Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 3.8e-154 548.1 278 100.0
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 2.3e-114 416.0 278 78.8
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 3.4e-110 402.1 247 83.0
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 7.1e-108 394.4 234 83.8
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 7.8e-107 391.0 235 83.0
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.1e-105 387.1 278 73.4
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 1.5e-105 386.7 265 75.1
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 3.3e-105 385.6 237 81.9
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 5.6e-105 384.8 234 81.2
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 9.6e-105 384.0 274 73.7
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 2.1e-104 382.9 275 72.4
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 2.1e-104 382.9 265 74.3
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.1e-104 382.9 235 81.7
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 2.8e-104 382.5 235 81.3
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 4.7e-104 381.7 258 76.0
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 6.2e-104 381.3 265 74.7
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 8.1e-104 380.9 235 80.0
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 1.1e-103 380.6 235 81.3
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.1e-103 380.6 274 71.5
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.4e-103 380.2 235 81.3
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 1.8e-103 379.8 234 81.6
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 2.4e-103 379.4 237 81.0
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 2.4e-103 379.4 235 80.4
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 5.3e-103 378.3 235 80.9
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 5.3e-103 378.3 278 70.5
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 6.9e-103 377.9 235 79.1
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.2e-102 377.1 235 80.0
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 1.2e-102 377.1 274 68.6
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 2.0e-102 376.3 235 80.0
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.6e-102 375.9 235 79.1
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 2.6e-102 375.9 235 80.9
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 3.4e-102 375.6 235 79.1
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 3.4e-102 375.6 270 71.1
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 4.4e-102 375.2 245 77.1
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 4.4e-102 375.2 238 79.0
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 5.8e-102 374.8 237 79.3
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 5.8e-102 374.8 228 81.6
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 9.9e-102 374.0 235 79.1
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 9.9e-102 374.0 275 68.4
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 1.7e-101 373.2 237 78.9
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 1.7e-101 373.2 235 79.1
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 2.9e-101 372.5 237 76.8
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 4.9e-101 371.7 237 78.9
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 4.9e-101 371.7 237 77.6
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 4.9e-101 371.7 235 78.7
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 8.4e-101 370.9 237 78.1
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 8.4e-101 370.9 237 78.1
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 1.1e-100 370.5 234 78.6
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.9e-100 369.8 237 76.8
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 3.2e-100 369.0 267 68.9
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 3.2e-100 369.0 248 75.4
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 4.2e-100 368.6 237 76.8
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 4.2e-100 368.6 271 70.8
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 7.1e-100 367.9 237 76.8
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 9.3e-100 367.5 235 77.9
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.6e-99 366.7 237 77.6
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.6e-99 366.7 265 73.6
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 1.6e-99 366.7 235 77.0
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 2.7e-99 365.9 235 77.4
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.0e-99 364.8 278 70.5
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 6.0e-99 364.8 235 77.0
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 1.0e-98 364.0 235 77.0
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.0e-98 364.0 274 67.5
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 2.3e-98 362.8 276 67.4
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 3.0e-98 362.5 237 75.5
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 3.0e-98 362.5 274 69.0
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 8.7e-98 360.9 235 76.6
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 8.7e-98 360.9 237 73.8
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 1.1e-97 360.5 237 75.9
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.5e-97 360.1 235 74.5
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.5e-97 360.1 274 66.8
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 1.9e-97 359.8 237 73.8
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 4.3e-97 358.6 235 76.2
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 5.6e-97 358.2 252 72.6
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 5.6e-97 358.2 274 67.2
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 7.3e-97 357.8 264 68.6
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 9.6e-97 357.5 255 72.5
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 9.6e-97 357.5 278 65.5
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.3e-96 357.1 237 74.7
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 2.1e-96 356.3 272 66.9
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 2.4e-95 352.8 237 73.4
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 3.1e-95 352.4 235 75.7
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 5.3e-95 351.7 237 75.1
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 5.3e-95 351.7 237 75.1
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 5.3e-95 351.7 250 72.0
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 5.3e-95 351.7 237 70.9
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 6.9e-95 351.3 251 71.7
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 6.9e-95 351.3 237 77.6
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 9.0e-95 350.9 217 80.6
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 1.2e-94 350.5 229 77.3
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 1.5e-94 350.1 288 64.9
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 2.6e-94 349.4 261 69.3
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.6e-94 349.4 237 71.3
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.6e-94 349.4 282 66.0
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 3.4e-94 349.0 272 65.1
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 4.5e-94 348.6 237 71.7
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 4.5e-94 348.6 237 71.3
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.8e-94 348.2 281 65.1
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.7e-93 346.7 276 66.7
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 1.7e-93 346.7 248 71.0
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 3.8e-93 345.5 274 63.1
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 6.4e-93 344.7 237 70.0
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 8.4e-93 344.4 255 66.7
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 8.4e-93 344.4 255 66.7
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 8.4e-93 344.4 217 80.2
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 1.1e-92 344.0 237 70.0
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 2.4e-92 342.8 237 74.3
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 3.2e-92 342.4 237 68.8
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 4.2e-92 342.0 274 63.5
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 4.2e-92 342.0 213 78.9
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 4.6e-91 338.6 206 80.6
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 3.0e-90 335.9 272 62.1
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 8.7e-90 334.3 305 61.6
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.1e-89 334.0 213 77.5
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 3.3e-89 332.4 262 67.6
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 5.6e-89 331.6 213 77.0
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 8.1e-88 327.8 212 76.9
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.4e-87 327.0 290 58.6
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.2e-86 323.9 248 67.7
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 3.8e-85 318.9 235 70.2
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 5.5e-84 315.1 235 68.9
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 9.3e-84 314.3 235 66.4
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 6.0e-83 311.6 237 70.0
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.0e-82 310.8 204 73.0
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 2.5e-81 306.2 235 68.5
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 2.5e-81 306.2 237 65.0
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 1.6e-80 303.5 265 63.4
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 1.1e-79 300.8 274 58.0
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.4e-79 299.7 265 62.3
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.5e-78 297.0 184 82.6
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.2e-76 288.9 304 53.3
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.5e-76 288.5 206 70.4
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 9.3e-76 287.7 262 58.4
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.1e-75 286.6 227 61.7
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.0e-74 284.3 198 75.8
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 5.1e-74 282.0 237 60.8
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.9e-73 280.0 169 81.1
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 2.5e-73 279.6 237 64.6
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 5.7e-73 278.5 237 59.9
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 6.3e-72 275.0 234 59.0
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 1.2e-67 260.8 252 52.4
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 3.6e-67 259.2 236 55.9
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 6.7e-66 255.0 171 70.8
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 1.5e-65 253.8 235 55.7
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 4.3e-65 252.3 171 70.8
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 6.3e-64 248.4 146 87.0
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 4.5e-62 242.3 237 54.9
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.9e-59 231.5 207 62.3
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 1.4e-58 230.7 139 81.3
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 1.4e-55 220.7 234 49.1
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 2.9e-53 213.0 235 46.8
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 6.5e-53 211.8 187 60.4
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.8e-47 193.7 122 81.1
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.1e-47 193.0 166 62.7
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 5.7e-41 172.2 104 78.8
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 2.4e-39 166.8 105 80.0
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.9e-36 157.1 100 80.0
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.2e-36 156.4 146 61.6
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 9.1e-31 138.3 119 63.0
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 9.1e-31 138.3 119 63.0
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 1.3e-29 134.4 233 37.8
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 2.9e-29 133.3 99 71.7
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 3.8e-29 132.9 167 48.5
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 9.2e-23 111.7 82 67.1
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 9.5e-20 101.7 165 38.8
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 6.8e-18 95.5 84 59.5
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 2.6e-17 93.6 145 43.4
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 2.2e-16 90.5 267 28.5
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 2.2e-16 90.5 66 62.1
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 8.3e-16 88.6 66 68.2
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.9e-15 87.4 68 63.2
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 4.4e-09 66.2 126 40.5
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 9.2e-07 58.5 191 24.1
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 4.6e-06 56.2 35 77.1


User provided reference genes

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