Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 5.8e-231 803.9 414 100.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 2.1e-87 327.0 423 48.9
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.0e-66 257.3 415 45.5
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 7.9e-63 245.4 266 53.0
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 6.7e-62 242.3 289 50.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 4.3e-61 239.6 346 45.7
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 6.3e-60 235.7 404 40.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 8.2e-60 235.3 286 51.0
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 8.2e-60 235.3 314 46.5
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.1e-59 235.0 326 45.4
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.8e-59 234.2 279 51.6
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 3.1e-59 233.4 272 51.8
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 6.9e-59 232.3 266 51.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 9.1e-59 231.9 361 43.8
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.5e-58 231.1 313 48.6
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 2.0e-58 230.7 297 48.8
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 3.4e-58 229.9 317 47.0
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 4.5e-58 229.6 327 45.6
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 5.9e-58 229.2 312 45.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 5.9e-58 229.2 424 40.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.9e-58 229.2 280 48.9
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 5.9e-58 229.2 326 43.3
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.0e-57 228.4 315 47.0
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.0e-57 228.4 335 46.9
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 3.8e-57 226.5 319 47.0
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.8e-57 226.5 322 46.6
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 3.8e-57 226.5 263 50.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 3.8e-57 226.5 344 43.3
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 3.8e-57 226.5 327 43.4
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.0e-57 226.1 322 46.6
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 5.0e-57 226.1 351 43.6
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.5e-57 225.7 322 46.6
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.5e-57 225.7 431 39.4
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 8.5e-57 225.3 264 50.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 8.5e-57 225.3 262 51.5
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.1e-56 224.9 436 40.6
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.9e-56 224.2 268 51.5
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.9e-56 224.2 263 51.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.5e-56 223.8 411 39.2
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.5e-56 223.8 315 46.7
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 3.2e-56 223.4 322 45.7
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 3.2e-56 223.4 266 53.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 9.4e-56 221.9 322 45.7
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.2e-55 221.5 259 51.4
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.2e-55 221.5 332 44.9
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.6e-55 221.1 261 50.2
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 2.1e-55 220.7 264 49.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.7e-55 220.3 424 39.9
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.6e-55 219.9 294 48.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.6e-55 219.5 354 44.1
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.9e-55 218.8 421 39.7
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.8e-54 217.6 282 49.3
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.8e-54 217.6 397 40.3
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 2.3e-54 217.2 272 51.5
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.3e-54 217.2 330 45.5
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 3.0e-54 216.9 388 42.0
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 5.1e-54 216.1 262 48.5
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 5.1e-54 216.1 303 44.6
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 5.1e-54 216.1 407 38.6
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.7e-54 215.7 320 45.3
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.8e-54 215.3 299 45.8
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 8.8e-54 215.3 326 45.4
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-53 214.9 262 48.9
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.6e-53 213.8 264 47.7
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.6e-53 213.8 299 45.5
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.3e-53 213.4 299 45.2
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 4.4e-53 213.0 319 44.5
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 5.7e-53 212.6 260 47.3
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.3e-52 209.1 320 43.8
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.4e-51 208.0 300 45.7
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 6.9e-51 205.7 208 56.2
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 9.1e-51 205.3 265 49.1
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 9.1e-51 205.3 347 40.1
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 7.7e-50 202.2 312 44.2
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.0e-49 201.8 363 39.9
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.0e-49 201.8 273 45.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.4e-48 198.0 208 53.8
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.4e-48 198.0 208 53.8
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.4e-48 198.0 340 40.0
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 3.2e-48 196.8 322 43.2
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 5.5e-48 196.1 240 53.3
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.2e-47 194.9 221 53.4
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.6e-47 194.5 208 52.9
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 3.6e-47 193.4 211 54.0
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 4.7e-47 193.0 280 44.3
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.0e-46 191.8 237 48.5
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.0e-46 191.8 208 52.4
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.4e-46 191.4 328 39.9
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.9e-46 189.9 328 39.6
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 8.8e-46 188.7 252 47.2
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-45 188.3 262 45.0
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.5e-45 188.0 184 59.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 3.3e-45 186.8 237 48.5
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.7e-44 184.5 262 43.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 7.7e-42 175.6 232 47.8
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.2e-41 174.1 197 52.3
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.9e-41 173.7 374 34.5
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.0e-38 165.2 169 55.6
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 9.7e-37 158.7 187 51.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.3e-36 158.3 247 44.1
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.7e-36 157.9 214 47.2
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.7e-33 147.9 156 56.4
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.5e-32 144.8 271 40.2
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 2.2e-28 131.0 202 43.1
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.5e-26 123.6 191 40.8
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.7e-25 121.3 230 33.5
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 3.6e-23 113.6 199 40.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 6.3e-20 102.8 136 44.9
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.0e-19 99.4 131 45.0
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.0e-17 95.5 208 34.6
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.3e-17 95.1 207 34.3
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 6.6e-17 92.8 143 37.8
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 1.0e-14 85.5 146 39.0
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.7e-12 78.2 69 60.9
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 6.4e-12 76.3 56 73.2
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 9.2e-11 72.4 205 26.8
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 1.8e-06 58.2 56 55.4
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.2e-06 56.6 52 61.5


User provided reference genes

Program Settings