Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 1.0e-38 164.1 183 100.0
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 1.8e-22 110.2 62 91.9
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.9e-21 106.7 61 90.2
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 3.3e-21 105.9 65 83.1
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 4.3e-21 105.5 65 84.6
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 5.6e-21 105.1 60 90.0
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 7.4e-21 104.8 64 82.8
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 7.4e-21 104.8 61 88.5
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 7.4e-21 104.8 61 88.5
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 9.6e-21 104.4 63 85.7
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 1.3e-20 104.0 63 85.7
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 3.7e-20 102.4 61 85.2
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 6.2e-20 101.7 61 85.2
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 6.2e-20 101.7 63 82.5
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 6.2e-20 101.7 65 80.0
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 8.2e-20 101.3 66 80.3
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 8.2e-20 101.3 65 81.5
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 8.2e-20 101.3 60 85.0
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 1.4e-19 100.5 61 85.2
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 1.4e-19 100.5 61 85.2
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 1.4e-19 100.5 61 83.6
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.4e-19 100.5 70 80.0
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.8e-19 100.1 63 81.0
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.8e-19 100.1 63 81.0
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.8e-19 100.1 63 81.0
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 1.8e-19 100.1 65 76.9
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 3.1e-19 99.4 69 78.3
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 3.1e-19 99.4 63 81.0
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 3.1e-19 99.4 69 78.3
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 4.0e-19 99.0 63 81.0
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 5.3e-19 98.6 61 83.6
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 5.3e-19 98.6 60 85.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 5.3e-19 98.6 65 76.9
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 5.3e-19 98.6 65 75.4
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 6.9e-19 98.2 56 89.3
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 6.9e-19 98.2 62 80.6
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 9.0e-19 97.8 63 79.4
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 1.2e-18 97.4 63 79.4
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.2e-18 97.4 63 79.4
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 1.2e-18 97.4 62 79.0
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 1.2e-18 97.4 61 82.0
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 1.5e-18 97.1 61 82.0
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.5e-18 97.1 63 79.4
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.5e-18 97.1 61 80.3
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.5e-18 97.1 61 78.7
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 1.5e-18 97.1 61 80.3
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 2.0e-18 96.7 63 79.4
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 2.0e-18 96.7 59 81.4
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 2.0e-18 96.7 67 77.6
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 2.6e-18 96.3 61 80.3
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 2.6e-18 96.3 61 83.6
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 2.6e-18 96.3 61 82.0
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 3.4e-18 95.9 66 74.2
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 3.4e-18 95.9 66 74.2
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 3.4e-18 95.9 62 77.4
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 3.4e-18 95.9 66 77.3
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.5e-18 95.5 63 77.8
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 4.5e-18 95.5 59 81.4
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 4.5e-18 95.5 65 75.4
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 4.5e-18 95.5 63 77.8
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 4.5e-18 95.5 61 80.3
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 5.8e-18 95.1 61 80.3
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 5.8e-18 95.1 61 80.3
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 5.8e-18 95.1 62 77.4
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 7.6e-18 94.7 59 79.7
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 7.6e-18 94.7 59 79.7
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 7.6e-18 94.7 59 79.7
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 7.6e-18 94.7 59 79.7
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 7.6e-18 94.7 59 81.4
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 7.6e-18 94.7 63 77.8
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 1.0e-17 94.4 59 79.7
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 1.0e-17 94.4 63 76.2
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 1.7e-17 93.6 59 81.4
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.7e-17 93.6 61 80.3
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 2.2e-17 93.2 59 79.7
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 2.9e-17 92.8 63 74.6
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 3.8e-17 92.4 61 77.0
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 8.4e-17 91.3 63 74.6
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 8.4e-17 91.3 63 76.2
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 1.9e-16 90.1 64 75.0
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 1.9e-16 90.1 62 74.2
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 2.5e-16 89.7 54 85.2
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 1.6e-15 87.0 50 88.0
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 7.9e-15 84.7 52 82.7
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.0e-14 84.3 62 79.0
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 1.3e-14 84.0 51 84.3
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 1.3e-14 84.0 66 71.2
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 3.0e-14 82.8 59 72.9
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 3.0e-14 82.8 51 82.4
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 8.7e-14 81.3 66 66.7
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 2.5e-13 79.7 86 54.7
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 9.7e-13 77.8 52 75.0
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 3.1e-11 72.8 54 74.1
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 3.9e-06 55.8 36 72.2
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 8.8e-06 54.7 32 81.2


User provided reference genes

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