Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26651 Striga asiatica HOM05D002277 ORTHO05D001770 3.2e-63 245.4 166 100.0
MSTRG.5517 Avicennia marina HOM05D002277 ORTHO05D001770 2.6e-17 92.8 215 34.4
Oeu003223.1 Olea europaea HOM05D002277 ORTHO05D001770 2.5e-15 86.3 182 35.2
Oeu024724.1 Olea europaea HOM05D002277 ORTHO05D001770 3.2e-15 85.9 188 37.2
Oeu003236.1 Olea europaea HOM05D002277 ORTHO05D001770 3.6e-14 82.4 183 33.9
Lsat_1_v5_gn_5_148320 Lactuca sativa HOM05D002277 ORTHO05D001770 4.3e-12 75.5 207 32.9
HanXRQChr11g0337191 Helianthus annuus HOM05D002277 ORTHO05D001770 7.4e-12 74.7 204 40.7
MSTRG.18959 Avicennia marina HOM05D002277 ORTHO05D001770 1.7e-11 73.6 111 39.6
Cc06_g00560 Coffea canephora HOM05D002277 ORTHO05D001770 2.2e-11 73.2 109 39.4
Lj2C62G11 Lonicera japonica HOM05D002277 ORTHO05D001770 8.2e-11 71.2 162 34.6
ECA248G3625 Erigeron canadensis HOM05D002277 ORTHO05D001770 1.4e-10 70.5 206 37.9
Migut.J00065 Erythranthe guttata HOM05D002277 ORTHO05D001770 1.8e-10 70.1 209 39.7
Oeu064877.1 Olea europaea HOM05D002277 ORTHO05D001770 5.3e-10 68.6 185 34.1
PGSC0003DMG400026571 Solanum tuberosum HOM05D002277 ORTHO05D001770 1.5e-09 67.0 173 37.0
QL07p032796 Quercus lobata HOM05D002277 ORTHO05D001770 3.4e-09 65.9 57 50.9
unitig_749.g14087 Utricularia gibba HOM05D002277 ORTHO05D001770 3.4e-09 65.9 119 38.7
Cfa017063 Carpinus fangiana HOM05D002277 ORTHO05D001770 5.9e-09 65.1 131 35.9
Gohir.A10G149200 Gossypium hirsutum HOM05D002277 ORTHO05D001770 5.9e-09 65.1 94 42.6
Nitab4.5_0007794g0020 Nicotiana tabacum HOM05D002277 ORTHO05D001770 5.9e-09 65.1 42 71.4
Actinidia29050 Actinidia chinensis HOM05D002277 ORTHO05D001770 7.7e-09 64.7 182 31.9
COL.COLO4_30002 Corchorus olitorius HOM05D002277 ORTHO05D001770 7.7e-09 64.7 115 36.5
TAR623G1362 Trochodendron aralioides HOM05D002277 ORTHO05D001770 1.3e-08 63.9 204 30.9
Prupe.6G289800 Prunus persica HOM05D002277 ORTHO05D001770 1.7e-08 63.5 54 55.6
Hma1.2p1_1052F.1_g252370 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 2.2e-08 63.2 172 30.8
PGR004G0074 Punica granatum HOM05D002277 ORTHO05D001770 2.2e-08 63.2 39 69.2
Sopen09g015550 Solanum pennellii HOM05D002277 ORTHO05D001770 2.2e-08 63.2 42 69.0
Gohir.D10G117600 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.9e-08 62.8 94 40.4
Haze_21138 Corylus avellana HOM05D002277 ORTHO05D001770 3.8e-08 62.4 91 40.7
Haze_21144 Corylus avellana HOM05D002277 ORTHO05D001770 3.8e-08 62.4 91 40.7
Haze_21148 Corylus avellana HOM05D002277 ORTHO05D001770 3.8e-08 62.4 91 40.7
Ciclev10033390m.g Citrus clementina HOM05D002277 ORTHO05D001770 5.0e-08 62.0 98 37.8
FvH4_6g10240 Fragaria vesca HOM05D002277 ORTHO05D001770 5.0e-08 62.0 46 54.3
FAN14G3640 Fragaria x ananassa HOM05D002277 ORTHO05D001770 5.0e-08 62.0 46 54.3
DCAR_028908 Daucus carota HOM05D002277 ORTHO05D001770 6.5e-08 61.6 42 64.3
HPP92_013855 Vanilla planifolia HOM05D002277 ORTHO05D001770 6.5e-08 61.6 40 65.0
HPP92_013870 Vanilla planifolia HOM05D002277 ORTHO05D001770 6.5e-08 61.6 40 65.0
QL08p064469 Quercus lobata HOM05D002277 ORTHO05D001770 8.5e-08 61.2 160 40.0
Duzib268G1048 Durio zibethinus HOM05D002277 ORTHO05D001770 1.1e-07 60.8 39 64.1
FAN02G0282 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.1e-07 60.8 46 52.2
TAR629G0672 Trochodendron aralioides HOM05D002277 ORTHO05D001770 1.1e-07 60.8 204 30.9
TAR636G1485 Trochodendron aralioides HOM05D002277 ORTHO05D001770 1.1e-07 60.8 204 30.9
Nn2g13334 Nelumbo nucifera HOM05D002277 ORTHO05D001770 2.5e-07 59.7 113 37.2
Potri.016G133200 Populus trichocarpa HOM05D002277 ORTHO05D001770 2.5e-07 59.7 142 32.4
RcHm_v2.0_Chr3g0460991 Rosa chinensis HOM05D002277 ORTHO05D001770 2.5e-07 59.7 45 53.3
ATR0681G220 Amborella trichopoda HOM05D002277 ORTHO05D001770 3.2e-07 59.3 40 60.0
Gorai.005G006100 Gossypium raimondii HOM05D002277 ORTHO05D001770 3.2e-07 59.3 48 58.3
Thecc.04G155300 Theobroma cacao HOM05D002277 ORTHO05D001770 3.2e-07 59.3 60 48.3
HPP92_011988 Vanilla planifolia HOM05D002277 ORTHO05D001770 3.2e-07 59.3 97 39.2
Thecc.10G174900 Theobroma cacao HOM05D002277 ORTHO05D001770 4.2e-07 58.9 95 36.8
Duzib212G0079 Durio zibethinus HOM05D002277 ORTHO05D001770 5.5e-07 58.5 39 61.5
Sabra06G0083400 Salix brachista HOM05D002277 ORTHO05D001770 5.5e-07 58.5 55 50.9
TAR633G2754 Trochodendron aralioides HOM05D002277 ORTHO05D001770 5.5e-07 58.5 208 32.7
CAN.G180.3 Capsicum annuum HOM05D002277 ORTHO05D001770 7.2e-07 58.2 50 56.0
Manes.07G138400 Manihot esculenta HOM05D002277 ORTHO05D001770 7.2e-07 58.2 96 34.4
TAR287G0001 Trochodendron aralioides HOM05D002277 ORTHO05D001770 7.2e-07 58.2 39 64.1
Potri.006G107200 Populus trichocarpa HOM05D002277 ORTHO05D001770 9.4e-07 57.8 113 35.4
VMungo0647G0912 Vigna mungo HOM05D002277 ORTHO05D001770 9.4e-07 57.8 40 67.5
Cfa001229 Carpinus fangiana HOM05D002277 ORTHO05D001770 1.2e-06 57.4 164 40.9
Ciclev10012858m.g Citrus clementina HOM05D002277 ORTHO05D001770 1.2e-06 57.4 96 37.5
MBI15_g33145_MAGBIO Magnolia biondii HOM05D002277 ORTHO05D001770 1.2e-06 57.4 54 50.0
CSS0032322 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 1.6e-06 57.0 99 37.4
Gohir.A10G181050 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.6e-06 57.0 93 33.3
Phvul.008G218400 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 1.6e-06 57.0 40 65.0
Sabra04G0150900 Salix brachista HOM05D002277 ORTHO05D001770 1.6e-06 57.0 154 35.1
Ah.08g209750 Amaranthus hybridus HOM05D002277 ORTHO05D001770 2.1e-06 56.6 48 56.2
EL10Ac7g17051 Beta vulgaris HOM05D002277 ORTHO05D001770 2.1e-06 56.6 39 59.0
CANSAT56G3800 Cannabis sativa HOM05D002277 ORTHO05D001770 2.1e-06 56.6 39 56.4
Duzib128G0618 Durio zibethinus HOM05D002277 ORTHO05D001770 2.1e-06 56.6 91 36.3
Gohir.A05G402100 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.1e-06 56.6 53 50.9
Gohir.D04G013500 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.1e-06 56.6 53 50.9
Gorai.012G015800 Gossypium raimondii HOM05D002277 ORTHO05D001770 2.1e-06 56.6 53 50.9
CiPaw.10G163800 Carya illinoinensis HOM05D002277 ORTHO05D001770 2.7e-06 56.2 58 44.8
CDE12G0812 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 2.7e-06 56.2 39 61.5
Gorai.011G210700 Gossypium raimondii HOM05D002277 ORTHO05D001770 2.7e-06 56.2 93 33.3
Manes.09G115500 Manihot esculenta HOM05D002277 ORTHO05D001770 2.7e-06 56.2 97 37.1
Sabra13G0072000 Salix brachista HOM05D002277 ORTHO05D001770 2.7e-06 56.2 97 33.0
unitig_27.g24879 Utricularia gibba HOM05D002277 ORTHO05D001770 2.7e-06 56.2 127 33.9
VMungo0331G0789 Vigna mungo HOM05D002277 ORTHO05D001770 2.7e-06 56.2 96 39.6
Potri.013G083101 Populus trichocarpa HOM05D002277 ORTHO05D001770 3.6e-06 55.8 94 34.0
ClCG04G006490 Citrullus lanatus HOM05D002277 ORTHO05D001770 4.7e-06 55.5 55 52.7
COL.COLO4_03891 Corchorus olitorius HOM05D002277 ORTHO05D001770 4.7e-06 55.5 85 38.8
CDE04G2385 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 6.1e-06 55.1 38 63.2
Glyma.18G021200 Glycine max HOM05D002277 ORTHO05D001770 6.1e-06 55.1 103 35.0
Gorai.011G129500 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.1e-06 55.1 103 36.9
Gorai.013G006000 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.1e-06 55.1 39 61.5
Hma1.2p1_1240F.1_g269550 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 6.1e-06 55.1 39 69.2
Lalb_Chr04g0250281 Lupinus albus HOM05D002277 ORTHO05D001770 6.1e-06 55.1 92 40.2
RcHm_v2.0_Chr1g0371651 Rosa chinensis HOM05D002277 ORTHO05D001770 6.1e-06 55.1 51 49.0
CiPaw.09G218200 Carya illinoinensis HOM05D002277 ORTHO05D001770 7.9e-06 54.7 91 41.8
FAN06G1120 Fragaria x ananassa HOM05D002277 ORTHO05D001770 7.9e-06 54.7 38 60.5
FAN10G1465 Fragaria x ananassa HOM05D002277 ORTHO05D001770 7.9e-06 54.7 38 60.5
Gohir.A13G005650 Gossypium hirsutum HOM05D002277 ORTHO05D001770 7.9e-06 54.7 38 63.2


User provided reference genes

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