Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 4.0e-79 298.1 161 100.0
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 1.9e-73 279.3 161 89.4
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 2.1e-72 275.8 161 88.8
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 2.8e-72 275.4 161 88.8
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 1.2e-70 270.0 161 87.0
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 3.1e-15 85.9 113 41.6
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 5.3e-15 85.1 122 38.5
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 1.2e-14 84.0 164 32.3
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 3.4e-14 82.4 114 38.6
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 3.4e-14 82.4 91 41.8
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 3.4e-14 82.4 89 43.8
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 5.9e-14 81.6 71 47.9
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 2.9e-13 79.3 100 40.0
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 2.9e-13 79.3 100 40.0
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 3.8e-13 79.0 97 39.2
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 8.5e-13 77.8 139 34.5
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 1.4e-12 77.0 89 41.6
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 1.4e-12 77.0 100 38.0
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 3.2e-12 75.9 114 37.7
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 2.6e-09 66.2 106 34.9
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 2.6e-09 66.2 106 34.9
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 4.4e-09 65.5 95 36.8
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 2.2e-08 63.2 60 50.0
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-08 62.8 76 43.4
Psat3g069680 Pisum sativum HOM05D018012 ORTHO05D000309 4.8e-08 62.0 103 39.8
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 8.2e-08 61.2 69 42.0
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 8.2e-08 61.2 74 37.8
Psat0s2572g0080 Pisum sativum HOM05D018012 ORTHO05D000309 8.2e-08 61.2 103 39.8
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 1.1e-07 60.8 90 33.3
SalBow4G0405 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.1e-07 60.8 60 45.0
SalBow7G0742 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.1e-07 60.8 132 30.3
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-07 60.5 76 42.1
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 1.8e-07 60.1 104 33.7
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 1.8e-07 60.1 91 34.1
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-07 59.7 73 42.5
SalBow7G0033 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.4e-07 59.7 66 40.9
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 4.1e-07 58.9 86 37.2
SalBow5G4834 Salvia bowleyana HOM05D058812 ORTHO05D009453 4.1e-07 58.9 64 42.2
SGA_v2.0_scaffold139G35420 Striga asiatica HOM05D018395 ORTHO05D011912 4.1e-07 58.9 55 47.3
SGA_v2.0_scaffold14G06988 Striga asiatica HOM05D018395 ORTHO05D011912 4.1e-07 58.9 55 47.3
SGA_v2.0_scaffold223G42854 Striga asiatica HOM05D018395 ORTHO05D011912 4.1e-07 58.9 55 47.3
SGA_v2.0_scaffold22G09774 Striga asiatica HOM05D018395 ORTHO05D011912 4.1e-07 58.9 55 47.3
SGA_v2.0_scaffold332G48976 Striga asiatica HOM05D018395 ORTHO05D011912 4.1e-07 58.9 55 47.3
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 5.3e-07 58.5 103 33.0
Nitab4.5_0007534g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.3e-07 58.5 82 37.8
Peaxi162Scf01021g00121 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-07 58.5 72 40.3
HanXRQChr01g0001121 Helianthus annuus HOM05D001383 ORTHO05D000309 7.0e-07 58.2 84 36.9
Eucgr.L00906 Eucalyptus grandis HOM05D015495 ORTHO05D000309 9.1e-07 57.8 90 31.1
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 9.1e-07 57.8 69 40.6
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 9.1e-07 57.8 80 40.0
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 9.1e-07 57.8 76 42.1
SalBow8G4103 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.2e-06 57.4 149 26.8
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 1.6e-06 57.0 69 40.6
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 57.0 76 42.1
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 57.0 66 42.4
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 57.0 61 44.3
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.0e-06 56.6 91 37.4
Nitab4.5_0001226g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.0e-06 56.6 45 44.4
Peaxi162Scf00002g02917 Petunia axillaris HOM05D001383 ORTHO05D000309 2.0e-06 56.6 53 49.1
Rhsim03G0135300 Rhododendron simsii HOM05D010572 ORTHO05D012753 2.0e-06 56.6 123 26.8
SalBow6G6190 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.0e-06 56.6 122 30.3
SalBow7G3697 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.0e-06 56.6 76 38.2
Gohir.A10G176350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.6e-06 56.2 69 39.1
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 62 43.5
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 53 43.4
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 76 42.1
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 53 43.4
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 53 43.4
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 56.2 53 43.4
SalBow1G0137 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.6e-06 56.2 73 38.4
SalBow7G4595 Salvia bowleyana HOM05D009427 ORTHO05D009453 2.6e-06 56.2 108 32.4
Aqoxy7G03573 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 3.5e-06 55.8 100 32.0
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.5e-06 55.8 121 28.9
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 3.5e-06 55.8 89 37.1
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 3.5e-06 55.8 82 32.9
Gohir.A13G017966 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.5e-06 55.8 69 39.1
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 3.5e-06 55.8 61 39.3
SalBow1G3139 Salvia bowleyana HOM05D009427 ORTHO05D009453 3.5e-06 55.8 73 39.7
SalBow3G1995 Salvia bowleyana HOM05D008808 ORTHO05D009453 3.5e-06 55.8 77 39.0
SalBow6G1604 Salvia bowleyana HOM05D008808 ORTHO05D009453 3.5e-06 55.8 77 39.0
SalBow6G4476 Salvia bowleyana HOM05D010847 ORTHO05D009453 3.5e-06 55.8 90 34.4
SalBow6G5285 Salvia bowleyana HOM05D009427 ORTHO05D009453 3.5e-06 55.8 128 32.0
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 4.5e-06 55.5 76 40.8
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 4.5e-06 55.5 76 40.8
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 4.5e-06 55.5 53 43.4
QL02p068827 Quercus lobata HOM05D007742 ORTHO05D004072 4.5e-06 55.5 42 45.2
SalBow4G2148 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.5e-06 55.5 68 38.2
SalBow4G2226 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.5e-06 55.5 68 38.2
SalBow7G0377 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.5e-06 55.5 69 39.1
SalBow7G0744 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.5e-06 55.5 69 39.1
SalBow8G4000 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.5e-06 55.5 69 39.1
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 5.9e-06 55.1 104 28.8
Gohir.A13G143901 Gossypium hirsutum HOM05D001383 ORTHO05D000309 5.9e-06 55.1 76 39.5
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.9e-06 55.1 101 39.6
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.9e-06 55.1 65 36.9
Nitab4.5_0001931g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.9e-06 55.1 45 44.4
Nitab4.5_0003017g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.9e-06 55.1 84 32.1
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 7.7e-06 54.7 101 31.7
ECA238G1462 Erigeron canadensis HOM05D012511 ORTHO05D013076 7.7e-06 54.7 101 33.7
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 7.7e-06 54.7 54 46.3
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 7.7e-06 54.7 54 46.3
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 7.7e-06 54.7 96 36.5
Nitab4.5_0002043g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 7.7e-06 54.7 69 34.8


User provided reference genes

Program Settings