Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 4.0e-192 675.2 505 100.0
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 3.0e-46 190.7 256 45.7
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 3.7e-44 183.7 317 41.0
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 1.0e-33 149.1 268 41.4
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 1.5e-32 145.2 260 41.2
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 2.1e-31 141.4 257 40.1
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 2.1e-31 141.4 259 36.7
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 2.7e-31 141.0 255 39.2
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 6.8e-30 136.3 258 41.1
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.5e-29 135.2 261 38.7
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 3.4e-29 134.0 258 39.5
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 4.4e-29 133.7 267 37.5
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.7e-28 131.7 259 39.4
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.2e-28 131.3 273 35.9
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 2.8e-28 131.0 257 37.7
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 2.8e-28 131.0 258 39.5
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 4.8e-28 130.2 255 38.0
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 8.3e-28 129.4 257 35.8
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 1.4e-27 128.6 262 38.2
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 4.1e-27 127.1 266 39.1
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 7.0e-27 126.3 254 39.4
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 7.0e-27 126.3 242 38.8
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.0e-27 126.3 262 36.3
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 9.1e-27 125.9 268 36.6
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 1.2e-26 125.6 227 41.9
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.6e-26 125.2 256 35.9
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.6e-26 125.2 255 32.5
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.5e-26 124.0 264 36.4
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.5e-26 124.0 253 36.0
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 4.5e-26 123.6 257 37.7
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 5.9e-26 123.2 271 36.9
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 2.3e-25 121.3 260 35.8
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 2.3e-25 121.3 255 37.3
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.3e-25 121.3 251 37.8
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 2.5e-24 117.9 246 36.2
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 3.3e-24 117.5 245 37.1
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 4.2e-24 117.1 268 35.8
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 4.2e-24 117.1 254 34.3
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 1.6e-23 115.2 269 33.5
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 1.6e-23 115.2 253 36.4
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 2.8e-23 114.4 236 36.9
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 3.6e-23 114.0 253 36.4
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 3.6e-23 114.0 252 35.3
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 4.7e-23 113.6 225 37.3
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.0e-22 112.5 257 31.9
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.4e-22 112.1 265 34.3
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.8e-22 111.7 265 34.3
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 3.0e-22 110.9 254 33.1
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 4.0e-22 110.5 251 35.5
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 5.2e-22 110.2 256 37.1
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 8.9e-22 109.4 259 37.8
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 2.0e-21 108.2 249 32.9
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 2.0e-21 108.2 249 32.9
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.0e-21 108.2 238 34.0
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 2.6e-21 107.8 253 33.2
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 2.6e-21 107.8 251 33.9
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 4.4e-21 107.1 236 34.3
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 7.5e-21 106.3 267 32.6
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 1.7e-20 105.1 235 35.3
SGA_v2.0_scaffold3G01725 Striga asiatica HOM05D006830 ORTHO05D008119 3.7e-20 104.0 84 77.4
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.1e-19 102.4 234 34.6
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.4e-19 102.1 259 30.9
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.4e-19 102.1 306 31.0
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.8e-19 101.7 255 32.5
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 1.8e-19 101.7 255 33.7
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 7.0e-19 99.8 278 33.1
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 7.0e-19 99.8 272 32.7
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 1.2e-18 99.0 262 32.8
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 3.5e-18 97.4 193 36.8
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 5.9e-18 96.7 243 31.7
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 5.9e-18 96.7 263 33.8
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.0e-17 95.9 256 31.6
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.3e-17 95.5 231 32.9
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 5.0e-17 93.6 200 37.0
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 5.0e-17 93.6 217 35.5
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 6.6e-17 93.2 254 32.7
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.9e-16 91.7 209 37.3
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 4.3e-16 90.5 259 31.3
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 2.1e-15 88.2 214 33.2
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 2.1e-15 88.2 216 33.8
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 2.8e-15 87.8 224 36.2
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 6.1e-15 86.7 249 30.5
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 2.3e-14 84.7 219 35.2
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 2.3e-14 84.7 283 29.7
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 2.3e-14 84.7 256 31.6
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 6.8e-14 83.2 193 32.6
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.2e-13 82.4 253 32.0
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 1.5e-13 82.0 203 33.0
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 2.0e-13 81.6 213 33.3
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 3.4e-13 80.9 123 44.7
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 2.2e-12 78.2 195 33.3
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 2.2e-12 78.2 191 33.5
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 3.7e-12 77.4 263 30.8
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 6.4e-12 76.6 200 33.0
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 1.1e-11 75.9 169 33.7
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 5.4e-11 73.6 254 30.3
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.3e-09 68.9 183 30.1
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 6.6e-09 66.6 57 61.4
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 6.6e-09 66.6 57 61.4
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.5e-08 65.5 83 49.4
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 4.3e-08 63.9 129 37.2
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 5.6e-08 63.5 191 31.4
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 6.2e-07 60.1 61 59.0
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 1.1e-06 59.3 62 51.6
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 4.0e-06 57.4 74 50.0
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 6.8e-06 56.6 96 41.7


User provided reference genes

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