Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25910 Striga asiatica HOM05D000083 ORTHO05D399192 1.2e-80 303.1 149 100.0
SGA_v2.0_scaffold363G49940 Striga asiatica HOM05D000083 ORTHO05D000196 3.1e-09 65.9 34 82.4
Migut.H01812 Erythranthe guttata HOM05D000083 ORTHO05D000196 2.2e-07 59.7 34 70.6
SGA_v2.0_scaffold8G04341 Striga asiatica HOM05D000083 ORTHO05D000196 4.9e-07 58.5 34 73.5
Migut.M01738 Erythranthe guttata HOM05D000083 ORTHO05D000196 6.4e-07 58.2 57 45.6
MSTRG.14442 Avicennia marina HOM05D000083 ORTHO05D000196 1.1e-06 57.4 36 58.3
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 1.4e-06 57.0 39 56.4
CARHR268430 Cardamine hirsuta HOM05D000083 ORTHO05D000196 2.4e-06 56.2 55 49.1
Hma1.2p1_0249F.1_g102230 Hydrangea macrophylla HOM05D000083 ORTHO05D000196 2.4e-06 56.2 36 58.3
Prupe.4G217600 Prunus persica HOM05D000083 ORTHO05D000196 3.2e-06 55.8 55 45.5
BcaC03g14268 Brassica carinata HOM05D000083 ORTHO05D000196 4.2e-06 55.5 55 47.3
C02p16460 Brassica napus HOM05D000083 ORTHO05D000196 4.2e-06 55.5 55 47.3
Duzib170G0411 Durio zibethinus HOM05D000083 ORTHO05D000196 4.2e-06 55.5 57 43.9
Aqoxy1G03375 Aquilegia oxysepala HOM05D000083 ORTHO05D000196 5.5e-06 55.1 57 43.9
BcaB08g35871 Brassica carinata HOM05D000083 ORTHO05D000196 5.5e-06 55.1 55 49.1
Aa31LG5G12070 Aethionema arabicum HOM05D000083 ORTHO05D000196 7.1e-06 54.7 41 56.1
COL.COLO4_09687 Corchorus olitorius HOM05D000083 ORTHO05D000196 7.1e-06 54.7 55 45.5
ECA240G1550 Erigeron canadensis HOM05D000083 ORTHO05D000196 7.1e-06 54.7 37 51.4
MD00G1159200 Malus domestica HOM05D000083 ORTHO05D000196 7.1e-06 54.7 56 42.9
BcaC04g20271 Brassica carinata HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 47.3
A10p12370 Brassica napus HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 47.3
C03p16660 Brassica napus HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 47.3
C09p45910 Brassica napus HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 47.3
BolC9t57434H Brassica oleracea HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 47.3
Carub.0008s1538 Capsella rubella HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 49.1
ClCG09G010940 Citrullus lanatus HOM05D000083 ORTHO05D000196 9.3e-06 54.3 36 58.3
Ciclev10010150m.g Citrus clementina HOM05D000083 ORTHO05D000196 9.3e-06 54.3 57 42.1
Dinv39724 Davidia involucrata HOM05D000083 ORTHO05D000196 9.3e-06 54.3 41 53.7
Duzib213G0097 Durio zibethinus HOM05D000083 ORTHO05D000196 9.3e-06 54.3 55 43.6
Thhalv10015237m.g Eutrema salsugineum HOM05D000083 ORTHO05D000196 9.3e-06 54.3 57 45.6
Lj8P170T61 Lonicera japonica HOM05D000083 ORTHO05D000196 9.3e-06 54.3 57 43.9


User provided reference genes

Program Settings