Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 0.0e+00 1703.7 879 100.0
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 0.0e+00 1352.8 880 82.6
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 0.0e+00 1169.8 886 72.7
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 0.0e+00 1115.5 887 69.6
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 0.0e+00 1103.2 891 70.4
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 4.4e-289 998.0 903 61.7
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.2e-288 995.7 905 62.1
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.2e-288 995.7 905 62.1
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 4.9e-288 994.6 910 61.3
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 4.4e-281 971.5 902 61.2
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 7.6e-281 970.7 903 62.7
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.7e-280 969.5 880 63.4
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.8e-280 968.4 909 60.5
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 1.4e-266 923.3 900 60.2
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 5.3e-266 921.4 905 59.1
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.5e-260 903.3 879 59.5
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 4.3e-260 901.7 904 57.2
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.1e-259 899.4 904 57.1
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.1e-258 897.1 905 57.9
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 4.0e-258 895.2 908 58.4
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 2.6e-257 892.5 861 60.9
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 2.5e-255 885.9 901 58.2
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 2.5e-255 885.9 903 58.0
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 2.5e-255 885.9 904 58.5
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 3.2e-255 885.6 895 58.9
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 7.1e-255 884.4 851 60.8
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 2.3e-253 879.4 903 58.0
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.1e-252 877.1 899 59.1
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.9e-252 876.3 786 65.1
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.9e-252 876.3 899 59.2
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.6e-251 873.2 902 58.2
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 2.0e-249 866.3 903 58.3
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 7.1e-247 857.8 899 58.4
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.6e-246 856.7 908 58.1
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 6.1e-246 854.7 899 58.3
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 1.6e-243 846.7 900 56.7
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 8.2e-243 844.3 882 57.9
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.1e-242 844.0 910 55.7
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-241 840.1 910 55.4
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.0e-241 839.7 897 57.5
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.0e-240 837.4 898 55.8
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.9e-240 835.9 901 56.3
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.4e-239 833.6 899 55.5
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.5e-239 832.8 899 57.5
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.5e-239 832.8 915 54.4
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.6e-238 830.1 897 55.2
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 2.1e-238 829.7 877 57.6
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 2.3e-237 826.2 865 58.0
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.5e-236 823.5 901 55.0
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.3e-235 820.5 899 55.4
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 2.8e-235 819.3 892 54.4
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 6.9e-234 814.7 877 57.5
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 6.9e-234 814.7 877 57.1
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 4.5e-233 812.0 894 55.6
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.3e-232 810.4 903 54.4
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 5.0e-232 808.5 897 54.1
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 8.5e-232 807.7 835 57.6
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.2e-230 803.9 917 53.5
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.7e-230 802.0 898 55.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 7.9e-230 801.2 908 56.1
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.0e-228 796.6 863 54.8
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 4.1e-226 788.9 914 52.4
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.5e-225 785.4 897 55.2
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 1.1e-223 780.8 913 52.2
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.5e-223 780.4 799 58.9
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 4.2e-223 778.9 904 53.5
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 6.1e-222 775.0 916 52.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 6.1e-222 775.0 860 56.6
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 1.0e-221 774.2 845 57.2
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.0e-221 772.7 893 53.5
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.9e-221 772.3 864 56.8
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.1e-220 770.8 904 52.9
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 5.7e-220 768.5 915 52.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 9.7e-220 767.7 924 52.7
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.8e-219 766.1 924 52.6
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.4e-218 763.8 886 53.0
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.6e-217 760.4 920 52.8
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.0e-217 760.0 899 52.8
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 5.9e-217 758.4 903 54.3
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.3e-216 757.3 800 56.8
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.3e-216 757.3 800 56.8
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 1.3e-216 757.3 905 54.1
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.3e-216 757.3 899 52.8
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.0e-216 755.4 893 54.3
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.6e-214 750.4 894 54.3
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 3.6e-214 749.2 902 53.1
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 4.7e-214 748.8 903 52.9
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 6.1e-214 748.4 888 54.5
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 4.0e-213 745.7 902 53.3
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 5.2e-213 745.3 893 53.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 2.6e-212 743.0 904 52.3
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.3e-211 740.7 911 49.9
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 6.3e-211 738.4 844 54.5
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 2.4e-210 736.5 907 51.3
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 4.5e-209 732.3 900 52.1
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 5.5e-207 725.3 859 53.7
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 2.7e-206 723.0 914 49.1
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 8.0e-206 721.5 894 52.1
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 8.8e-205 718.0 901 51.6
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 1.7e-203 713.8 906 51.5
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 3.1e-202 709.5 900 50.2
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.6e-201 707.2 905 51.8
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 2.0e-201 706.8 894 49.2
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 4.5e-201 705.7 867 53.3
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.9e-199 700.3 858 52.9
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 3.0e-197 693.0 857 51.5
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 3.0e-197 693.0 868 51.8
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.2e-196 691.0 899 50.5
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 4.4e-196 689.1 871 51.4
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 9.8e-196 688.0 902 51.0
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 3.5e-193 679.5 845 51.1
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.4e-187 658.7 908 49.8
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.2e-186 656.4 907 49.5
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 7.3e-183 645.2 887 49.4
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 2.6e-180 636.7 898 48.4
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 9.8e-180 634.8 901 48.1
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 3.7e-179 632.9 901 48.4
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 3.3e-175 619.8 896 47.5
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.4e-172 609.4 880 48.3
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.1e-170 604.7 873 48.5
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.2e-169 601.3 776 50.6
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 6.2e-166 589.0 872 47.5
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 4.0e-165 586.3 809 48.8
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 2.6e-164 583.6 848 47.6
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.4e-164 582.8 842 48.1
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 2.9e-163 580.1 905 47.0
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 4.9e-163 579.3 903 45.2
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 2.4e-162 577.0 909 46.8
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 4.6e-161 572.8 730 50.7
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 4.8e-158 562.8 868 46.2
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 7.9e-153 545.4 869 45.7
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 1.0e-152 545.0 735 51.2
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 1.1e-151 541.6 863 45.4
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.9e-151 540.8 904 44.0
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 7.3e-151 538.9 891 45.5
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 7.3e-151 538.9 879 44.7
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 2.1e-150 537.3 809 47.1
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 3.6e-150 536.6 863 45.0
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 1.8e-149 534.3 893 45.0
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 9.0e-149 531.9 850 45.2
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.0e-148 530.8 780 47.3
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.8e-144 517.7 911 43.8
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 1.0e-136 491.9 926 42.2
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 2.3e-136 490.7 923 42.1
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 8.7e-136 488.8 842 44.2
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 9.0e-133 478.8 745 46.0
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 5.9e-132 476.1 895 41.9
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 1.0e-131 475.3 839 41.7
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 2.9e-131 473.8 801 44.4
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 5.7e-119 433.0 767 43.0
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.3e-118 431.8 448 57.6
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 2.2e-115 421.0 829 40.8
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 4.5e-108 396.7 916 38.9
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 5.9e-108 396.4 916 39.4
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.0e-107 395.6 881 38.6
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.0e-107 395.6 921 39.6
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.2e-106 390.2 395 63.0
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.5e-98 364.4 642 46.0
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.2e-97 362.1 784 39.5
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.2e-94 351.3 904 37.6
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 3.7e-94 350.5 894 35.8
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 7.0e-93 346.3 904 37.4
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 7.7e-92 342.8 888 35.9
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 3.0e-88 330.9 354 51.4
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.6e-83 312.8 992 33.1
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 4.9e-78 297.0 493 44.6
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.3e-74 283.9 833 33.6
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.3e-67 262.3 379 48.8
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.4e-64 252.3 357 46.2
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.2e-60 239.2 421 43.7
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.7e-59 235.3 297 47.5
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 3.6e-57 227.6 259 53.3
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.0e-56 224.2 298 47.3
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 5.1e-51 207.2 361 39.6
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 1.2e-49 202.6 294 41.8
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.9e-45 188.7 175 56.0
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.1e-45 186.8 717 31.2
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 7.3e-42 176.8 97 92.8
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 4.0e-40 171.0 179 56.4
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 5.8e-39 167.2 260 53.5
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 8.4e-38 163.3 233 44.2
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.7e-30 139.0 318 35.5
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.1e-17 95.5 136 44.1
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 1.2e-07 63.2 47 66.0


User provided reference genes

Program Settings