Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 4.2e-245 850.9 424 100.0
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 3.8e-185 651.7 424 75.2
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.4e-179 633.3 424 72.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.9e-176 622.9 432 71.5
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.6e-175 619.8 432 71.3
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.6e-175 619.8 434 70.5
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.5e-175 618.6 432 71.3
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 4.6e-175 618.2 432 71.3
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 3.9e-174 615.1 427 69.6
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 6.6e-174 614.4 430 70.0
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.1e-173 613.6 432 70.4
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.1e-173 613.6 429 71.1
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.1e-173 613.6 431 69.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 2.5e-173 612.5 430 71.2
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 7.3e-173 610.9 432 71.5
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 7.3e-173 610.9 422 70.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.6e-172 609.8 429 70.6
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.6e-172 609.8 429 71.1
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 3.6e-172 608.6 429 68.3
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 4.8e-172 608.2 435 69.2
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 8.1e-172 607.4 433 70.0
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 8.1e-172 607.4 427 70.7
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-171 607.1 427 67.4
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.4e-171 606.7 431 70.8
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 4.0e-171 605.1 428 67.1
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 7.6e-170 600.9 429 69.9
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 9.9e-170 600.5 424 66.0
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 9.9e-170 600.5 435 68.5
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.3e-169 600.1 430 68.1
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.7e-169 599.7 427 67.7
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 1.7e-169 599.7 434 68.2
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.9e-169 599.0 435 68.3
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 4.9e-169 598.2 434 68.0
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.9e-168 596.3 429 69.5
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 4.2e-168 595.1 435 66.7
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 1.6e-167 593.2 432 69.2
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 3.5e-167 592.0 426 67.1
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 6.0e-167 591.3 430 68.6
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.9e-166 588.6 431 69.4
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 3.9e-166 588.6 432 68.1
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 8.7e-166 587.4 428 65.7
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.9e-165 586.3 416 69.7
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 3.7e-164 582.0 432 67.6
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 4.8e-164 581.6 427 66.3
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 5.3e-163 578.2 403 73.0
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.5e-162 576.6 435 67.6
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 2.9e-161 572.4 434 66.6
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 8.4e-161 570.9 433 68.1
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.4e-160 570.1 427 65.6
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 4.2e-160 568.5 430 66.3
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 5.5e-160 568.2 426 67.8
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 1.2e-159 567.0 428 64.7
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.6e-159 566.6 434 64.5
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 2.7e-159 565.8 406 70.9
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 3.5e-159 565.5 427 67.0
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 3.9e-158 562.0 428 62.6
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 8.7e-158 560.8 426 64.6
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 3.3e-157 558.9 430 65.6
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 2.1e-156 556.2 450 64.2
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 4.8e-156 555.1 428 62.6
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 6.2e-156 554.7 429 66.2
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.4e-155 553.5 429 65.5
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 1.8e-155 553.1 428 64.3
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 5.3e-155 551.6 429 64.8
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 1.3e-153 547.0 424 64.4
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.7e-153 546.6 424 64.6
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 3.2e-152 542.3 425 61.4
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 3.2e-152 542.3 425 61.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.2e-151 540.4 425 62.6
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 4.6e-151 538.5 425 61.2
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.3e-150 537.0 426 62.7
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 3.9e-150 535.4 427 60.2
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 8.7e-150 534.3 428 63.3
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 8.7e-150 534.3 345 75.7
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.1e-149 533.9 425 60.5
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 1.3e-148 530.4 419 61.8
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 1.6e-148 530.0 427 60.4
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 1.4e-147 526.9 432 62.7
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.4e-147 526.9 419 61.8
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 3.1e-147 525.8 426 59.6
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 2.0e-146 523.1 425 60.2
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.0e-145 520.8 329 75.4
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 2.5e-144 516.2 426 58.7
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 7.2e-144 514.6 395 65.8
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.0e-142 510.8 423 65.5
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.1e-141 507.3 417 61.6
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 9.7e-141 504.2 456 57.2
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 9.7e-141 504.2 410 66.6
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 7.7e-138 494.6 385 66.5
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 1.3e-137 493.8 439 60.1
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 2.5e-136 489.6 420 60.7
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 5.5e-136 488.4 419 57.8
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 1.2e-135 487.3 405 60.0
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 2.7e-135 486.1 403 60.3
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.0e-134 484.2 416 60.6
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.7e-132 476.9 424 55.0
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 8.2e-132 474.6 403 58.8
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 1.8e-126 456.8 419 59.2
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 2.0e-125 453.4 325 69.5
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 5.7e-125 451.8 424 55.0
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 1.7e-108 397.1 263 73.0
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 4.2e-104 382.5 306 64.4
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 5.5e-104 382.1 425 49.6
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.2e-101 374.4 398 50.8
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 2.9e-97 359.8 366 51.1
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 2.3e-89 333.6 428 44.2
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 1.4e-86 324.3 218 68.3
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 9.8e-85 318.2 320 54.7
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 3.6e-79 299.7 425 42.4
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 6.0e-74 282.3 302 47.7
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.3e-64 248.8 199 58.8
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 1.2e-53 214.9 128 77.3
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 1.5e-53 214.5 134 72.4
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.3e-52 211.5 167 59.9
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.9e-48 197.6 225 48.4
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 3.5e-42 176.8 157 59.2
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.0e-33 148.7 125 57.6
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.3e-33 147.5 125 57.6
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.3e-32 143.3 82 81.7
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 1.2e-29 135.2 90 68.9
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 2.5e-27 127.5 134 50.7
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 5.5e-27 126.3 91 78.0
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 1.4e-17 95.1 105 55.2
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 1.7e-15 88.2 53 69.8
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 1.2e-10 72.0 49 63.3
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 3.0e-09 67.4 88 43.2


User provided reference genes

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