Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 1.3e-137 493.8 426 100.0
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 9.4e-43 178.7 139 62.6
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.4e-38 164.1 137 61.3
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.4e-38 164.1 137 61.3
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.7e-36 157.9 136 59.6
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 4.7e-34 149.8 136 52.2
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.4e-33 148.3 136 51.5
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 6.7e-33 146.0 137 54.7
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.0e-32 144.4 128 58.6
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 1.1e-27 128.6 133 46.6
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 1.9e-27 127.9 135 46.7
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 4.2e-27 126.7 114 56.1
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 5.5e-27 126.3 137 46.7
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 2.3e-25 120.9 137 44.5
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 3.0e-25 120.6 131 47.3
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 3.9e-25 120.2 133 45.1
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 4.4e-24 116.7 133 43.6
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 7.4e-24 115.9 136 44.1
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 3.7e-23 113.6 142 40.1
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 6.3e-23 112.8 134 46.3
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 8.2e-23 112.5 133 41.4
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 3.1e-22 110.5 132 41.7
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 5.3e-22 109.8 131 42.0
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 5.9e-21 106.3 131 41.2
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 1.5e-19 101.7 136 41.2
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.5e-19 101.7 134 43.3
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 2.5e-19 100.9 132 38.6
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 1.2e-18 98.6 132 38.6
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 8.0e-18 95.9 130 37.7
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.0e-17 95.5 139 38.8
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 1.8e-17 94.7 127 41.7
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 8.8e-17 92.4 133 36.8
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 1.2e-16 92.0 133 35.3
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 1.2e-16 92.0 133 36.8
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 2.0e-16 91.3 134 39.6
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 7.5e-16 89.4 139 34.5
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 2.2e-15 87.8 132 34.8
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 2.2e-15 87.8 136 36.0
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 2.2e-15 87.8 87 49.4
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.1e-14 85.5 137 35.0
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 1.1e-14 85.5 110 41.8
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 9.1e-14 82.4 133 35.3
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 2.0e-13 81.3 90 45.6
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 2.7e-13 80.9 133 33.8
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 2.7e-13 80.9 102 39.2
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 5.9e-13 79.7 67 55.2
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 1.7e-12 78.2 134 35.8
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 2.9e-12 77.4 67 55.2
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 2.9e-12 77.4 66 54.5
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 5.0e-12 76.6 132 31.1
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 2.5e-11 74.3 123 35.8
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 4.2e-11 73.6 134 33.6
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.0e-09 68.9 132 29.5
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.4e-09 68.6 129 31.0
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 3.4e-08 63.9 67 41.8
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.4e-08 63.9 67 41.8
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.7e-07 60.5 67 40.3
Gohir.D02G212500 Gossypium hirsutum HOM05D006858 ORTHO05D008767 8.3e-07 59.3 128 28.1
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.1e-06 58.9 67 40.3
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.1e-06 58.9 63 42.9
Gohir.A03G191600 Gossypium hirsutum HOM05D006858 ORTHO05D008767 1.4e-06 58.5 128 28.1
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 3.1e-06 57.4 132 25.8
SalBow2G1354 Salvia bowleyana HOM05D000162 ORTHO05D000090 3.1e-06 57.4 118 30.5
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 4.1e-06 57.0 140 26.4
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 5.4e-06 56.6 140 26.4
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 5.4e-06 56.6 60 41.7
vmacro00255 Vaccinium macrocarpon HOM05D007402 ORTHO05D003673 5.4e-06 56.6 141 30.5
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 7.0e-06 56.2 140 26.4
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 9.1e-06 55.8 140 26.4
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 9.1e-06 55.8 140 26.4
SalBow3G1046 Salvia bowleyana HOM05D000162 ORTHO05D000090 9.1e-06 55.8 117 26.5
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 9.1e-06 55.8 138 23.9
Thecc.02G097300 Theobroma cacao HOM05D006858 ORTHO05D008767 9.1e-06 55.8 125 28.0


User provided reference genes

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