Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 1.1e-136 490.0 248 100.0
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 6.8e-78 294.7 209 74.2
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 9.8e-77 290.8 206 69.4
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 2.5e-72 276.2 216 67.6
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 4.7e-71 271.9 200 69.0
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 1.4e-70 270.4 185 71.9
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 4.0e-70 268.9 185 71.4
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 5.2e-70 268.5 190 70.0
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 7.5e-69 264.6 183 72.7
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 1.3e-68 263.8 192 67.2
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 2.2e-68 263.1 197 67.0
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 3.7e-68 262.3 195 66.2
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 6.4e-68 261.5 206 65.5
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 1.9e-67 260.0 206 64.1
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 1.9e-67 260.0 189 67.2
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 2.4e-67 259.6 186 67.2
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 5.4e-67 258.5 192 68.2
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 5.4e-67 258.5 204 65.7
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 7.1e-67 258.1 197 68.0
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 7.1e-67 258.1 186 66.7
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 9.2e-67 257.7 183 69.4
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 2.7e-66 256.1 205 65.4
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 3.5e-66 255.8 191 65.4
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 3.5e-66 255.8 208 63.0
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 3.5e-66 255.8 186 66.7
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 6.0e-66 255.0 183 69.4
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 1.3e-65 253.8 196 64.3
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 1.7e-65 253.4 183 68.3
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 5.1e-65 251.9 186 67.2
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 6.6e-65 251.5 200 64.0
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 8.6e-65 251.1 186 66.1
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 8.6e-65 251.1 183 67.8
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 1.9e-64 250.0 178 68.5
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 2.5e-64 249.6 183 67.8
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 3.3e-64 249.2 170 70.6
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.3e-64 249.2 218 57.8
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 3.3e-64 249.2 203 61.1
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 7.3e-64 248.1 193 65.3
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 7.3e-64 248.1 189 66.7
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 9.5e-64 247.7 208 62.0
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.6e-63 246.9 183 67.2
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 1.6e-63 246.9 197 62.4
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 2.1e-63 246.5 193 63.7
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 2.1e-63 246.5 188 65.4
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 2.1e-63 246.5 190 65.3
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.6e-63 245.7 188 65.4
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 3.6e-63 245.7 227 57.7
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 8.1e-63 244.6 188 64.4
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 1.1e-62 244.2 188 64.9
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 1.4e-62 243.8 187 64.7
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.4e-62 243.8 202 62.9
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 1.8e-62 243.4 187 65.8
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 2.4e-62 243.0 192 64.1
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.4e-62 243.0 202 62.9
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 2.4e-62 243.0 186 65.1
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 3.1e-62 242.7 197 62.4
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 4.0e-62 242.3 187 63.6
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 5.2e-62 241.9 183 62.3
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 5.2e-62 241.9 186 65.6
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 1.2e-61 240.7 186 65.6
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 2.0e-61 240.0 186 64.5
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 5.8e-61 238.4 186 65.6
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 7.6e-61 238.0 186 62.9
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 1.3e-60 237.3 201 60.2
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 1.3e-60 237.3 207 60.4
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 1.3e-60 237.3 205 59.5
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 1.7e-60 236.9 189 61.9
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.7e-60 236.9 203 58.1
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 2.2e-60 236.5 184 64.1
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 2.9e-60 236.1 171 67.3
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 4.9e-60 235.3 191 61.8
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 4.9e-60 235.3 184 63.6
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 8.4e-60 234.6 189 62.4
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 8.4e-60 234.6 203 58.1
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 1.1e-59 234.2 202 60.4
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 1.1e-59 234.2 188 62.2
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.1e-59 234.2 218 56.4
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 1.4e-59 233.8 171 68.4
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 2.4e-59 233.0 205 60.0
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 3.2e-59 232.6 188 61.7
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 5.4e-59 231.9 193 60.6
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 5.4e-59 231.9 187 62.0
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 7.1e-59 231.5 170 68.2
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 2.1e-58 229.9 183 61.2
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 2.7e-58 229.6 190 60.5
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 6.0e-58 228.4 202 58.4
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 7.8e-58 228.0 203 57.6
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 8.7e-57 224.6 184 59.8
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 5.6e-56 221.9 170 65.9
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 9.6e-56 221.1 137 76.6
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 2.1e-55 219.9 211 55.5
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 6.2e-55 218.4 237 51.5
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 2.4e-54 216.5 195 59.0
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 6.9e-54 214.9 138 74.6
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 2.9e-52 209.5 264 46.2
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 1.1e-51 207.6 182 57.1
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 2.4e-51 206.5 295 43.4
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 7.1e-51 204.9 188 55.9
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 7.1e-51 204.9 184 57.6
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 1.3e-49 200.7 188 55.3
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 3.4e-45 186.0 166 57.2
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 4.9e-44 182.2 154 59.1
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 6.4e-44 181.8 151 61.6
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 1.1e-43 181.0 149 61.7
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 6.4e-36 155.2 181 49.2
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 1.4e-35 154.1 181 49.7
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 9.3e-35 151.4 101 72.3
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 6.0e-34 148.7 181 47.5
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 9.6e-32 141.4 159 50.3
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.4e-30 136.7 92 66.3
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.2e-26 124.4 134 53.0
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 8.7e-25 118.2 77 68.8
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.9e-24 117.1 77 67.5
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 4.3e-24 115.9 77 67.5
Aa31LG5G15340 Aethionema arabicum HOM05D006992 ORTHO05D008752 6.9e-22 108.6 74 66.2
RcHm_v2.0_Chr3g0452521 Rosa chinensis HOM05D006992 ORTHO05D008752 2.5e-16 90.1 99 52.5
SGA_v2.0_scaffold243G44307 Striga asiatica HOM05D060893 ORTHO05D008752 3.3e-16 89.7 94 60.6
RcHm_v2.0_Chr1g0321781 Rosa chinensis HOM05D006992 ORTHO05D008752 2.8e-15 86.7 61 63.9
RcHm_v2.0_Chr6g0246461 Rosa chinensis HOM05D006992 ORTHO05D008752 8.2e-15 85.1 61 62.3
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 6.9e-14 82.0 215 30.7
VMungo0331G0785 Vigna mungo HOM05D006992 ORTHO05D008752 7.7e-13 78.6 77 49.4
Gohir.D03G082200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.9e-12 76.6 53 64.2
Sp3g03780 Schrenkiella parvula HOM05D000160 ORTHO05D000914 3.7e-07 59.7 74 44.6
Gorai.010G111000 Gossypium raimondii HOM05D001408 ORTHO05D001312 8.2e-07 58.5 39 61.5
Gohir.D06G096300 Gossypium hirsutum HOM05D001408 ORTHO05D001312 7.0e-06 55.5 39 56.4
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 9.1e-06 55.1 38 60.5


User provided reference genes

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