Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 8.9e-241 836.6 458 100.0
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 2.8e-101 373.2 456 53.1
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 3.5e-88 329.7 458 48.3
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 2.1e-80 303.9 470 44.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.1e-78 298.1 478 42.7
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 3.4e-75 286.6 462 40.7
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 4.9e-74 282.7 460 42.6
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.8e-71 274.2 486 42.4
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.4e-68 264.6 425 42.8
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.8e-68 264.2 494 40.5
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 6.9e-68 262.3 425 42.6
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 2.6e-67 260.4 414 42.0
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.7e-66 257.7 366 43.2
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 8.5e-66 255.4 403 42.7
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 8.5e-66 255.4 466 40.6
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 1.1e-65 255.0 512 37.9
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 7.9e-64 248.8 472 38.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.8e-63 247.7 415 39.8
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.3e-63 247.3 353 45.3
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 3.9e-63 246.5 474 37.6
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 2.5e-62 243.8 428 40.4
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 3.3e-62 243.4 492 35.8
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.3e-62 243.0 415 39.5
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 7.4e-62 242.3 390 40.8
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.3e-61 241.5 530 36.4
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 3.4e-59 233.4 437 37.5
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.7e-58 231.1 464 37.3
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 6.5e-58 229.2 501 33.3
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 8.5e-58 228.8 421 38.2
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 1.4e-57 228.0 419 37.9
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.5e-57 227.3 376 40.4
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 3.2e-57 226.9 424 39.4
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 5.5e-57 226.1 520 35.6
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 7.2e-57 225.7 454 36.6
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.2e-56 224.9 406 39.2
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 7.9e-56 222.2 406 38.7
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 1.8e-55 221.1 565 35.0
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 2.3e-55 220.7 525 35.0
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 5.1e-55 219.5 514 36.4
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 5.1e-55 219.5 364 40.9
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.5e-54 218.0 423 38.3
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.5e-54 218.0 430 36.5
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 2.0e-54 217.6 431 37.4
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 4.4e-54 216.5 424 36.1
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 4.8e-53 213.0 451 38.6
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 8.2e-53 212.2 471 39.9
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.1e-52 209.9 409 37.2
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 5.3e-52 209.5 359 38.7
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.0e-50 205.3 416 36.8
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.3e-50 204.9 526 34.8
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.3e-50 204.9 469 35.0
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 2.9e-50 203.8 329 39.2
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.1e-49 201.8 356 37.6
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 2.5e-49 200.7 443 35.4
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 4.2e-49 199.9 488 37.1
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 5.5e-49 199.5 308 40.6
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.2e-48 198.4 423 35.7
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 3.6e-48 196.8 312 42.6
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 6.1e-48 196.1 392 36.2
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.8e-47 194.5 433 34.2
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.8e-47 194.5 423 34.0
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.8e-47 194.5 479 33.8
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 6.7e-47 192.6 513 33.3
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 8.8e-47 192.2 400 37.5
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.1e-46 191.8 475 34.1
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.5e-46 191.4 436 38.1
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.0e-46 191.0 422 34.6
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 5.7e-46 189.5 409 34.7
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 5.7e-46 189.5 452 35.0
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 6.3e-45 186.0 568 30.8
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.1e-44 185.3 519 35.8
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 1.4e-44 184.9 504 34.7
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.4e-44 184.1 497 33.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.1e-44 183.7 442 34.2
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 2.6e-43 180.6 473 33.0
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 5.9e-43 179.5 427 34.0
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 3.8e-42 176.8 419 33.4
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.1e-41 175.3 397 34.8
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.9e-41 174.5 442 33.3
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 9.4e-41 172.2 471 33.1
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 1.6e-40 171.4 469 34.8
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 8.0e-40 169.1 489 30.9
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 1.4e-39 168.3 490 33.1
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.8e-39 167.9 390 33.6
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 8.8e-39 165.6 402 32.6
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.2e-38 165.2 435 31.0
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.6e-38 164.1 437 32.3
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 2.6e-38 164.1 538 30.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 4.4e-38 163.3 364 32.7
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 5.7e-38 162.9 482 32.2
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 4.8e-37 159.8 370 33.8
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.4e-36 158.3 374 36.4
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.8e-36 157.9 407 34.9
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.6e-35 154.8 441 31.3
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 5.0e-34 149.8 342 36.5
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 1.5e-33 148.3 173 48.0
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 7.2e-33 146.0 473 30.0
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.6e-32 143.7 414 31.9
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 8.0e-32 142.5 527 28.3
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.8e-31 141.4 353 33.1
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 5.2e-31 139.8 507 27.8
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 6.8e-31 139.4 462 31.4
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 2.6e-30 137.5 170 48.2
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 2.6e-30 137.5 446 30.9
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.8e-28 131.3 404 30.2
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.8e-28 131.3 404 30.2
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 2.4e-28 131.0 410 30.7
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 4.1e-28 130.2 404 29.7
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 2.7e-27 127.5 458 28.2
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.5e-27 127.1 161 44.1
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 9.5e-25 119.0 237 35.4
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 3.8e-18 97.1 422 26.5
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.0e-15 87.4 281 31.0
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.2e-14 85.5 188 33.5
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 2.2e-13 81.3 115 43.5
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 9.2e-12 75.9 92 48.9


User provided reference genes

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