Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 3.8e-174 614.8 314 100.0
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 1.3e-44 184.5 315 43.8
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 9.6e-37 158.3 295 41.4
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 5.3e-27 125.9 295 33.6
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 6.9e-27 125.6 318 32.4
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 2.0e-26 124.0 296 32.4
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 5.9e-26 122.5 318 31.8
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 6.5e-25 119.0 305 31.5
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.1e-24 118.2 224 39.7
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.4e-24 117.9 318 33.0
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.4e-24 117.9 310 30.3
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 1.9e-24 117.5 299 34.1
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 4.2e-24 116.3 307 30.6
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 7.2e-24 115.5 260 36.2
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 7.2e-24 115.5 311 29.9
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 7.2e-24 115.5 309 31.1
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 9.4e-24 115.2 306 30.7
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 9.4e-24 115.2 291 33.3
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 1.2e-23 114.8 176 38.1
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.2e-23 114.8 326 32.5
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 1.6e-23 114.4 296 35.8
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.1e-23 114.0 308 34.4
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 2.7e-23 113.6 308 34.4
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 2.7e-23 113.6 309 32.0
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 3.6e-23 113.2 290 31.4
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 6.1e-23 112.5 177 42.9
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 7.9e-23 112.1 299 33.4
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.8e-22 110.9 305 29.2
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.8e-22 110.9 292 31.2
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.3e-22 110.5 308 33.4
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 3.0e-22 110.2 305 31.8
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 5.1e-22 109.4 139 50.4
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 5.1e-22 109.4 304 31.9
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 5.1e-22 109.4 309 30.1
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 5.1e-22 109.4 289 32.2
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 6.7e-22 109.0 311 28.6
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 8.8e-22 108.6 311 33.1
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 2.0e-21 107.5 305 31.8
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 2.6e-21 107.1 305 32.1
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 2.6e-21 107.1 277 31.8
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 3.3e-21 106.7 290 32.1
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 3.3e-21 106.7 317 30.6
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 5.7e-21 105.9 319 30.1
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 5.7e-21 105.9 333 29.4
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 7.4e-21 105.5 331 29.0
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 7.4e-21 105.5 289 31.1
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 1.7e-20 104.4 305 29.8
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 2.2e-20 104.0 306 32.7
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 3.7e-20 103.2 304 30.6
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 4.8e-20 102.8 323 28.2
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 4.8e-20 102.8 146 42.5
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.1e-19 101.7 300 29.0
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.1e-19 101.7 283 31.8
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 1.1e-19 101.7 293 29.0
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.1e-19 101.7 321 30.8
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 1.4e-19 101.3 309 27.8
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.8e-19 100.9 303 30.4
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.8e-19 100.9 302 31.5
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.4e-19 100.5 296 32.8
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 5.3e-19 99.4 295 29.2
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 6.9e-19 99.0 155 38.1
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 9.1e-19 98.6 98 55.1
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 9.1e-19 98.6 305 30.8
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 9.1e-19 98.6 147 42.2
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 9.1e-19 98.6 103 54.4
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.2e-18 98.2 137 45.3
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 1.2e-18 98.2 153 41.8
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 1.5e-18 97.8 290 30.0
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 2.0e-18 97.4 220 33.6
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 2.0e-18 97.4 283 31.8
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.4e-18 96.7 322 31.1
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 4.5e-18 96.3 298 29.2
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 5.9e-18 95.9 222 33.3
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 1.3e-17 94.7 292 32.5
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 2.2e-17 94.0 290 29.7
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 5.0e-17 92.8 172 38.4
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.4e-16 91.3 179 35.2
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.4e-16 91.3 312 30.8
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 2.5e-16 90.5 147 42.2
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.7e-15 87.0 318 29.6
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 2.7e-15 87.0 85 57.6
MSTRG.968 Avicennia marina HOM05D007372 ORTHO05D009318 3.6e-15 86.7 209 33.5
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 4.7e-15 86.3 100 50.0
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 2.6e-13 80.5 293 27.6
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 5.7e-13 79.3 155 34.2
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 7.4e-13 79.0 63 60.3
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 3.7e-12 76.6 149 36.9
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 6.3e-12 75.9 137 37.2
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 8.2e-12 75.5 63 60.3
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 1.1e-11 75.1 306 25.5
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.8e-11 74.3 151 35.1
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 2.4e-11 73.9 282 26.6
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 9.1e-11 72.0 91 48.4
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.2e-10 71.6 84 52.4
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.5e-08 64.7 91 46.2
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 2.5e-08 63.9 132 32.6
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 3.6e-07 60.1 67 46.3
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 6.1e-07 59.3 121 38.0
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 4.0e-06 56.6 136 27.9


User provided reference genes

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