Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 5.6e-95 350.9 173 100.0
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.4e-61 239.2 174 67.8
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 3.8e-59 231.9 171 67.8
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 4.1e-53 211.8 175 65.1
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.1e-45 185.7 174 56.9
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 6.9e-45 184.5 117 72.6
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.5e-44 183.3 113 73.5
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.5e-44 183.3 155 61.9
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 2.0e-44 183.0 173 58.4
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 5.9e-44 181.4 164 59.1
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 3.8e-43 178.7 172 53.5
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 8.5e-43 177.6 161 55.9
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 8.5e-43 177.6 136 64.0
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 8.5e-43 177.6 169 55.6
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.1e-42 177.2 136 63.2
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.1e-42 177.2 173 56.6
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 1.4e-42 176.8 129 65.9
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 2.5e-42 176.0 133 61.7
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 4.2e-42 175.3 164 56.1
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 7.2e-42 174.5 153 60.8
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 7.2e-42 174.5 138 61.6
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 9.4e-42 174.1 120 67.5
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.2e-41 173.7 159 56.6
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.6e-41 173.3 119 65.5
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 1.6e-41 173.3 127 63.0
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 1.6e-41 173.3 105 75.2
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.7e-41 172.6 109 73.4
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 2.7e-41 172.6 113 69.9
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 3.6e-41 172.2 114 67.5
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 4.6e-41 171.8 127 63.0
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 6.1e-41 171.4 128 63.3
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 6.1e-41 171.4 166 55.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 1.0e-40 170.6 111 70.3
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.0e-40 170.6 111 70.3
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.4e-40 170.2 138 60.9
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 1.8e-40 169.9 164 51.8
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.8e-40 169.9 115 70.4
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.0e-40 169.1 131 63.4
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 3.0e-40 169.1 204 50.0
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 5.1e-40 168.3 165 53.9
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 5.1e-40 168.3 139 59.7
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 5.1e-40 168.3 160 54.4
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 8.8e-40 167.5 141 60.3
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 8.8e-40 167.5 160 54.4
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 1.5e-39 166.8 166 53.0
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 3.3e-39 165.6 160 54.4
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 7.4e-39 164.5 104 68.3
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 9.7e-39 164.1 115 67.8
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.3e-38 163.7 106 67.9
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 2.2e-38 162.9 105 69.5
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.8e-38 162.5 110 65.5
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.7e-38 162.2 115 67.0
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 3.7e-38 162.2 109 66.1
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 4.8e-38 161.8 162 52.5
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 4.8e-38 161.8 137 60.6
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 1.4e-37 160.2 165 53.3
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.4e-37 160.2 106 67.0
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.8e-37 159.8 174 54.6
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 3.1e-37 159.1 154 53.9
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 4.1e-37 158.7 154 52.6
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 4.1e-37 158.7 154 53.2
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 4.1e-37 158.7 159 54.1
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 5.3e-37 158.3 154 52.6
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 5.3e-37 158.3 100 73.0
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 6.9e-37 157.9 106 65.1
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 6.9e-37 157.9 106 65.1
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 9.1e-37 157.5 105 65.7
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 9.1e-37 157.5 105 65.7
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 9.1e-37 157.5 105 65.7
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 9.1e-37 157.5 105 65.7
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 2.0e-36 156.4 120 62.5
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 2.6e-36 156.0 127 59.1
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 4.5e-36 155.2 121 61.2
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 5.9e-36 154.8 107 62.6
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 7.7e-36 154.5 125 60.8
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.3e-35 153.7 169 54.4
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 3.2e-34 149.1 144 54.9
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 1.2e-33 147.1 98 65.3
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.1e-33 146.4 163 48.5
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 3.9e-32 142.1 178 44.9
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 2.0e-31 139.8 187 47.1
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 3.3e-31 139.0 98 62.2
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 9.7e-31 137.5 203 43.3
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.8e-30 135.2 90 68.9
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.8e-30 135.2 90 68.9
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 1.1e-29 134.0 105 56.2
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 1.8e-29 133.3 145 52.4
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 4.1e-29 132.1 94 64.9
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 4.1e-29 132.1 95 64.2
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 5.3e-29 131.7 118 52.5
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 9.1e-29 131.0 95 63.2
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 4.5e-28 128.6 137 54.0
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 5.9e-28 128.3 102 58.8
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.5e-26 123.6 145 50.3
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.4e-24 117.1 142 46.5
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 1.8e-24 116.7 91 59.3
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 3.0e-24 115.9 137 48.2
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.3e-22 110.5 69 71.0
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.4e-21 107.1 75 70.7
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 7.7e-20 101.3 76 59.2
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 4.7e-17 92.0 56 71.4
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 1.3e-14 84.0 61 68.9
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 1.0e-11 74.3 148 36.5
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 2.9e-11 72.8 101 45.5
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 4.7e-09 65.5 81 48.1
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 1.8e-08 63.5 112 36.6
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 5.2e-08 62.0 91 42.9


User provided reference genes

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