Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 9.5e-158 560.1 271 100.0
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 1.6e-101 373.2 258 69.8
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 1.1e-100 370.5 273 67.0
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 4.3e-94 348.6 270 62.2
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 2.1e-88 329.7 260 61.5
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 4.7e-88 328.6 270 60.0
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 2.3e-87 326.2 279 58.4
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 3.0e-87 325.9 270 58.1
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 6.7e-87 324.7 255 59.6
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 8.8e-87 324.3 270 57.8
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 8.8e-87 324.3 270 57.8
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 8.2e-85 317.8 284 57.0
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 5.9e-83 311.6 260 59.2
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 7.7e-83 311.2 259 59.1
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 1.6e-80 303.5 264 56.4
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 6.1e-80 301.6 268 56.0
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 1.0e-79 300.8 263 54.8
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 3.0e-79 299.3 272 55.9
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 3.0e-79 299.3 235 61.7
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 5.2e-79 298.5 261 55.9
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 5.7e-78 295.0 266 55.6
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 7.4e-78 294.7 268 56.0
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 1.7e-77 293.5 257 54.5
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.8e-77 292.7 268 55.6
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 2.8e-77 292.7 260 55.8
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 6.3e-77 291.6 268 55.2
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 1.1e-76 290.8 270 54.1
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 1.1e-76 290.8 263 55.5
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.8e-76 290.0 268 54.9
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 3.1e-76 289.3 256 56.2
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 9.1e-76 287.7 269 52.8
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 9.1e-76 287.7 264 54.2
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 5.9e-75 285.0 266 54.9
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 1.0e-74 284.3 258 52.3
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 1.3e-74 283.9 281 50.5
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 1.9e-73 280.0 256 52.0
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 3.2e-73 279.3 272 53.7
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 9.4e-73 277.7 261 53.6
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 2.7e-72 276.2 253 53.8
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 3.6e-72 275.8 265 52.5
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 4.7e-72 275.4 253 53.8
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 8.0e-72 274.6 273 50.5
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 2.3e-71 273.1 252 53.2
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 3.0e-71 272.7 261 50.6
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 4.0e-71 272.3 257 52.9
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 5.2e-71 271.9 274 50.7
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 5.2e-71 271.9 257 52.5
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 5.2e-71 271.9 258 52.7
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 1.2e-70 270.8 230 55.7
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 4.4e-70 268.9 272 50.0
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 4.4e-70 268.9 250 51.2
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 5.7e-70 268.5 262 51.9
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 2.8e-69 266.2 265 50.2
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 8.2e-69 264.6 263 51.0
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 1.1e-68 264.2 273 48.0
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 1.4e-68 263.8 256 50.4
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 3.1e-68 262.7 260 48.8
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 4.1e-68 262.3 264 50.0
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 5.3e-68 261.9 254 50.8
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 9.1e-68 261.2 263 49.0
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 2.0e-67 260.0 227 53.3
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 2.7e-67 259.6 256 50.0
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 4.5e-67 258.8 256 50.0
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 5.9e-67 258.5 261 50.6
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 5.9e-67 258.5 265 48.3
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 5.0e-66 255.4 272 46.3
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 1.1e-65 254.2 263 48.7
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 2.5e-65 253.1 237 54.0
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 2.5e-65 253.1 233 54.5
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 5.5e-65 251.9 267 47.6
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 7.2e-65 251.5 264 48.9
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 1.6e-64 250.4 252 48.4
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 2.1e-64 250.0 247 49.0
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 3.6e-64 249.2 262 47.7
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 6.1e-64 248.4 258 47.7
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 1.0e-63 247.7 272 46.0
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 1.0e-63 247.7 272 46.0
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 1.0e-63 247.7 263 46.8
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 4.0e-63 245.7 263 46.4
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 5.2e-63 245.4 272 47.1
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 6.8e-63 245.0 265 47.2
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 6.8e-63 245.0 273 44.7
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.2e-62 244.2 237 51.5
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 1.5e-62 243.8 219 51.6
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 2.0e-62 243.4 235 52.3
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 2.6e-62 243.0 238 52.1
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 4.4e-62 242.3 235 53.6
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 6.3e-61 238.4 273 46.5
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 4.1e-60 235.7 230 51.7
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 1.6e-59 233.8 198 53.5
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 5.9e-59 231.9 229 52.4
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 1.7e-58 230.3 239 46.4
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 1.7e-58 230.3 259 47.5
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 1.0e-55 221.1 236 50.0
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 1.4e-55 220.7 263 46.0
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 2.3e-55 219.9 234 47.9
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 7.8e-51 204.9 182 53.8
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 3.8e-50 202.6 244 45.5
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 1.8e-47 193.7 222 45.5
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 1.5e-46 190.7 160 55.6
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 1.1e-41 174.5 241 41.5
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 9.5e-41 171.4 207 44.0
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 2.6e-38 163.3 176 46.6
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 7.0e-36 155.2 169 45.6
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 3.9e-34 149.4 219 38.4
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 1.6e-32 144.1 192 36.5
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 5.2e-31 139.0 224 35.3
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 8.9e-31 138.3 203 39.9
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 4.4e-30 136.0 247 34.4
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 4.4e-30 136.0 242 36.4
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 2.9e-29 133.3 241 34.9
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 1.4e-28 131.0 239 34.3
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 5.4e-28 129.0 83 66.3
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 2.1e-27 127.1 226 31.4
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 4.3e-25 119.4 133 48.1
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 3.1e-23 113.2 104 52.9
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 9.9e-22 108.2 119 47.9
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 9.9e-22 108.2 146 43.2
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 2.2e-21 107.1 126 47.6
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 4.7e-16 89.4 86 52.3
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 6.2e-16 89.0 84 52.4
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 1.7e-13 80.9 164 35.4
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 2.1e-11 73.9 70 54.3
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 2.8e-08 63.5 55 56.4
CBR_g7977 Chara braunii HOM05D006625 ORTHO05D008060 1.8e-07 60.8 110 31.8
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 6.9e-07 58.9 276 24.3
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 4.5e-06 56.2 138 28.3


User provided reference genes

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