Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 2.1e-258 895.2 461 100.0
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 4.6e-136 488.8 380 67.1
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 8.6e-135 484.6 376 67.6
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 2.4e-129 466.5 301 77.1
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 7.3e-126 454.9 302 75.5
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 2.6e-123 446.4 301 73.8
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 4.4e-123 445.7 347 67.1
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 5.8e-123 445.3 305 73.1
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 6.4e-122 441.8 331 66.8
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 8.4e-122 441.4 316 70.6
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.4e-121 440.7 306 71.9
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.4e-121 440.7 310 71.9
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.9e-121 440.3 310 71.3
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 5.4e-121 438.7 383 61.6
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 6.0e-120 435.3 316 71.5
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 7.8e-120 434.9 316 70.3
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 1.7e-119 433.7 301 71.8
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.7e-119 433.7 322 68.3
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.7e-119 433.7 386 61.1
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 2.3e-119 433.3 301 71.8
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 1.1e-118 431.0 323 70.0
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.3e-118 429.5 305 69.5
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 7.3e-118 428.3 316 69.0
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.3e-117 427.6 307 70.4
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 1.6e-117 427.2 318 68.6
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 1.6e-117 427.2 318 67.6
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 4.8e-117 425.6 325 67.4
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 6.2e-117 425.2 308 69.5
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 8.1e-117 424.9 289 74.4
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.8e-116 423.7 303 70.6
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 5.3e-116 422.2 369 62.1
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 5.3e-116 422.2 306 69.9
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 9.0e-116 421.4 352 63.1
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 1.5e-115 420.6 382 57.9
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 1.5e-115 420.6 304 68.4
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 5.8e-115 418.7 322 65.2
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.7e-114 417.2 308 68.8
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 1.7e-114 417.2 308 69.2
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 2.2e-114 416.8 338 64.2
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 3.8e-114 416.0 378 59.5
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 4.9e-114 415.6 305 68.9
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.1e-113 414.5 302 70.2
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.4e-113 414.1 308 68.5
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 1.4e-113 414.1 313 66.8
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 4.2e-113 412.5 299 69.2
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 4.2e-113 412.5 312 67.0
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 5.4e-113 412.1 315 67.9
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 7.1e-113 411.8 341 64.5
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 7.1e-113 411.8 315 67.0
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.6e-112 410.6 301 68.4
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 4.6e-112 409.1 303 69.6
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.0e-111 407.9 311 65.3
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.0e-111 407.9 303 70.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 6.7e-111 405.2 326 64.4
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 1.1e-110 404.4 334 62.9
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 9.6e-110 401.4 315 63.5
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 1.3e-109 401.0 301 67.8
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 1.6e-109 400.6 338 62.1
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 2.1e-109 400.2 308 67.2
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 2.1e-109 400.2 303 67.0
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.8e-109 399.8 315 63.8
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 6.2e-109 398.7 308 66.6
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 8.1e-109 398.3 301 67.8
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 8.1e-109 398.3 301 67.4
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 8.1e-109 398.3 305 64.3
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.4e-108 397.5 384 56.0
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 1.4e-108 397.5 374 57.8
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 4.0e-108 396.0 301 67.8
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 4.0e-108 396.0 289 70.6
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 5.3e-108 395.6 342 59.9
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 5.3e-108 395.6 304 66.1
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.2e-107 394.4 302 66.6
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 5.8e-107 392.1 300 67.0
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 7.6e-107 391.7 380 57.6
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 9.9e-107 391.3 302 67.2
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 8.4e-106 388.3 302 66.6
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 2.4e-105 386.7 302 65.9
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 1.2e-104 384.4 302 66.2
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 1.2e-104 384.4 302 66.2
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.0e-103 381.3 371 57.7
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 1.3e-103 380.9 273 71.8
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 1.3e-103 380.9 338 61.2
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 5.1e-103 379.0 330 62.7
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 3.3e-102 376.3 300 64.0
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 3.7e-101 372.9 299 64.9
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 1.4e-100 370.9 331 61.0
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 3.1e-100 369.8 299 64.2
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 2.6e-99 366.7 276 68.1
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.4e-97 360.9 293 62.1
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 7.9e-96 355.1 283 66.1
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 2.3e-95 353.6 283 62.5
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 8.7e-95 351.7 358 55.0
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.5e-91 340.9 280 63.2
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 4.5e-91 339.3 303 59.4
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 1.0e-90 338.2 302 56.6
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 2.7e-88 330.1 257 66.5
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 2.7e-88 330.1 338 53.6
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 3.7e-85 319.7 304 56.9
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.7e-85 319.7 315 54.9
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 3.9e-79 299.7 222 68.5
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 4.4e-78 296.2 217 67.7
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 2.1e-72 277.3 224 66.1
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 6.7e-71 272.3 325 48.9
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 6.7e-71 272.3 230 66.1
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 2.6e-70 270.4 191 70.2
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 2.6e-67 260.4 212 60.8
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.9e-66 256.9 297 48.1
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.4e-63 248.1 304 47.0
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 5.2e-63 246.1 277 52.3
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.0e-59 234.2 301 46.2
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 2.9e-58 230.3 284 46.8
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.5e-49 201.4 169 61.5
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 2.0e-46 191.0 350 37.7
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.6e-46 190.7 289 43.9
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 2.0e-38 164.5 127 63.0
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 6.0e-27 126.3 99 66.7
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 6.0e-27 126.3 99 66.7
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 3.1e-23 114.0 98 57.1
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 4.0e-23 113.6 107 56.1
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 9.9e-22 109.0 92 63.0
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 9.9e-22 109.0 92 63.0
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.9e-21 107.5 92 62.0
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 4.1e-20 103.6 86 59.3
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 4.0e-15 87.0 90 55.6
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.5e-11 73.9 64 60.9
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.5e-09 67.8 51 56.9


User provided reference genes

Program Settings