Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 4.0e-156 554.7 270 100.0
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 2.4e-100 369.4 354 57.6
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 4.9e-98 361.7 351 57.0
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 7.6e-91 337.8 259 64.5
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 7.6e-91 337.8 351 51.9
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 1.7e-90 336.7 352 53.7
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 3.8e-90 335.5 352 53.7
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 3.8e-90 335.5 380 50.0
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 5.0e-90 335.1 352 52.0
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 6.5e-90 334.7 352 53.4
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 8.4e-90 334.3 243 66.3
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 8.4e-90 334.3 258 64.3
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 1.4e-89 333.6 345 53.0
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 1.9e-89 333.2 259 62.5
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 5.5e-89 331.6 351 52.4
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 5.5e-89 331.6 352 51.7
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 5.5e-89 331.6 259 63.3
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 7.1e-89 331.3 259 63.7
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 9.3e-89 330.9 259 64.1
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 9.3e-89 330.9 259 63.7
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 1.2e-88 330.5 259 63.3
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.6e-88 330.1 259 63.7
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 2.1e-88 329.7 259 62.2
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 2.7e-88 329.3 258 63.2
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 2.7e-88 329.3 345 52.8
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 2.7e-88 329.3 352 51.7
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 3.5e-88 328.9 347 50.7
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 4.6e-88 328.6 352 51.7
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 6.1e-88 328.2 259 63.3
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 6.1e-88 328.2 352 51.4
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 7.9e-88 327.8 352 51.7
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 1.3e-87 327.0 354 50.6
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 1.3e-87 327.0 352 50.6
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.8e-87 326.6 344 52.0
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 5.1e-87 325.1 259 62.5
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 6.7e-87 324.7 258 62.8
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 6.7e-87 324.7 258 62.8
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 8.7e-87 324.3 355 50.7
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 1.5e-86 323.6 258 61.2
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 1.5e-86 323.6 259 62.5
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 1.5e-86 323.6 233 67.4
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 1.5e-86 323.6 358 49.2
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 3.3e-86 322.4 266 59.4
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 4.3e-86 322.0 259 61.4
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 5.7e-86 321.6 259 61.8
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 5.7e-86 321.6 258 61.6
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 7.4e-86 321.2 256 63.3
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 7.4e-86 321.2 258 62.0
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 9.7e-86 320.9 259 61.4
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 1.3e-85 320.5 266 59.4
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 1.6e-85 320.1 258 62.0
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 1.6e-85 320.1 258 62.0
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 1.6e-85 320.1 258 61.6
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 1.6e-85 320.1 258 61.6
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 3.7e-85 318.9 258 62.0
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 4.8e-85 318.5 284 57.7
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 4.8e-85 318.5 259 62.2
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 4.8e-85 318.5 260 60.8
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 1.4e-84 317.0 258 61.6
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 3.1e-84 315.8 258 60.5
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 3.1e-84 315.8 259 61.4
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 4.1e-84 315.5 259 60.6
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 5.3e-84 315.1 260 60.0
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 6.9e-84 314.7 258 61.2
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 9.0e-84 314.3 258 60.5
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 1.2e-83 313.9 258 60.9
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 1.2e-83 313.9 258 60.9
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 1.2e-83 313.9 264 60.2
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 1.5e-83 313.5 259 60.6
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 1.5e-83 313.5 259 60.6
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 2.0e-83 313.2 351 48.7
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 2.6e-83 312.8 258 60.5
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 5.9e-83 311.6 258 60.1
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 5.9e-83 311.6 256 61.3
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 1.0e-82 310.8 258 60.9
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 1.0e-82 310.8 299 54.8
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 1.3e-82 310.5 260 60.8
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 2.9e-82 309.3 262 58.4
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 8.5e-82 307.8 262 59.2
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 1.1e-81 307.4 268 58.6
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 2.7e-80 302.8 259 58.3
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 2.5e-78 296.2 296 52.4
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 4.3e-78 295.4 389 46.3
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 8.5e-74 281.2 245 55.9
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 8.5e-74 281.2 298 53.0
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 1.1e-73 280.8 259 53.3
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 1.1e-73 280.8 259 53.3
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 7.2e-73 278.1 228 61.8
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 2.3e-71 273.1 258 52.3
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 1.1e-70 270.8 228 60.1
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 9.7e-70 267.7 261 51.3
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 1.0e-66 257.7 232 56.0
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.6e-59 233.0 123 87.0
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 3.8e-58 229.2 209 56.0
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 1.2e-56 224.2 126 78.6
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 1.2e-56 224.2 126 78.6
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 1.6e-56 223.8 257 44.0
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 8.8e-55 218.0 358 39.4
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 2.4e-52 209.9 122 77.0
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 4.1e-52 209.1 249 42.6
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 7.0e-52 208.4 240 43.8
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 9.1e-52 208.0 122 76.2
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 2.3e-47 193.4 278 42.4
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 5.2e-47 192.2 247 40.9
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.2e-43 181.0 360 35.3
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 3.4e-38 162.9 207 44.4
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 9.8e-38 161.4 105 68.6
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 6.4e-37 158.7 255 40.8
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 2.5e-33 146.7 120 65.0
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 6.2e-32 142.1 102 69.6
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 1.8e-31 140.6 119 56.3
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 1.5e-30 137.5 78 82.1
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 5.8e-30 135.6 175 44.6
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 1.4e-28 131.0 117 60.7
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 8.6e-26 121.7 135 48.9
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 2.5e-25 120.2 102 62.7
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 6.2e-24 115.5 248 35.5
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 1.1e-23 114.8 193 40.9
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 1.1e-23 114.8 172 37.2
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 4.4e-22 109.4 110 55.5
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 4.4e-22 109.4 66 75.8
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 7.5e-22 108.6 151 39.1
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 3.2e-20 103.2 121 43.8
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 1.0e-18 98.2 78 62.8
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 6.4e-13 79.0 46 80.4
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 1.3e-10 71.2 41 73.2
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.6e-08 64.3 57 56.1
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 5.2e-07 59.3 123 32.5
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 2.6e-06 57.0 134 30.6


User provided reference genes

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