Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold83G26375 Striga asiatica HOM05D003826 ORTHO05D004479 1.0e-75 286.6 136 100.0
Oeu042406.1 Olea europaea HOM05D003826 ORTHO05D004479 9.5e-66 253.4 134 88.1
Migut.B00552 Erythranthe guttata HOM05D003826 ORTHO05D004479 3.6e-65 251.5 134 83.6
MSTRG.20281 Avicennia marina HOM05D003826 ORTHO05D004479 5.2e-64 247.7 134 84.3
Hma1.2p1_0908F.1_g235485 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 7.6e-63 243.8 134 85.8
Nitab4.5_0002017g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 2.2e-62 242.3 134 82.8
Rhsim05G0101900 Rhododendron simsii HOM05D003826 ORTHO05D004479 2.2e-62 242.3 134 83.6
GSVIVG01015652001 Vitis vinifera HOM05D003826 ORTHO05D004479 2.9e-62 241.9 134 81.3
Nitab4.5_0008998g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 8.4e-62 240.4 134 82.1
vmacro19957 Vaccinium macrocarpon HOM05D003826 ORTHO05D004479 8.4e-62 240.4 134 82.8
Cc02_g20920 Coffea canephora HOM05D003826 ORTHO05D004479 1.1e-61 240.0 134 81.3
ECA236G1467 Erigeron canadensis HOM05D003826 ORTHO05D000778 1.4e-61 239.6 134 81.3
Actinidia28031 Actinidia chinensis HOM05D003826 ORTHO05D004479 1.9e-61 239.2 134 83.6
EL10Ac9g22073 Beta vulgaris HOM05D003826 ORTHO05D004479 7.1e-61 237.3 134 79.9
Sc18g0007060 Simmondsia chinensis HOM05D003826 ORTHO05D004479 7.1e-61 237.3 134 79.1
Nn1g05569 Nelumbo nucifera HOM05D003826 ORTHO05D004479 9.2e-61 236.9 134 78.4
CAN.G997.2 Capsicum annuum HOM05D003826 ORTHO05D004479 1.6e-60 236.1 134 79.1
Solyc01g105970.3 Solanum lycopersicum HOM05D003826 ORTHO05D004479 1.6e-60 236.1 134 80.6
Sopen01g048350 Solanum pennellii HOM05D003826 ORTHO05D004479 1.6e-60 236.1 134 80.6
PGSC0003DMG400033580 Solanum tuberosum HOM05D003826 ORTHO05D004479 1.6e-60 236.1 134 80.6
TAR628G1674 Trochodendron aralioides HOM05D003826 ORTHO05D004479 1.6e-60 236.1 134 79.1
ClCG09G016080 Citrullus lanatus HOM05D003826 ORTHO05D004479 2.1e-60 235.7 134 79.1
MBI16_g12461_MAGBIO Magnolia biondii HOM05D003826 ORTHO05D004479 2.7e-60 235.3 135 80.7
unitig_37.g12793 Utricularia gibba HOM05D003826 ORTHO05D004479 2.7e-60 235.3 134 79.9
Prupe.8G069800 Prunus persica HOM05D003826 ORTHO05D004479 4.6e-60 234.6 134 79.1
Nitab4.5_0011038g0020 Nicotiana tabacum HOM05D003826 ORTHO05D004479 6.0e-60 234.2 135 78.5
Atru.chr6.1261 Acer truncatum HOM05D003826 ORTHO05D004479 7.8e-60 233.8 134 77.6
Cfa005734 Carpinus fangiana HOM05D003826 ORTHO05D004479 7.8e-60 233.8 134 79.9
HanXRQChr08g0227191 Helianthus annuus HOM05D003826 ORTHO05D004479 7.8e-60 233.8 134 79.1
PGR042G0672 Punica granatum HOM05D003826 ORTHO05D004479 7.8e-60 233.8 134 78.4
FvH4_2g11710 Fragaria vesca HOM05D003826 ORTHO05D004479 1.0e-59 233.4 134 79.1
FAN24G2578 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.0e-59 233.4 134 79.1
Manes.07G038200 Manihot esculenta HOM05D003826 ORTHO05D004479 1.0e-59 233.4 134 78.4
PGSC0003DMG400031403 Solanum tuberosum HOM05D003826 ORTHO05D004479 1.7e-59 232.6 134 79.1
Atru.chr6.1269 Acer truncatum HOM05D003826 ORTHO05D004479 2.3e-59 232.3 134 76.9
MSTRG.27816 Avicennia marina HOM05D003826 ORTHO05D004479 3.0e-59 231.9 134 80.6
Ciclev10029337m.g Citrus clementina HOM05D003826 ORTHO05D004479 3.9e-59 231.5 134 76.9
MD05G1047400 Malus domestica HOM05D003826 ORTHO05D004479 3.9e-59 231.5 134 76.1
Gohir.A13G050900 Gossypium hirsutum HOM05D003826 ORTHO05D004479 5.1e-59 231.1 134 78.4
unitig_46.g18833 Utricularia gibba HOM05D003826 ORTHO05D004479 8.7e-59 230.3 134 79.9
Gorai.013G055500 Gossypium raimondii HOM05D003826 ORTHO05D004479 1.5e-58 229.6 134 77.6
Peaxi162Scf00003g03230 Petunia axillaris HOM05D003826 ORTHO05D004479 1.5e-58 229.6 134 79.9
Thecc.02G129300 Theobroma cacao HOM05D003826 ORTHO05D004479 1.5e-58 229.6 134 79.1
CSS0016886 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 2.5e-58 228.8 134 78.4
CSS0036052 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 2.5e-58 228.8 134 78.4
Duzib052G0856 Durio zibethinus HOM05D003826 ORTHO05D004479 2.5e-58 228.8 134 78.4
CiPaw.05G029600 Carya illinoinensis HOM05D003826 ORTHO05D004479 3.3e-58 228.4 134 76.9
Haze_10523 Corylus avellana HOM05D003826 ORTHO05D004479 3.3e-58 228.4 134 77.6
Os03g0737400 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 4.3e-58 228.0 134 77.6
CsaV3_7G006880 Cucumis sativus L. HOM05D003826 ORTHO05D004479 9.6e-58 226.9 134 76.1
Dinv24149 Davidia involucrata HOM05D003826 ORTHO05D004479 9.6e-58 226.9 129 82.2
Eucgr.G00988 Eucalyptus grandis HOM05D003826 ORTHO05D004479 9.6e-58 226.9 134 76.1
Manes.10G098600 Manihot esculenta HOM05D003826 ORTHO05D004479 9.6e-58 226.9 134 76.9
TAR376G0575 Trochodendron aralioides HOM05D003826 ORTHO05D004479 9.6e-58 226.9 134 77.6
Potri.017G043900 Populus trichocarpa HOM05D003826 ORTHO05D004479 1.2e-57 226.5 134 76.1
Sed0006788 Sechium edule HOM05D003826 ORTHO05D004479 1.6e-57 226.1 134 76.1
Aa31LG8G12520 Aethionema arabicum HOM05D003826 ORTHO05D004479 2.8e-57 225.3 134 75.4
Zm00001eb215290 Zea mays HOM05D003826 ORTHO05D004479 8.1e-57 223.8 134 76.9
Thhalv10022868m.g Eutrema salsugineum HOM05D003826 ORTHO05D004479 1.1e-56 223.4 134 76.1
MELO3C018606.2 Cucumis melo HOM05D003826 ORTHO05D004479 1.4e-56 223.0 136 75.7
CSS0050337 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 2.4e-56 222.2 134 76.9
BolC9t54449H Brassica oleracea HOM05D003826 ORTHO05D004479 4.0e-56 221.5 134 73.9
RcHm_v2.0_Chr6g0271011 Rosa chinensis HOM05D003826 ORTHO05D004479 5.2e-56 221.1 134 75.4
TWI14G0912 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 5.2e-56 221.1 134 73.1
AT2G14110 Arabidopsis thaliana HOM05D003826 ORTHO05D004479 6.9e-56 220.7 134 74.6
AL3G45800 Arabidopsis lyrata HOM05D003826 ORTHO05D004479 9.0e-56 220.3 134 74.6
CARHR104200 Cardamine hirsuta HOM05D003826 ORTHO05D004479 9.0e-56 220.3 134 73.9
Migut.N01096 Erythranthe guttata HOM05D003826 ORTHO05D004479 1.2e-55 219.9 132 77.3
Sp3g27460 Schrenkiella parvula HOM05D003826 ORTHO05D004479 1.2e-55 219.9 134 74.6
Carub.0003s2836 Capsella rubella HOM05D003826 ORTHO05D004479 1.5e-55 219.5 134 73.1
Potri.017G043700 Populus trichocarpa HOM05D003826 ORTHO05D004479 1.5e-55 219.5 134 74.6
THA.LOC104807183 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 1.5e-55 219.5 134 73.1
BcaB02g11486 Brassica carinata HOM05D003826 ORTHO05D004479 2.0e-55 219.2 134 73.9
A09p13020 Brassica napus HOM05D003826 ORTHO05D004479 2.0e-55 219.2 134 72.4
BraA09t36947Z Brassica rapa HOM05D003826 ORTHO05D004479 2.0e-55 219.2 134 72.4
BcaC04g22775 Brassica carinata HOM05D003826 ORTHO05D004479 2.6e-55 218.8 134 72.4
C09p15420 Brassica napus HOM05D003826 ORTHO05D004479 2.6e-55 218.8 134 72.4
Cpa.g.sc20.1 Carica papaya HOM05D003826 ORTHO05D004479 2.6e-55 218.8 134 74.6
TWI59G0852 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 3.4e-55 218.4 134 72.4
PSO541G0595 Papaver somniferum HOM05D003826 ORTHO05D004479 4.4e-55 218.0 135 73.3
Sabra17G0029800 Salix brachista HOM05D003826 ORTHO05D004479 4.4e-55 218.0 134 75.4
Dinv13602 Davidia involucrata HOM05D003826 ORTHO05D004479 1.7e-54 216.1 135 73.3
arahy.Tifrunner.gnm1.ann1.AL483W Arachis hypogaea HOM05D003826 ORTHO05D004479 2.2e-54 215.7 135 73.3
Sed0018824 Sechium edule HOM05D003826 ORTHO05D004479 2.2e-54 215.7 134 72.4
Thecc.01G090400 Theobroma cacao HOM05D003826 ORTHO05D004479 2.2e-54 215.7 133 75.2
Duzib147G0892 Durio zibethinus HOM05D003826 ORTHO05D004479 3.8e-54 214.9 132 74.2
QL11p025207 Quercus lobata HOM05D003826 ORTHO05D004479 3.8e-54 214.9 134 73.9
arahy.Tifrunner.gnm1.ann1.8F9AHD Arachis hypogaea HOM05D003826 ORTHO05D004479 6.4e-54 214.2 135 72.6
VMungo0540G1729 Vigna mungo HOM05D003826 ORTHO05D004479 6.4e-54 214.2 131 73.3
Cpa.g.sc55.25 Carica papaya HOM05D003826 ORTHO05D004479 1.1e-53 213.4 132 74.2
Glyma.13G256700 Glycine max HOM05D003826 ORTHO05D004479 1.9e-53 212.6 131 73.3
Aqoxy6G00874 Aquilegia oxysepala HOM05D003826 ORTHO05D004479 2.4e-53 212.2 131 74.0
CDE04G3107 Ceratophyllum demersum HOM05D003826 ORTHO05D004479 2.4e-53 212.2 134 73.1
Haze_03870 Corylus avellana HOM05D003826 ORTHO05D004479 2.4e-53 212.2 132 72.7
TPR.G9500 Trifolium pratense HOM05D003826 ORTHO05D004479 3.2e-53 211.8 137 73.7
Lj5A230G39 Lonicera japonica HOM05D003826 ORTHO05D004479 7.1e-53 210.7 121 80.2
Lalb_Chr16g0382941 Lupinus albus HOM05D003826 ORTHO05D004479 7.1e-53 210.7 129 73.6
Phvul.002G212900 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 1.2e-52 209.9 131 70.2
Lalb_Chr05g0216361 Lupinus albus HOM05D003826 ORTHO05D004479 1.6e-52 209.5 132 73.5
Lj4g0024713 Lotus japonicus HOM05D003826 ORTHO05D004479 2.7e-52 208.8 131 71.0
Cfa006882 Carpinus fangiana HOM05D003826 ORTHO05D004479 3.5e-52 208.4 132 72.0
Lj6g0003535 Lotus japonicus HOM05D003826 ORTHO05D004479 6.0e-52 207.6 131 71.8
DCAR_003601 Daucus carota HOM05D003826 ORTHO05D004479 7.8e-52 207.2 133 73.7
SEGI_37389 Sequoiadendron giganteum HOM05D003826 ORTHO05D004479 7.8e-52 207.2 133 68.4
Gohir.D12G017100 Gossypium hirsutum HOM05D003826 ORTHO05D004479 3.0e-51 205.3 134 71.6
Phvul.006G202000 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 3.0e-51 205.3 131 71.0
CANSAT54G1150 Cannabis sativa HOM05D003826 ORTHO05D004479 3.9e-51 204.9 129 72.9
Gorai.008G017400 Gossypium raimondii HOM05D003826 ORTHO05D004479 3.9e-51 204.9 132 73.5
Lsat_1_v5_gn_7_82781 Lactuca sativa HOM05D003826 ORTHO05D004479 3.9e-51 204.9 134 73.9
Medtr2g009600 Medicago truncatula HOM05D003826 ORTHO05D004479 3.9e-51 204.9 131 70.2
PGR102G1409 Punica granatum HOM05D003826 ORTHO05D004479 3.9e-51 204.9 131 71.8
arahy.Tifrunner.gnm1.ann1.JLXM4S Arachis hypogaea HOM05D003826 ORTHO05D004479 5.1e-51 204.5 126 75.4
arahy.Tifrunner.gnm1.ann1.QQ8XF2 Arachis hypogaea HOM05D003826 ORTHO05D004479 5.1e-51 204.5 126 75.4
Hma1.2p1_1058F.1_g252870 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 6.6e-51 204.1 132 70.5
Psat1g214120 Pisum sativum HOM05D003826 ORTHO05D004479 1.1e-50 203.4 131 71.0
Atru.chr3.1247 Acer truncatum HOM05D003826 ORTHO05D004479 3.3e-50 201.8 131 69.5
CiPaw.07G047500 Carya illinoinensis HOM05D003826 ORTHO05D004479 3.3e-50 201.8 132 70.5
Cc07_g14100 Coffea canephora HOM05D003826 ORTHO05D004479 4.3e-50 201.4 132 69.7
Glyma.07G181900 Glycine max HOM05D003826 ORTHO05D004479 5.6e-50 201.1 128 68.8
Medtr4g093560 Medicago truncatula HOM05D003826 ORTHO05D004479 5.6e-50 201.1 131 68.7
Prupe.6G201600 Prunus persica HOM05D003826 ORTHO05D004479 5.6e-50 201.1 132 69.7
Ca_00163_v3 Cicer arietinum L. HOM05D003826 ORTHO05D004479 1.6e-49 199.5 131 71.8
Manes.12G126200 Manihot esculenta HOM05D003826 ORTHO05D004479 1.6e-49 199.5 130 74.6
HPP92_016899 Vanilla planifolia HOM05D003826 ORTHO05D004479 2.1e-49 199.1 134 67.2
Ah.03g139970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 3.6e-49 198.4 133 69.9
MD01G1039300 Malus domestica HOM05D003826 ORTHO05D004479 3.6e-49 198.4 132 68.9
Os03g0737300 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 3.6e-49 198.4 134 67.9
Psat7g101120 Pisum sativum HOM05D003826 ORTHO05D004479 1.1e-48 196.8 131 67.2
arahy.Tifrunner.gnm1.ann1.8NDV1J Arachis hypogaea HOM05D003826 ORTHO05D004479 4.0e-48 194.9 131 66.4
COL.COLO4_32389 Corchorus olitorius HOM05D003826 ORTHO05D004479 2.6e-47 192.2 134 68.7
TPR.G2887 Trifolium pratense HOM05D003826 ORTHO05D004479 5.8e-47 191.0 131 64.1
arahy.Tifrunner.gnm1.ann1.MWC9N2 Arachis hypogaea HOM05D001561 ORTHO05D001715 4.9e-46 188.0 131 65.6
SMO271G0099 Selaginella moellendorffii HOM05D003826 ORTHO05D004479 6.4e-46 187.6 131 61.1
AagrBONN_evm.TU.Sc2ySwM_362.1195 Anthoceros agrestis HOM05D003826 ORTHO05D004479 9.3e-45 183.7 134 59.7
Mapoly0042s0019 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.6e-44 183.0 129 63.6
SalBow8G4107 Salvia bowleyana HOM05D003826 ORTHO05D004479 2.7e-44 182.2 94 91.5
FAN23G0964 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.3e-43 179.1 133 64.7
Pp3c1_28610 Physcomitrium patens HOM05D003826 ORTHO05D004479 6.7e-43 177.6 132 59.1
FvH4_1g19640 Fragaria vesca HOM05D003826 ORTHO05D004479 1.9e-42 176.0 133 63.9
FAN19G1458 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.9e-42 176.0 133 63.9
FAN28G0881 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.5e-42 175.6 133 63.9
AUR62003663 Chenopodium quinoa HOM05D003826 ORTHO05D004479 5.6e-42 174.5 129 62.8
FAN26G3235 Fragaria x ananassa HOM05D003826 ORTHO05D004479 7.4e-42 174.1 133 63.2
Peaxi162Scf00299g00634 Petunia axillaris HOM05D003826 ORTHO05D004479 9.6e-42 173.7 134 62.7
Nitab4.5_0002095g0060 Nicotiana tabacum HOM05D003826 ORTHO05D004479 2.8e-41 172.2 100 77.0
RcHm_v2.0_Chr2g0111211 Rosa chinensis HOM05D003826 ORTHO05D004479 4.8e-41 171.4 134 65.7
Mapoly0032s0046 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.1e-40 170.2 132 58.3
CANSAT01G0714 Cannabis sativa HOM05D003826 ORTHO05D004479 1.8e-40 169.5 135 59.3
Ah.01g023970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 1.5e-39 166.4 94 76.6
Lj5A230G40 Lonicera japonica HOM05D003826 ORTHO05D004479 3.4e-39 165.2 132 61.4
GSVIVG01015646001 Vitis vinifera HOM05D003826 ORTHO05D004479 1.1e-37 160.2 113 70.8
AUR62012887 Chenopodium quinoa HOM05D003826 ORTHO05D004479 1.4e-37 159.8 94 75.5
SalBow6G1284 Salvia bowleyana HOM05D003826 ORTHO05D004479 1.9e-37 159.5 89 79.8
Hund00378 Selenicereus undatus HOM05D003826 ORTHO05D004479 4.2e-37 158.3 89 80.9
AUR62027111 Chenopodium quinoa HOM05D003826 ORTHO05D004479 5.5e-37 157.9 94 74.5
GSVIVG01015647001 Vitis vinifera HOM05D003826 ORTHO05D004479 7.1e-37 157.5 100 77.0
CBR_g26273 Chara braunii HOM05D003826 ORTHO05D004479 1.0e-35 153.7 115 60.0
Os11g0434000 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 1.0e-35 153.7 129 58.1
RhsimUnG0154900 Rhododendron simsii HOM05D003826 ORTHO05D004479 1.3e-35 153.3 95 75.8
ATR0767G074 Amborella trichopoda HOM05D003826 ORTHO05D004479 1.5e-34 149.8 89 78.7
VMungo0251G2759 Vigna mungo HOM05D003826 ORTHO05D004479 3.3e-34 148.7 91 73.6
Nn5g29884 Nelumbo nucifera HOM05D003826 ORTHO05D004479 3.7e-33 145.2 89 74.2
ATR0767G082 Amborella trichopoda HOM05D003826 ORTHO05D004479 6.2e-33 144.4 89 75.3
Solyc10g047310.1 Solanum lycopersicum HOM05D003826 ORTHO05D004479 1.8e-32 142.9 94 69.1
Glyma.15G058200 Glycine max HOM05D003826 ORTHO05D004479 2.4e-32 142.5 124 54.8
Hund16529 Selenicereus undatus HOM05D003826 ORTHO05D004479 3.1e-32 142.1 97 67.0
Ciclev10026755m.g Citrus clementina HOM05D003826 ORTHO05D004479 3.4e-31 138.7 93 72.0
Mapoly0010s0051 Marchantia polymorpha HOM05D003826 ORTHO05D004479 4.5e-23 111.7 129 40.3
AUR62017972 Chenopodium quinoa HOM05D003826 ORTHO05D004479 5.9e-23 111.3 69 75.4
Mapoly0042s0017 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.5e-18 96.7 79 58.2
Sopen10g017590 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-14 81.6 68 60.3
MD10G1054300 Malus domestica HOM05D003826 ORTHO05D004479 7.2e-13 77.8 45 71.1
Lalb_Chr18g0060401 Lupinus albus HOM05D003826 ORTHO05D004479 3.3e-10 68.9 135 35.6
Dinv36604 Davidia involucrata HOM05D003826 ORTHO05D004479 4.4e-10 68.6 36 83.3
FAN15G0689 Fragaria x ananassa HOM05D003826 ORTHO05D004479 6.3e-09 64.7 36 77.8
THA.LOC104824951 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 3.1e-08 62.4 43 67.4
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-06 56.2 39 66.7


User provided reference genes

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