Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 3.8e-73 278.1 143 100.0
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 3.2e-11 72.4 157 41.4
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 5.4e-11 71.6 167 37.7
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 1.2e-10 70.5 168 38.1
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 6.0e-10 68.2 84 52.4
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 2.3e-09 66.2 146 37.7
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 3.0e-09 65.9 171 39.8
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 6.6e-09 64.7 149 38.3
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 8.6e-09 64.3 172 38.4
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 1.9e-08 63.2 103 44.7
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 2.5e-08 62.8 169 39.6
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 4.3e-08 62.0 192 35.9
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.2e-07 60.5 170 39.4
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 1.6e-07 60.1 136 38.2
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 2.8e-07 59.3 129 36.4
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 4.7e-07 58.5 108 41.7
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 1.1e-06 57.4 175 35.4
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 1.1e-06 57.4 76 50.0
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 1.1e-06 57.4 145 37.2
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.4e-06 57.0 176 35.8
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 1.8e-06 56.6 169 32.0
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 1.8e-06 56.6 148 39.2
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.8e-06 56.6 187 35.8
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 2.4e-06 56.2 176 34.1
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 2.4e-06 56.2 74 50.0
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 5.2e-06 55.1 80 45.0


User provided reference genes

Program Settings