Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.5e-155 552.7 272 100.0
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.0e-87 327.4 250 66.0
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 3.8e-82 308.9 233 63.5
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.1e-81 307.4 230 66.5
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.3e-79 299.7 234 63.2
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 7.5e-78 294.7 236 62.7
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.5e-75 285.8 231 61.9
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 4.5e-75 285.4 234 57.7
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.7e-74 283.5 240 60.0
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 2.2e-74 283.1 235 59.1
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 3.8e-74 282.3 232 61.6
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 3.8e-74 282.3 237 57.0
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 8.5e-74 281.2 232 61.2
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 8.5e-74 281.2 232 61.2
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.1e-73 280.8 238 59.7
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 4.2e-73 278.9 238 60.9
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.6e-72 276.9 236 58.1
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.1e-72 276.6 237 61.6
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 3.6e-72 275.8 234 57.7
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 3.6e-72 275.8 237 61.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 8.0e-72 274.6 229 60.7
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 8.0e-72 274.6 235 59.6
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 1.0e-71 274.2 235 59.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.4e-71 273.9 212 60.8
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.4e-71 273.9 212 60.8
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 2.3e-71 273.1 242 57.4
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 8.8e-71 271.2 242 57.0
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 1.2e-70 270.8 239 59.0
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 3.4e-70 269.2 244 59.8
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 3.4e-70 269.2 223 59.2
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 4.4e-70 268.9 217 59.9
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 4.9e-69 265.4 234 58.1
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 1.8e-68 263.5 244 56.1
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.8e-68 263.5 208 60.1
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 4.1e-68 262.3 235 55.7
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.0e-68 261.5 250 55.2
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.6e-67 260.4 242 55.8
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 2.0e-67 260.0 231 55.0
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 7.7e-67 258.1 216 59.3
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 3.8e-66 255.8 241 54.8
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 6.6e-66 255.0 245 54.3
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 6.6e-66 255.0 236 55.5
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 8.6e-66 254.6 214 58.9
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.9e-65 253.4 250 54.4
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.9e-65 253.4 232 54.3
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.5e-65 253.1 239 56.5
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 9.5e-65 251.1 219 58.0
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 9.5e-65 251.1 236 50.8
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.6e-64 250.4 233 54.5
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 2.1e-64 250.0 234 53.4
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 2.1e-64 250.0 195 64.6
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.8e-64 249.6 252 51.6
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 8.0e-64 248.1 235 53.6
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.0e-63 247.7 222 57.7
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.4e-63 247.3 234 55.1
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.8e-63 246.9 182 61.0
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.8e-63 246.9 249 53.0
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.8e-63 246.9 248 52.4
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 2.3e-63 246.5 215 54.9
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.8e-63 245.0 219 55.3
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 2.0e-62 243.4 234 54.3
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 2.0e-62 243.4 216 57.4
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 3.4e-62 242.7 232 53.9
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 9.8e-62 241.1 234 52.6
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.7e-61 240.4 234 56.0
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.7e-61 240.4 250 51.2
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 2.9e-61 239.6 233 52.4
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 6.4e-61 238.4 220 55.5
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.8e-60 236.9 231 53.7
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.8e-60 236.9 231 54.1
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 1.8e-60 236.9 234 55.1
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 3.2e-60 236.1 232 53.4
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.7e-59 233.0 184 63.6
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 5.9e-59 231.9 228 53.1
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 5.9e-59 231.9 228 53.1
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 1.3e-58 230.7 278 47.1
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 3.9e-58 229.2 211 51.2
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 8.6e-58 228.0 263 48.3
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 4.3e-57 225.7 279 46.2
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 5.6e-57 225.3 171 60.8
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 1.6e-56 223.8 235 48.9
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 4.0e-55 219.2 211 53.1
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.4e-52 210.7 235 48.5
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.3e-50 204.1 202 52.0
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 3.0e-50 203.0 250 45.2
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 7.3e-49 198.4 166 58.4
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 6.2e-48 195.3 166 58.4
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 4.0e-47 192.6 152 57.9
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 8.9e-47 191.4 178 55.1
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 6.4e-45 185.3 239 45.2
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 3.2e-44 183.0 210 48.1
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-44 183.0 174 51.1
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 9.2e-44 181.4 236 46.6
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 2.7e-43 179.9 218 42.2
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 3.5e-43 179.5 136 61.8
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.8e-43 178.3 162 51.9
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.5e-41 174.1 151 55.6
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 9.5e-41 171.4 233 42.1
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.6e-40 170.6 142 57.0
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 3.4e-38 162.9 172 47.7
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 3.0e-34 149.8 218 38.1
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 5.6e-33 145.6 159 50.3
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 2.1e-32 143.7 219 38.4
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.2e-30 137.9 80 83.8
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 9.9e-30 134.8 106 58.5
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 8.1e-24 115.2 131 49.6
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.4e-21 105.5 73 64.4
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 2.4e-20 103.6 60 76.7
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 5.4e-20 102.4 69 69.6
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 6.7e-18 95.5 161 32.9
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 5.3e-15 85.9 261 26.8
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.4e-13 78.6 177 33.3
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.6e-11 74.3 96 45.8
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.1e-10 69.3 56 60.7
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 1.9e-09 67.4 81 45.7
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.1e-08 63.9 56 51.8
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 2.1e-08 63.9 153 32.0
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.1e-07 61.6 37 64.9
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 5.3e-07 59.3 36 63.9
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 4.5e-06 56.2 48 58.3


User provided reference genes

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