Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 5.7e-78 294.3 158 100.0
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.4e-36 156.8 166 59.6
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 5.4e-36 154.8 158 62.7
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 2.0e-35 152.9 167 59.9
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.3e-34 150.2 149 59.7
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.3e-33 145.6 165 56.4
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 4.3e-33 145.2 158 57.0
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 4.3e-33 145.2 158 57.6
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.6e-32 142.1 169 55.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.6e-32 142.1 169 55.0
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.6e-32 142.1 143 62.2
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 3.6e-32 142.1 158 57.0
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.0e-32 141.0 169 52.1
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 8.0e-32 141.0 169 52.1
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 8.0e-32 141.0 158 57.0
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.0e-31 140.6 139 60.4
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.8e-31 139.8 129 65.9
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 3.0e-31 139.0 167 56.3
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.6e-30 136.0 161 56.5
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 4.4e-30 135.2 176 51.7
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 5.7e-30 134.8 95 75.8
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 7.5e-30 134.4 152 53.3
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.5e-30 134.4 161 57.1
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 7.5e-30 134.4 169 53.8
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.1e-28 130.6 83 84.3
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.4e-28 130.2 83 84.3
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.4e-28 130.2 83 84.3
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.8e-28 129.8 159 53.5
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.8e-28 129.8 175 51.4
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.4e-28 129.4 101 70.3
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 3.2e-28 129.0 87 78.2
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 3.2e-28 129.0 124 60.5
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 4.1e-28 128.6 172 52.9
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 4.1e-28 128.6 155 56.1
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 5.4e-28 128.3 92 75.0
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 7.0e-28 127.9 161 54.7
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 7.0e-28 127.9 121 62.8
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.2e-27 127.1 97 72.2
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 1.6e-27 126.7 87 78.2
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 1.6e-27 126.7 148 52.7
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 2.0e-27 126.3 86 76.7
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 2.7e-27 125.9 168 51.8
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.7e-27 125.9 84 79.8
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 2.7e-27 125.9 84 78.6
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.7e-27 125.9 87 73.6
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.5e-27 125.6 162 53.1
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 3.5e-27 125.6 86 75.6
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 3.5e-27 125.6 87 77.0
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 3.5e-27 125.6 165 49.1
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 4.6e-27 125.2 153 51.6
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 5.9e-27 124.8 125 60.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 5.9e-27 124.8 182 47.3
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 5.9e-27 124.8 84 79.8
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 5.9e-27 124.8 86 74.4
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 7.8e-27 124.4 162 53.1
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 7.8e-27 124.4 175 50.9
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.0e-26 124.0 84 79.8
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.3e-26 123.6 86 74.4
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.3e-26 123.6 90 73.3
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.3e-26 123.6 90 73.3
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.3e-26 123.6 83 78.3
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.7e-26 123.2 161 51.6
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 1.7e-26 123.2 101 65.3
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 2.3e-26 122.9 86 72.1
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.3e-26 122.9 86 72.1
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 2.3e-26 122.9 86 72.1
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.3e-26 122.9 86 72.1
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.3e-26 122.9 86 72.1
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.0e-26 122.5 86 69.8
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.0e-26 122.5 107 65.4
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.0e-26 122.5 107 65.4
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 3.0e-26 122.5 91 70.3
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.9e-26 122.1 155 52.9
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 5.0e-26 121.7 172 50.6
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.6e-26 121.3 107 64.5
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 6.6e-26 121.3 182 45.1
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 8.6e-26 120.9 82 79.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 8.6e-26 120.9 119 58.0
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 8.6e-26 120.9 119 58.0
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.1e-25 120.6 138 55.8
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.1e-25 120.6 119 63.0
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.1e-25 120.6 107 64.5
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.1e-25 120.6 179 46.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.5e-25 120.2 116 60.3
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.5e-25 120.2 116 60.3
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.5e-25 120.2 84 76.2
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.9e-25 119.8 149 53.7
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 3.3e-25 119.0 83 77.1
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 3.3e-25 119.0 152 52.0
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 3.3e-25 119.0 182 44.5
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 3.3e-25 119.0 81 79.0
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 3.3e-25 119.0 149 54.4
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 4.3e-25 118.6 159 49.1
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 4.3e-25 118.6 86 70.9
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 9.5e-25 117.5 86 72.1
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 9.5e-25 117.5 81 79.0
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.0e-23 114.0 83 69.9
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.1e-23 112.5 98 61.2
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.2e-23 111.7 120 54.2
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 6.8e-23 111.3 77 74.0
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 2.6e-22 109.4 86 66.3
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 7.5e-22 107.8 158 46.8
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 4.9e-21 105.1 85 65.9
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 4.9e-21 105.1 83 68.7
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.9e-20 103.2 83 66.3
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.4e-20 102.8 154 42.9
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 5.4e-20 101.7 154 42.9
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.2e-19 100.5 159 45.9
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.6e-19 100.1 96 57.3
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 2.0e-19 99.8 86 61.6
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 7.3e-17 91.3 64 71.9
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.8e-16 89.4 98 52.0
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 1.1e-15 87.4 84 58.3
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.8e-15 86.7 93 51.6
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 8.9e-15 84.3 91 51.6
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 6.0e-11 71.6 84 48.8
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 6.2e-08 61.6 78 51.3


User provided reference genes

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