Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold81G26084 Striga asiatica HOM05D008052 ORTHO05D010155 3.3e-120 435.3 255 100.0
MSTRG.28007 Avicennia marina HOM05D008052 ORTHO05D010155 3.9e-44 182.6 197 50.8
SalBow3G2994 Salvia bowleyana HOM05D008052 ORTHO05D010155 1.5e-43 180.6 196 51.0
Migut.N01951 Erythranthe guttata HOM05D008052 ORTHO05D010155 1.2e-42 177.6 152 61.8
Cc02_g33610 Coffea canephora HOM05D008052 ORTHO05D010155 4.2e-30 136.0 196 42.3
SGA_v2.0_scaffold111G31473 Striga asiatica HOM05D002519 ORTHO05D010155 7.6e-24 115.2 81 72.8
SGA_v2.0_scaffold162G37917 Striga asiatica HOM05D002519 ORTHO05D002747 1.7e-23 114.0 62 88.7
Nitab4.5_0004570g0050 Nicotiana tabacum HOM05D008052 ORTHO05D010155 2.7e-21 106.7 194 39.2
Sopen12g003550 Solanum pennellii HOM05D008052 ORTHO05D010155 7.9e-21 105.1 185 37.3
Nitab4.5_0000743g0110 Nicotiana tabacum HOM05D008052 ORTHO05D010155 1.3e-20 104.4 190 38.4
TAR362G0883 Trochodendron aralioides HOM05D008052 ORTHO05D010155 1.8e-20 104.0 160 42.5
PGSC0003DMG400000290 Solanum tuberosum HOM05D008052 ORTHO05D010155 4.8e-18 95.9 148 38.5
TAR633G0175 Trochodendron aralioides HOM05D008052 ORTHO05D010155 3.4e-16 89.7 168 37.5
PSO170G6008 Papaver somniferum HOM05D008052 ORTHO05D010155 2.7e-13 80.1 154 39.0
Thecc.05G305400 Theobroma cacao HOM05D008052 ORTHO05D010155 7.9e-13 78.6 187 34.2
CANSAT54G0621 Cannabis sativa HOM05D008052 ORTHO05D010155 1.8e-12 77.4 163 35.0
DCAR_022183 Daucus carota HOM05D008052 ORTHO05D010155 1.8e-12 77.4 130 39.2
ClCG02G015920 Citrullus lanatus HOM05D008052 ORTHO05D010155 3.9e-12 76.3 161 33.5
Cpa.g.sc48.31 Carica papaya HOM05D008052 ORTHO05D010155 1.1e-11 74.7 164 35.4
PSO302G0085 Papaver somniferum HOM05D008052 ORTHO05D010155 3.3e-11 73.2 154 41.6
Ah.05g168010 Amaranthus hybridus HOM05D038607 ORTHO05D010155 4.3e-11 72.8 154 36.4
Sc09g0003250 Simmondsia chinensis HOM05D008052 ORTHO05D010155 1.3e-10 71.2 168 31.5
Duzib106G0088 Durio zibethinus HOM05D008052 ORTHO05D010155 2.8e-10 70.1 159 32.1
Nn4g26221 Nelumbo nucifera HOM05D008052 ORTHO05D010155 2.8e-10 70.1 155 31.6
Ah.06g189190 Amaranthus hybridus HOM05D038607 ORTHO05D010155 4.8e-10 69.3 154 35.7
CsaV3_2G005120 Cucumis sativus L. HOM05D008052 ORTHO05D000003 6.3e-10 68.9 159 31.4
Gohir.A11G296000 Gossypium hirsutum HOM05D008052 ORTHO05D010155 6.3e-10 68.9 151 34.4
Gorai.007G342900 Gossypium raimondii HOM05D008052 ORTHO05D010155 6.3e-10 68.9 151 33.8
TWI56G0838 Tripterygium wilfordii HOM05D008052 ORTHO05D010155 1.4e-09 67.8 200 30.0
Ciclev10003106m.g Citrus clementina HOM05D008052 ORTHO05D010155 4.1e-09 66.2 150 30.7
COL.COLO4_13498 Corchorus olitorius HOM05D008052 ORTHO05D010155 4.1e-09 66.2 185 33.0
Gohir.D11G310900 Gossypium hirsutum HOM05D008052 ORTHO05D010155 4.1e-09 66.2 151 33.8
Sabra13G0025900 Salix brachista HOM05D008052 ORTHO05D010155 5.3e-09 65.9 225 29.8
Potri.013G024500 Populus trichocarpa HOM05D008052 ORTHO05D010155 6.9e-09 65.5 176 33.5
Atru.chr2.447 Acer truncatum HOM05D008052 ORTHO05D010155 9.0e-09 65.1 214 33.6
MELO3C004280.2 Cucumis melo HOM05D008052 ORTHO05D010155 5.8e-08 62.4 159 30.2
Manes.09G165300 Manihot esculenta HOM05D008052 ORTHO05D010155 1.0e-07 61.6 161 32.3
SGA_v2.0_scaffold13G06679 Striga asiatica HOM05D002519 ORTHO05D010155 3.8e-07 59.7 43 72.1
Aqoxy2G03290 Aquilegia oxysepala HOM05D008052 ORTHO05D010155 1.4e-06 57.8 162 37.0
PGR031G3742 Punica granatum HOM05D008052 ORTHO05D010155 1.9e-06 57.4 142 31.0
unitig_0.g2377 Utricularia gibba HOM05D008052 ORTHO05D010155 2.5e-06 57.0 98 35.7
Sed0004902 Sechium edule HOM05D008052 ORTHO05D010155 7.2e-06 55.5 157 28.7


User provided reference genes

Program Settings