910 Aethionema arabicum HOM05D003956 ORTHO05D004850 4.0e-132 475.3 391 62.9
FAN22G1243 Fragaria x ananassa HOM05D003956 ORTHO05D004850 6.9e-132 474.6 391 62.4
ATR0626G228 Amborella trichopoda HOM05D003956 ORTHO05D004850 1.2e-131 473.8 391 62.4
arahy.Tifrunner.gnm1.ann1.I3NY02 Arachis hypogaea HOM05D003956 ORTHO05D004850 3.4e-131 472.2 383 64.0
Lj3C806G12 Lonicera japonica HOM05D003956 ORTHO05D004850 3.4e-131 472.2 370 65.4
AT4G15530 Arabidopsis thaliana HOM05D003956 ORTHO05D004850 5.8e-131 471.5 390 62.6
Thhalv10024330m.g Eutrema salsugineum HOM05D003956 ORTHO05D004850 5.8e-131 471.5 390 62.8
Cpa.g.sc16.74 Carica papaya HOM05D003956 ORTHO05D004850 1.0e-130 470.7 391 62.4
CDE08G0632 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 1.7e-130 469.9 391 61.1
Hund19586 Selenicereus undatus HOM05D003956 ORTHO05D004850 2.2e-130 469.5 391 61.4
AL7G39990 Arabidopsis lyrata HOM05D003956 ORTHO05D004850 4.9e-130 468.4 390 62.1
CARHR222330 Cardamine hirsuta HOM05D003956 ORTHO05D004850 6.5e-130 468.0 390 61.8
Zm00001eb287770 Zea mays HOM05D003956 ORTHO05D004850 1.9e-129 466.5 391 61.1
Os05g0405000 Oryza sativa ssp. japonica HOM05D003956 ORTHO05D004850 4.2e-129 465.3 391 60.4
Carub.0007s2635 Capsella rubella HOM05D003956 ORTHO05D004850 7.1e-129 464.5 390 61.8
Duzib151G0209 Durio zibethinus HOM05D003956 ORTHO05D004850 1.2e-128 463.8 391 62.1
BcaC09g50248 Brassica carinata HOM05D003956 ORTHO05D004850 6.0e-128 461.5 390 61.3
C01p27430 Brassica napus HOM05D003956 ORTHO05D004850 6.0e-128 461.5 390 61.3
BcaNung00266 Brassica carinata HOM05D003956 ORTHO05D004850 7.9e-128 461.1 390 61.3
A01p22040 Brassica napus HOM05D003956 ORTHO05D004850 1.0e-127 460.7 390 61.0
A03p49170 Brassica napus HOM05D003956 ORTHO05D004850 1.0e-127 460.7 390 60.8
BraA01t02110Z Brassica rapa HOM05D003956 ORTHO05D004850 1.0e-127 460.7 390 61.0
BraA03t14011Z Brassica rapa HOM05D003956 ORTHO05D004850 1.0e-127 460.7 390 60.8
CSS0013368 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 1.0e-127 460.7 364 64.8
Zm00001eb349810 Zea mays HOM05D003956 ORTHO05D004850 1.0e-127 460.7 391 60.6
BcaC06g32940 Brassica carinata HOM05D003956 ORTHO05D004850 3.9e-127 458.8 390 60.5
C07p47210 Brassica napus HOM05D003956 ORTHO05D004850 3.9e-127 458.8 390 60.8
BolC7t45243H Brassica oleracea HOM05D003956 ORTHO05D004850 3.9e-127 458.8 390 60.8
Thecc.04G272800 Theobroma cacao HOM05D003956 ORTHO05D004850 2.5e-126 456.1 391 61.6
SMO351G0542 Selaginella moellendorffii HOM05D003956 ORTHO05D004850 3.3e-126 455.7 391 59.6
BolC1t02682H Brassica oleracea HOM05D003956 ORTHO05D004850 7.4e-126 454.5 397 60.2
CDE02G0811 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 1.3e-125 453.8 408 57.4
Eucgr.B01186 Eucalyptus grandis HOM05D003956 ORTHO05D004850 1.3e-125 453.8 391 60.9
Pp3c5_22540 Physcomitrium patens HOM05D003956 ORTHO05D004850 2.8e-125 452.6 391 60.4
DCAR_023283 Daucus carota HOM05D003956 ORTHO05D004850 1.2e-123 447.2 383 61.9
AagrBONN_evm.TU.Sc2ySwM_228.3276 Anthoceros agrestis HOM05D003956 ORTHO05D004850 1.5e-123 446.8 391 59.3
unitig_26.g8936 Utricularia gibba HOM05D003956 ORTHO05D004850 3.4e-123 445.7 349 67.3
PGR031G3666 Punica granatum HOM05D003956 ORTHO05D004850 1.0e-122 444.1 391 58.8
Ah.11g043140 Amaranthus hybridus HOM05D003956 ORTHO05D004850 1.7e-122 443.4 368 63.3
BcaC09g50243 Brassica carinata HOM05D003956 ORTHO05D004850 2.9e-122 442.6 396 59.1
Mapoly0009s0124 Marchantia polymorpha HOM05D003956 ORTHO05D004850 2.9e-122 442.6 391 59.8
Psat4g028880 Pisum sativum HOM05D003956 ORTHO05D004850 1.6e-120 436.8 364 61.0
CSS0018237 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 1.0e-114 417.5 396 58.6
MCO12G211 Micromonas commoda HOM05D003956 ORTHO05D004850 3.3e-110 402.5 391 52.9
Hma1.2p1_2025F.1_g311530 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 2.6e-107 392.9 389 56.3
arahy.Tifrunner.gnm1.ann1.DC6B04 Arachis hypogaea HOM05D003956 ORTHO05D004850 4.7e-104 382.1 383 54.8
Cre17.g734548 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 7.0e-100 368.2 392 49.2
TPR.G28133 Trifolium pratense HOM05D003956 ORTHO05D004850 3.8e-98 362.5 329 58.7
Gohir.A10G105700 Gossypium hirsutum HOM05D003956 ORTHO05D004850 4.0e-87 325.9 268 61.2
Medtr4g118355 Medicago truncatula HOM05D003956 ORTHO05D004850 2.0e-83 313.5 218 74.8
arahy.Tifrunner.gnm1.ann1.9WT78J Arachis hypogaea HOM05D003956 ORTHO05D004850 4.5e-83 312.4 302 57.3
BcaC06g33414 Brassica carinata HOM05D003956 ORTHO05D004850 7.7e-83 311.6 292 57.9
AUR62034328 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.1e-81 307.8 316 54.1
Cre10.g424750 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 1.2e-80 304.3 401 44.4
MCO01G687 Micromonas commoda HOM05D003956 ORTHO05D004850 2.4e-68 263.5 401 40.9
CBR_g50184 Chara braunii HOM05D003956 ORTHO05D004850 7.8e-59 231.9 268 48.5
arahy.Tifrunner.gnm1.ann1.HZTZ4X Arachis hypogaea HOM05D003956 ORTHO05D004850 1.4e-55 221.1 253 52.2
arahy.Tifrunner.gnm1.ann1.7LSJ4G Arachis hypogaea HOM05D003956 ORTHO05D004850 1.9e-52 210.7 179 65.4
arahy.Tifrunner.gnm1.ann1.989M5Y Arachis hypogaea HOM05D003956 ORTHO05D004850 6.0e-51 205.7 186 59.7
Medtr4g118350 Medicago truncatula HOM05D003956 ORTHO05D004850 2.3e-42 177.2 111 72.1
Lsat_1_v5_gn_2_81921 Lactuca sativa HOM05D005278 ORTHO05D006500 3.8e-29 133.3 87 70.1
arahy.Tifrunner.gnm1.ann1.G5444S Arachis hypogaea HOM05D003956 ORTHO05D004850 4.5e-22 109.8 90 65.6
Pp3s196_40 Physcomitrium patens HOM05D003956 ORTHO05D044360 2.5e-17 94.0 309 28.8
arahy.Tifrunner.gnm1.ann1.S9XVUY Arachis hypogaea HOM05D003956 ORTHO05D004850 3.2e-12 77.0 165 33.3
TPR.G26738 Trifolium pratense HOM05D003956 ORTHO05D000576 4.2e-12 76.6 50 68.0
SGA_v2.0_scaffold86G26869 Striga asiatica HOM05D000924 ORTHO05D001209 6.0e-11 72.8 40 92.5
arahy.Tifrunner.gnm1.ann1.57CL3B Arachis hypogaea HOM05D003956 ORTHO05D004850 3.9e-10 70.1 51 66.7
arahy.Tifrunner.gnm1.ann1.V4Y3U4 Arachis hypogaea HOM05D003956 ORTHO05D004850 5.1e-10 69.7 48 70.8
arahy.Tifrunner.gnm1.ann1.GGZS5I Arachis hypogaea HOM05D003956 ORTHO05D004850 1.9e-09 67.8 68 57.4


User provided reference genes

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