Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26642 Striga asiatica HOM05D006353 ORTHO05D007993 1.3e-76 289.7 143 100.0
Migut.J00057 Erythranthe guttata HOM05D006353 ORTHO05D007993 2.3e-41 172.6 136 62.5
MSTRG.18951 Avicennia marina HOM05D006353 ORTHO05D007993 8.6e-41 170.6 135 64.4
SalBow5G5035 Salvia bowleyana HOM05D006353 ORTHO05D007993 2.5e-32 142.5 142 57.0
SalBow5G5483 Salvia bowleyana HOM05D006353 ORTHO05D007993 2.5e-32 142.5 142 57.0
Oeu026960.1 Olea europaea HOM05D006353 ORTHO05D007993 2.3e-25 119.4 136 43.4
Actinidia11518 Actinidia chinensis HOM05D006353 ORTHO05D007993 2.1e-23 112.8 139 45.3
vmacro20360 Vaccinium macrocarpon HOM05D006353 ORTHO05D007993 2.1e-23 112.8 140 44.3
Actinidia29043 Actinidia chinensis HOM05D006353 ORTHO05D007993 4.7e-23 111.7 139 46.0
Rhsim05G0229500 Rhododendron simsii HOM05D006353 ORTHO05D007993 4.7e-23 111.7 140 44.3
Dinv11379 Davidia involucrata HOM05D006353 ORTHO05D007993 6.2e-23 111.3 138 44.9
Dinv25324 Davidia involucrata HOM05D006353 ORTHO05D007993 2.3e-22 109.4 140 45.0
Nitab4.5_0003003g0010 Nicotiana tabacum HOM05D006353 ORTHO05D007993 1.2e-21 107.1 133 44.4
Peaxi162Scf00732g00043 Petunia axillaris HOM05D006353 ORTHO05D007993 9.8e-21 104.0 129 42.6
Duzib212G0771 Durio zibethinus HOM05D006353 ORTHO05D007993 4.1e-19 98.6 149 44.3
CSS0001064 Camellia sinensis var. sinensis HOM05D006353 ORTHO05D007993 5.4e-19 98.2 135 39.3
CSS0032329 Camellia sinensis var. sinensis HOM05D006353 ORTHO05D007993 5.4e-19 98.2 135 39.3
Nitab4.5_0001469g0020 Nicotiana tabacum HOM05D006353 ORTHO05D007993 1.2e-18 97.1 133 41.4
BcaB02g09176 Brassica carinata HOM05D006353 ORTHO05D007993 2.7e-18 95.9 148 41.2
A05p07550 Brassica napus HOM05D006353 ORTHO05D007993 2.7e-18 95.9 148 41.2
C04p09030 Brassica napus HOM05D006353 ORTHO05D007993 2.7e-18 95.9 148 41.2
BolC4t22493H Brassica oleracea HOM05D006353 ORTHO05D007993 2.7e-18 95.9 148 41.2
BraA05t19722Z Brassica rapa HOM05D006353 ORTHO05D007993 2.7e-18 95.9 148 41.2
Sopen09g010850 Solanum pennellii HOM05D006353 ORTHO05D007993 3.5e-18 95.5 135 39.3
BcaC02g12001 Brassica carinata HOM05D006353 ORTHO05D007993 6.0e-18 94.7 148 40.5
PGSC0003DMG400004416 Solanum tuberosum HOM05D006353 ORTHO05D007993 7.8e-18 94.4 134 38.8
Gohir.D10G117100 Gossypium hirsutum HOM05D006353 ORTHO05D007993 3.0e-17 92.4 142 40.1
Gorai.011G129000 Gossypium raimondii HOM05D006353 ORTHO05D007993 3.0e-17 92.4 142 40.1
Gohir.A10G149700 Gossypium hirsutum HOM05D006353 ORTHO05D007993 6.6e-17 91.3 142 40.1
AL4G35790 Arabidopsis lyrata HOM05D006353 ORTHO05D007993 4.3e-16 88.6 144 41.7
Atru.chr8.2382 Acer truncatum HOM05D006353 ORTHO05D007993 5.6e-16 88.2 146 39.7
AT2G38500 Arabidopsis thaliana HOM05D006353 ORTHO05D007993 5.6e-16 88.2 144 41.0
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 7.3e-16 87.8 151 39.1
Cfa017056 Carpinus fangiana HOM05D006353 ORTHO05D007993 9.5e-16 87.4 143 39.2
Thhalv10016859m.g Eutrema salsugineum HOM05D006353 ORTHO05D007993 1.2e-15 87.0 141 41.1
Carub.0004s2049 Capsella rubella HOM05D006353 ORTHO05D007993 2.1e-15 86.3 144 41.0
Aa31LG5G23800 Aethionema arabicum HOM05D006353 ORTHO05D007993 3.6e-15 85.5 141 39.7
CARHR133200 Cardamine hirsuta HOM05D006353 ORTHO05D007993 4.7e-15 85.1 141 41.8
Ciclev10012094m.g Citrus clementina HOM05D006353 ORTHO05D007993 6.2e-15 84.7 139 40.3
Sp4g20840 Schrenkiella parvula HOM05D006353 ORTHO05D007993 8.1e-15 84.3 141 39.7
THA.LOC104806639 Tarenaya hassleriana HOM05D006353 ORTHO05D007993 2.3e-14 82.8 146 38.4
Haze_21157 Corylus avellana HOM05D006353 ORTHO05D007993 3.1e-14 82.4 143 37.8
Thecc.04G154100 Theobroma cacao HOM05D006353 ORTHO05D007993 3.1e-14 82.4 129 39.5
BcaC01g05532 Brassica carinata HOM05D006353 ORTHO05D007993 8.9e-14 80.9 141 39.0
C03p25230 Brassica napus HOM05D006353 ORTHO05D007993 8.9e-14 80.9 141 39.0
BolC3t14918H Brassica oleracea HOM05D006353 ORTHO05D007993 8.9e-14 80.9 141 39.0
A03p21360 Brassica napus HOM05D006353 ORTHO05D007993 1.2e-13 80.5 141 38.3
BraA03t11371Z Brassica rapa HOM05D006353 ORTHO05D007993 1.2e-13 80.5 141 38.3
BcaB02g09177 Brassica carinata HOM05D006353 ORTHO05D007993 1.5e-13 80.1 118 41.5
GSVIVG01030203001 Vitis vinifera HOM05D006353 ORTHO05D007993 3.4e-13 79.0 144 35.4
COL.COLO4_16552 Corchorus olitorius HOM05D006353 ORTHO05D007993 5.8e-13 78.2 156 35.9
QL07p032560 Quercus lobata HOM05D006353 ORTHO05D007993 5.8e-13 78.2 138 39.1
BcaB01g03677 Brassica carinata HOM05D006353 ORTHO05D007993 1.7e-12 76.6 141 39.7
BcaB01g03678 Brassica carinata HOM05D006353 ORTHO05D007993 1.7e-12 76.6 142 38.7
CiPaw.09G219300 Carya illinoinensis HOM05D006353 ORTHO05D007993 8.3e-12 74.3 113 43.4
ECA236G3817 Erigeron canadensis HOM05D006353 ORTHO05D007993 8.3e-12 74.3 122 35.2
HanXRQChr14g0433401 Helianthus annuus HOM05D006353 ORTHO05D007993 8.3e-12 74.3 134 33.6
Nn2g10337 Nelumbo nucifera HOM05D006353 ORTHO05D007993 1.9e-11 73.2 95 46.3
CiPaw.09G219500 Carya illinoinensis HOM05D006353 ORTHO05D007993 2.4e-11 72.8 95 47.4
Sc07g0005810 Simmondsia chinensis HOM05D006353 ORTHO05D007993 3.2e-11 72.4 147 36.1
TWI74G0177 Tripterygium wilfordii HOM05D006353 ORTHO05D007993 5.4e-11 71.6 135 39.3
Ah.08g209640 Amaranthus hybridus HOM05D006353 ORTHO05D007993 9.2e-11 70.9 150 34.7
EL10Ac7g17070 Beta vulgaris HOM05D006353 ORTHO05D007993 1.2e-10 70.5 149 34.2
AUR62006369 Chenopodium quinoa HOM05D006353 ORTHO05D007993 1.6e-10 70.1 149 34.9
Manes.09G116500 Manihot esculenta HOM05D006353 ORTHO05D007993 2.7e-10 69.3 140 33.6
Prupe.6G291400 Prunus persica HOM05D006353 ORTHO05D007993 2.7e-10 69.3 135 38.5
PSO384G2070 Papaver somniferum HOM05D006353 ORTHO05D007993 3.5e-10 68.9 162 31.5
Phvul.008G084100 Phaseolus vulgaris HOM05D006353 ORTHO05D007993 3.5e-10 68.9 96 46.9
Duzib151G0311 Durio zibethinus HOM05D006353 ORTHO05D007993 4.6e-10 68.6 136 37.5
PSO339G6092 Papaver somniferum HOM05D006353 ORTHO05D007993 4.6e-10 68.6 162 30.9
AUR62029702 Chenopodium quinoa HOM05D006353 ORTHO05D007993 6.0e-10 68.2 148 34.5
Eucgr.K01277 Eucalyptus grandis HOM05D006353 ORTHO05D007993 6.0e-10 68.2 97 45.4
Medtr7g072635 Medicago truncatula HOM05D006353 ORTHO05D007993 7.8e-10 67.8 96 43.8
Medtr7g072870 Medicago truncatula HOM05D006353 ORTHO05D007993 7.8e-10 67.8 96 43.8
Ca_07754_v3 Cicer arietinum L. HOM05D006353 ORTHO05D007993 1.0e-09 67.4 96 45.8
Ca_29600_v3 Cicer arietinum L. HOM05D006353 ORTHO05D007993 1.0e-09 67.4 96 45.8
Glyma.18G215200 Glycine max HOM05D006353 ORTHO05D007993 1.3e-09 67.0 96 46.9
Sabra04G0151900 Salix brachista HOM05D006353 ORTHO05D007993 1.3e-09 67.0 143 34.3
Potri.016G134500 Populus trichocarpa HOM05D006353 ORTHO05D007993 2.3e-09 66.2 141 34.0
Lj1g0007888 Lotus japonicus HOM05D006353 ORTHO05D007993 3.0e-09 65.9 96 44.8
Hund19788 Selenicereus undatus HOM05D006353 ORTHO05D007993 6.6e-09 64.7 153 34.0
Lalb_Chr19g0124031 Lupinus albus HOM05D006353 ORTHO05D007993 1.1e-08 63.9 98 42.9
Sed0002935 Sechium edule HOM05D006353 ORTHO05D007993 1.5e-08 63.5 121 39.7
Psat3g120040 Pisum sativum HOM05D006353 ORTHO05D007993 3.3e-08 62.4 81 48.1
arahy.Tifrunner.gnm1.ann1.0YL58U Arachis hypogaea HOM05D006353 ORTHO05D007993 1.2e-07 60.5 95 42.1
arahy.Tifrunner.gnm1.ann1.FA4IPG Arachis hypogaea HOM05D006353 ORTHO05D007993 1.2e-07 60.5 95 42.1
RcHm_v2.0_Chr3g0460831 Rosa chinensis HOM05D006353 ORTHO05D007993 1.2e-07 60.5 125 38.4
MD12G1185800 Malus domestica HOM05D006353 ORTHO05D007993 1.6e-07 60.1 98 44.9
FAN05G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 2.1e-07 59.7 124 39.5
FAN05G5674 Fragaria x ananassa HOM05D006353 ORTHO05D007993 2.1e-07 59.7 124 39.5
PGR004G2035 Punica granatum HOM05D006353 ORTHO05D007993 2.1e-07 59.7 105 34.3
FAN09G0411 Fragaria x ananassa HOM05D006353 ORTHO05D007993 2.8e-07 59.3 124 38.7
Sopen03g039800 Solanum pennellii HOM05D006831 ORTHO05D008256 4.7e-07 58.5 105 31.4
FvH4_6g10130 Fragaria vesca HOM05D006353 ORTHO05D007993 6.2e-07 58.2 123 36.6
FAN14G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 6.2e-07 58.2 123 36.6
Solyc03g120970.3 Solanum lycopersicum HOM05D006831 ORTHO05D008256 1.1e-06 57.4 105 30.5
VMungo1383G2355 Vigna mungo HOM05D006353 ORTHO05D007993 1.1e-06 57.4 96 42.7
PGSC0003DMG400002528 Solanum tuberosum HOM05D006831 ORTHO05D008256 1.4e-06 57.0 105 30.5
Actinidia21708 Actinidia chinensis HOM05D006831 ORTHO05D008256 3.1e-06 55.8 144 34.0
Atru.chr1.3517 Acer truncatum HOM05D006831 ORTHO05D008256 5.2e-06 55.1 105 34.3
ClCG00G002730 Citrullus lanatus HOM05D006831 ORTHO05D008256 5.2e-06 55.1 136 31.6
ClCG07G013280 Citrullus lanatus HOM05D006831 ORTHO05D008256 5.2e-06 55.1 136 31.6
Thecc.06G098700 Theobroma cacao HOM05D006831 ORTHO05D008256 6.8e-06 54.7 102 37.3
Nitab4.5_0012387g0010 Nicotiana tabacum HOM05D006831 ORTHO05D008256 8.9e-06 54.3 105 29.5


User provided reference genes

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