Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 9.6e-195 683.3 348 100.0
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 8.9e-84 314.7 361 51.8
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 9.9e-67 258.1 371 46.6
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 7.1e-65 251.9 357 45.9
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 1.0e-47 194.9 205 49.3
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 3.9e-47 193.0 231 45.0
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.9e-46 190.7 359 37.0
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 2.5e-46 190.3 337 38.6
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 5.7e-46 189.1 236 45.8
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 4.8e-45 186.0 355 34.6
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 1.4e-44 184.5 249 43.8
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 3.1e-44 183.3 205 48.3
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 3.8e-42 176.4 255 42.4
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 2.7e-40 170.2 356 36.8
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.0e-39 166.8 232 41.8
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 3.7e-37 159.8 360 36.7
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 6.3e-37 159.1 251 38.6
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 2.6e-35 153.7 137 55.5
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.8e-34 149.8 217 38.7
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 5.0e-34 149.4 368 31.2
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 4.2e-33 146.4 274 36.9
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 4.6e-32 142.9 253 36.4
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 3.0e-31 140.2 362 32.9
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 3.0e-31 140.2 273 35.5
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 1.5e-30 137.9 306 32.0
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 7.4e-30 135.6 233 37.3
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 7.4e-30 135.6 354 29.9
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.3e-29 134.8 233 37.3
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.7e-29 134.4 232 38.8
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.8e-29 133.7 365 31.0
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 2.8e-29 133.7 246 37.0
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 3.7e-29 133.3 219 38.8
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 3.7e-29 133.3 355 31.5
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 6.3e-29 132.5 264 34.1
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.1e-28 130.2 305 32.5
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 4.1e-28 129.8 204 35.8
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 4.1e-28 129.8 310 32.9
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 4.1e-28 129.8 286 33.2
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 6.9e-28 129.0 327 32.4
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 1.2e-27 128.3 240 34.6
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.2e-27 128.3 397 30.5
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 2.6e-27 127.1 189 39.7
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.4e-27 126.7 264 32.2
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.4e-27 126.7 264 32.2
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.4e-27 126.7 264 32.2
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 5.9e-27 125.9 323 34.4
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 7.7e-27 125.6 165 41.2
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.3e-26 124.8 266 33.5
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 1.3e-26 124.8 365 31.8
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 1.7e-26 124.4 187 42.2
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 1.7e-26 124.4 126 50.0
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.7e-26 124.4 312 30.1
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 2.2e-26 124.0 312 30.8
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 2.2e-26 124.0 347 32.9
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 2.2e-26 124.0 263 32.7
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.8e-26 123.2 196 37.8
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 6.5e-26 122.5 207 35.3
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 6.5e-26 122.5 199 33.2
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 8.5e-26 122.1 330 32.1
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 8.5e-26 122.1 212 34.4
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-25 121.7 259 32.0
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 1.1e-25 121.7 191 39.3
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 2.5e-25 120.6 98 60.2
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 5.5e-25 119.4 97 60.8
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 5.5e-25 119.4 262 29.4
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 7.2e-25 119.0 169 43.2
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 1.2e-24 118.2 414 24.4
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.6e-24 117.9 211 35.1
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 1.6e-24 117.9 321 31.5
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.7e-24 117.1 182 38.5
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.7e-24 116.3 237 32.5
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 6.1e-24 115.9 191 37.7
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 7.9e-24 115.5 182 37.4
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 7.9e-24 115.5 251 33.1
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 1.0e-23 115.2 388 29.4
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.0e-23 115.2 165 39.4
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 1.0e-23 115.2 254 32.3
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 1.0e-23 115.2 356 30.3
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 1.8e-23 114.4 315 29.5
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 2.3e-23 114.0 370 29.5
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 5.2e-23 112.8 198 36.4
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 5.2e-23 112.8 387 27.9
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 5.2e-23 112.8 141 45.4
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 6.7e-23 112.5 185 37.8
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 6.7e-23 112.5 357 28.9
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 8.8e-23 112.1 222 32.9
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 8.8e-23 112.1 207 35.3
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 3.3e-22 110.2 171 39.2
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 3.3e-22 110.2 259 32.8
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 4.4e-22 109.8 234 33.3
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 5.7e-22 109.4 201 34.3
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 1.3e-21 108.2 177 33.9
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 2.2e-21 107.5 177 34.5
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 2.2e-21 107.5 203 33.0
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.8e-21 107.1 239 32.6
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 4.8e-21 106.3 247 32.4
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 4.8e-21 106.3 329 31.9
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 6.3e-21 105.9 344 32.0
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 8.2e-21 105.5 290 30.7
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 8.2e-21 105.5 194 33.5
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 1.1e-20 105.1 118 47.5
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 2.4e-20 104.0 374 28.3
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 2.4e-20 104.0 161 39.1
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 2.4e-20 104.0 173 34.7
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 3.1e-20 103.6 238 31.1
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 5.3e-20 102.8 342 26.9
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 7.0e-20 102.4 194 34.5
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 7.0e-20 102.4 194 33.0
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 9.1e-20 102.1 310 29.7
Oeu057996.1 Olea europaea HOM05D003589 ORTHO05D005170 9.1e-20 102.1 205 37.6
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 9.1e-20 102.1 374 28.1
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 1.2e-19 101.7 168 36.3
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 1.2e-19 101.7 234 32.9
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 1.6e-19 101.3 324 32.4
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 2.0e-19 100.9 290 29.3
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 2.0e-19 100.9 218 30.3
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 2.0e-19 100.9 218 31.7
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 2.6e-19 100.5 308 28.9
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 2.6e-19 100.5 200 31.0
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.5e-19 100.1 195 30.8
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 4.5e-19 99.8 187 31.0
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 7.7e-19 99.0 197 36.5
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.0e-18 98.6 195 29.2
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 1.7e-18 97.8 295 29.5
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 1.7e-18 97.8 302 28.5
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 3.8e-18 96.7 155 38.1
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 6.5e-18 95.9 273 28.9
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 8.5e-18 95.5 351 29.1
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 1.9e-17 94.4 329 26.4
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 7.2e-17 92.4 182 31.9
BraA03t13942Z Brassica rapa HOM05D003589 ORTHO05D005170 1.2e-16 91.7 237 30.8
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 1.6e-16 91.3 275 28.4
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 3.6e-16 90.1 216 31.5
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 8.0e-16 89.0 333 29.1
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 1.0e-15 88.6 239 26.4
BolC7t45155H Brassica oleracea HOM05D003589 ORTHO05D005170 3.0e-15 87.0 292 28.4
Zm00001eb352040 Zea mays HOM05D003589 ORTHO05D005170 6.7e-15 85.9 229 26.6
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 8.8e-15 85.5 188 29.3
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 1.5e-14 84.7 375 25.3
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 2.0e-14 84.3 215 28.8
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 2.6e-14 84.0 303 24.8
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 3.3e-14 83.6 189 28.6
Pp3c1_25250 Physcomitrium patens HOM05D029953 ORTHO05D005170 4.4e-14 83.2 220 27.7
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 7.5e-14 82.4 354 28.0
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 6.3e-13 79.3 180 28.9
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 6.3e-13 79.3 217 24.4
CDE04G2629 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 8.2e-13 79.0 323 28.5
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 8.2e-13 79.0 213 27.7
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 1.8e-12 77.8 251 22.7
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 4.1e-12 76.6 166 32.5
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 9.1e-12 75.5 151 31.8
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 4.5e-11 73.2 214 24.8
Zm00001eb290650 Zea mays HOM05D003589 ORTHO05D005170 2.2e-10 70.9 212 24.5
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 2.9e-10 70.5 150 31.3
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 2.9e-10 70.5 317 24.0
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 5.0e-10 69.7 280 27.9
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 6.5e-10 69.3 107 37.4
CDE04G3060 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 1.5e-09 68.2 326 27.9
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.9e-09 67.8 188 25.5
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 3.2e-09 67.0 196 24.5
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 5.5e-09 66.2 213 23.0
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 5.5e-09 66.2 231 23.4
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 5.5e-09 66.2 396 24.2
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 7.2e-09 65.9 184 24.5
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 6.1e-08 62.8 184 23.9
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 8.0e-08 62.4 214 23.4
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.0e-07 62.0 242 21.9
Mapoly0014s0172 Marchantia polymorpha HOM05D029953 ORTHO05D009567 1.4e-07 61.6 259 26.6
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 3.0e-07 60.5 324 23.1
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 8.8e-07 58.9 108 30.6
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 5.7e-06 56.2 346 22.0


User provided reference genes

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