Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25779 Striga asiatica HOM05D012549 ORTHO05D013546 1.1e-172 609.8 286 100.0
SGA_v2.0_scaffold199G41212 Striga asiatica HOM05D012549 ORTHO05D013546 1.3e-112 410.2 304 67.8
SGA_v2.0_scaffold80G25794 Striga asiatica HOM05D012549 ORTHO05D013546 8.3e-112 407.5 306 65.7
SGA_v2.0_scaffold80G25855 Striga asiatica HOM05D012549 ORTHO05D013546 9.5e-108 394.0 305 65.6
SGA_v2.0_scaffold94G28510 Striga asiatica HOM05D012549 ORTHO05D013546 1.2e-107 393.7 303 67.0
SGA_v2.0_scaffold80G25772 Striga asiatica HOM05D012549 ORTHO05D013546 4.6e-102 375.2 304 63.2
SGA_v2.0_scaffold98G29332 Striga asiatica HOM05D012549 ORTHO05D013546 2.3e-93 346.3 297 59.9
SGA_v2.0_scaffold98G29336 Striga asiatica HOM05D012549 ORTHO05D013546 2.1e-91 339.7 307 58.6
SGA_v2.0_scaffold98G29327 Striga asiatica HOM05D012549 ORTHO05D013546 5.4e-79 298.5 298 55.4
SGA_v2.0_scaffold386G50500 Striga asiatica HOM05D023019 ORTHO05D013546 4.7e-30 136.0 323 31.6
SGA_v2.0_scaffold386G50502 Striga asiatica HOM05D023019 ORTHO05D013546 4.7e-30 136.0 323 31.6
SGA_v2.0_scaffold189G40374 Striga asiatica HOM05D023019 ORTHO05D013546 6.3e-27 125.6 325 29.5
SGA_v2.0_scaffold56G20030 Striga asiatica HOM05D023019 ORTHO05D013546 1.4e-26 124.4 322 29.5
CANSAT21G1526 Cannabis sativa HOM05D012549 ORTHO05D013546 1.7e-24 117.5 309 30.4
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 6.8e-21 105.5 297 30.0
CANSAT78G0001 Cannabis sativa HOM05D012549 ORTHO05D013546 7.5e-20 102.1 303 27.7
QL07p036156 Quercus lobata HOM05D001729 ORTHO05D001155 7.5e-20 102.1 323 32.2
AUR62006003 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.1e-18 98.2 291 27.5
AUR62035623 Chenopodium quinoa HOM05D001729 ORTHO05D001155 2.4e-18 97.1 291 27.5
FAN19G1216 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-15 87.8 321 27.1
FAN05G1447 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-15 86.7 319 25.1
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-14 84.0 321 27.4
Ah.07g204710 Amaranthus hybridus HOM05D001729 ORTHO05D001155 3.6e-14 83.2 298 26.8
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-14 83.2 315 24.4
FAN24G2236 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-14 82.4 305 27.5
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 6.1e-14 82.4 332 25.3
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 1.0e-13 81.6 313 24.0
PSO063G7655 Papaver somniferum HOM05D008326 ORTHO05D001155 2.0e-12 77.4 269 24.9
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 2.0e-12 77.4 327 25.4
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 2.6e-12 77.0 321 24.9
Potri.011G000700 Populus trichocarpa HOM05D001729 ORTHO05D001155 3.4e-12 76.6 319 26.3
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 4.4e-12 76.3 323 26.6
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 7.5e-12 75.5 201 28.4
Sc19g0001870 Simmondsia chinensis HOM05D001729 ORTHO05D001155 4.9e-11 72.8 312 24.4
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 2.4e-10 70.5 310 25.5
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 3.1e-10 70.1 324 26.5
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 3.1e-10 70.1 338 24.3
FAN12G2239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-10 69.3 327 23.9
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 5.4e-10 69.3 150 32.0
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.2e-10 68.6 204 27.5
AUR62035625 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.6e-09 67.8 261 28.4
PSO210G0402 Papaver somniferum HOM05D008326 ORTHO05D001155 1.6e-09 67.8 217 24.4
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 4.5e-09 66.2 315 24.1
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.9e-09 65.9 315 24.1
Prupe.5G070600 Prunus persica HOM05D001729 ORTHO05D001155 5.9e-09 65.9 326 25.8
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-08 64.7 232 24.6
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 2.9e-08 63.5 327 24.2
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-08 63.2 331 23.3
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-07 61.6 228 25.0
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-07 61.2 328 25.3
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 1.9e-07 60.8 317 24.3
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 2.5e-07 60.5 158 31.6
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-07 60.5 158 31.6
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-07 60.5 158 31.6
PSO210G4092 Papaver somniferum HOM05D008326 ORTHO05D001155 2.5e-07 60.5 211 26.1
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 2.5e-07 60.5 147 32.0
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 3.3e-07 60.1 191 27.2
PSO210G3857 Papaver somniferum HOM05D008326 ORTHO05D001155 5.6e-07 59.3 145 29.0
Gohir.D10G001700 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.2e-06 58.2 135 31.1
Gorai.011G002100 Gossypium raimondii HOM05D000664 ORTHO05D000491 1.2e-06 58.2 135 31.1
FAN26G2860 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-06 57.8 323 24.1
Gohir.A10G001600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.1e-06 57.4 135 31.1
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 3.6e-06 56.6 162 27.8
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-06 56.6 162 27.8
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-06 56.2 139 29.5


User provided reference genes

Program Settings