Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25734 Striga asiatica HOM05D040281 ORTHO05D035895 4.7e-55 217.6 111 100.0
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 9.7e-08 60.5 38 84.2
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 3.7e-07 58.5 43 69.8
FAN02G0319 Fragaria x ananassa HOM05D040281 ORTHO05D035895 8.2e-07 57.4 36 75.0
FAN14G4555 Fragaria x ananassa HOM05D040281 ORTHO05D035895 8.2e-07 57.4 36 75.0
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 1.8e-06 56.2 38 76.3
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 2.4e-06 55.8 38 76.3
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 2.4e-06 55.8 38 73.7
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 4.1e-06 55.1 38 73.7
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 5.3e-06 54.7 43 67.4
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 9.1e-06 53.9 43 65.1
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 9.1e-06 53.9 53 58.5
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 9.1e-06 53.9 35 80.0
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 9.1e-06 53.9 42 66.7


User provided reference genes

Program Settings